Thunnus thynnus (Atlantic bluefin tuna): 137179570
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Entry
137179570 CDS
T11154
Symbol
rims1b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137179570 (rims1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137179570 (rims1b)
Membrane trafficking [BR:
tty04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
137179570 (rims1b)
Small GTPases and associated proteins
Rab associated proteins
137179570 (rims1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
137179570
NCBI-ProteinID:
XP_067440449
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All DBs
Position
3:13394714..13474603
Genome browser
AA seq
1531 aa
AA seq
DB search
MSASVGPQGGPRPPTAPPSMPDLPDLSHLTEEERKIIMAVMARQKEEEEKEQAMLKTLHQ
QFESYKQEVRRIGAETRRQQTQQKDDAPTCGICRKTKFADGCGHLCSYCQTKFCARCGGR
VSLRSNNVMWVCNLCRKQQEILTKSGEWFSGSGVRPGSLGTSLTDPATGGEAQRDRKLLR
SRSQAPPSTNSNTGLPDGTQPPTGVTAAKGADTMPGSRSQSEPPREKKRPVSLHEQNGKG
GMGRGSGRRPAGKLPSQSSLDERVGPGDRGERRLGDGRRLEKIHSQDYEDGEENLGRLET
HRRRPEDEEQRERQRREEEFQNRYRSDPNLARYPVKPQKEEQEMRMHAKVSKVRHERRHS
DLAINEVGLGPGEGGGGGGGGSAGEVPENRLARRGGGGEKDRKAVLENHQAYSVDRTVGV
GGGPPPAVGGVRSGPQPGGPVPPDWGPNKGRLEPGITRTPRDKGGDNLLRKDSQSSDQSE
SLRPPPPRSYKSKRGVNKRQMSISSSEEEGGSTPEYTSCEDVDMESVSEKGDWDCHPLDP
AVWHHPVTWQPSKEGDHLIGRITLSKRSAMPREAGSLLGLKVVGGKMTETGRLGAFITKV
KKGSLADVVGHLRAGDEVLQWNGKSLPGATKKEVYNIILESKAEPQVEIVVSRPIGDIPR
IPESSHPPLESTGSSSFESQKMDRPSISVMSPTSPGTLRDLPLVLPGQLSVKLWYDKVGH
QLIVNVLQAIDLPPRPDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSAEPKWNQTFLYPH
VHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDIPHWYKLQTHDVSSIPL
PQPSPYLPRRHVHGDSPSKKLQSAERNSRERERVSTLAVPEQQRPVQHRSRSVSPHREDS
CRARSRPAHVPMQRSLDEIHQNRHHSHSPSRYHDSHLEHQRSGDSDYEYSEDSEVLEMHR
SIRGGSAECLHTNSDLQPSLDRVRSASTTCLRPDTNFHSPDRDSPSRCSNSLPRKTPPRP
RILVEHVALEEDSQNRQCSNSSSPNCLRGSKKSLEGDSRIQPTSILRGSRGRGGPLRPFG
QTALAGSSTNSPRPDRAHPHCSPSSPTGTPSSGRRGRQLPQLPAKSSSIEQALAVEERAR
QLQMKVHSYRPSASHDPETDLKTKREMYAEQRRSSDNMSARSSDSDMSDVSALSRASSAS
RLSSTSYMSIQSERPGGRLSRQMRASVGRSMLKSSSVSGEIYTQERTDGSQSDTALGTVG
GGSKKRRSSLSARVVAIVGNRRSRSTSQISGPEGKSKKEKGAPIQRSTETGMAVELTRNM
SRQPSRESNNGSMNSYNSEGNLIFSGVNLGASSQFSDFLDGLGPAQLVGRQTLATPAIGD
IQIGMMEKKGQLEVEVIRARGLVQKPGSKSLPAPYVKVYLLNNGAYVAKKKTKIARKTLD
PLYQQALLFEESPQGKVLQVIVWGDYGRMDHKSFMGVAQILLEELDLSSTVIGWYKLFPP
SSLVDPTLASLTRRASQSSLDSSSGPPGVRS
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcggtggggccccagggcggccctcgcccacccaccgcgccgccatccatg
ccggatctgccggacctcagccacctcactgaggaggagaggaagatcatcatggcagtg
atggctcggcaaaaggaggaagaggagaaagaacaagccatgctaaaaacactgcaccag
cagtttgagagctacaaacaggaggtgcgtcgcattggagcggagacgcggcgtcagcag
acccagcagaaggatgacgcacccacctgcggtatctgccgcaagaccaagtttgccgac
ggctgcggccacctttgctcctactgccagaccaaattctgcgctcgctgtggaggccgg
gtctccctgcgctccaacaatgtaatgtgggtatgcaacctgtgccgtaagcagcaagag
attctcaccaaatcaggagaatggttttcggggtcaggggtgcggcctgggagcctgggc
acctctttgaccgacccagccacgggaggtgaggcccaacgggacaggaagctactccgc
tccaggtcccaagccccgccctctaccaactccaacacaggcctgccagacgggacacag
ccgcccactggtgtcactgctgccaagggtgctgacaccatgcccggctcccgctcccaa
agtgaaccacccagagaaaagaaaaggccagtttcccttcatgaacaaaatggtaaggga
ggcatggggcgtggtagtggccggaggcctgctgggaagttgccgtctcagtcatccctg
gatgagcgggtaggccccggggaccgaggagagagacggttaggagatggtcgaaggctg
gagaagatccattctcaggactatgaggatggggaggagaatttgggtcgtttagaaaca
caccgcagacgcccagaggatgaggagcagagggagcgccaacgccgtgaggaggagttc
cagaaccgttaccgtagtgaccccaaccttgcccgatacccagttaaaccacagaaagag
gagcaggagatgcgcatgcatgctaaggtttccaaggtccgccatgaacgacggcacagt
gatctggcgatcaatgaagtcggactagggcctggtgaaggaggtggaggtggtggagga
ggcagtgcaggggaggtgcctgaaaaccgtctggccaggagaggagggggtggggagaaa
gaccgcaaggccgttttggagaaccaccaagcttactctgtggataggaccgtgggggtt
ggagggggacctccacctgctgtgggtggtgtgagatcagggccccagcctgggggaccg
gtgcctccagattggggcccgaacaagggccgcctagagcctggtataacacggacacca
agggacaaaggtggggataacctgctgaggaaggactctcagagctcggaccagtcggag
tctttgcggccgccccctccacggtcatacaagagcaagcgcggagtcaacaagaggcag
atgtccatcagcagctcagaggaggagggcggctccacgcccgagtacaccagctgtgag
gacgtggacatggaaagcgtcagcgagaaaggtgactgggactgtcatcctctagatcct
gcagtgtggcatcatccagttacatggcagccatccaaagagggtgatcacctgattgga
cgtatcacgctaagcaagaggtctgccatgccccgtgaagctggctctctcctcggctta
aaagtggtaggaggaaagatgacagagacagggagacttggggccttcatcaccaaagtc
aagaaaggcagcctagcagatgtcgtgggacacctacgagcaggtgatgaggtgttgcag
tggaatgggaagtcgttgccaggagcaaccaagaaagaagtgtacaatattatccttgaa
tccaaggctgagcctcaagtggaaattgttgtttcaagacctatcggagacatcccaaga
atcccagagtcatcccaccctcctctagaatctacaggctccagttcctttgagtcacag
aaaatggaccgtccttctatatcagtgatgtcccctaccagccccgggaccctcagagac
cttcctctggtactgcctggacagctctctgtgaaactgtggtatgacaaagtgggccat
cagttgatcgtcaacgtccttcaagccatagacctgccaccccgaccagacggacgacct
cggaacccctatgtcaagatgtacttcctgcctgatagaagtgataagagtaaacgacgg
actaaaacagtgaagaagagcgccgagcccaagtggaaccagaccttcctatatccccac
gttcaccgacgggacttccgagaacgcatgctagagatcactgtctgggaccagcccagg
gtccaggaggaggagagcgaattcctgggcgagatcctgatagagctggagactgccttg
ctggatgacattcctcattggtataaactccagacgcatgacgtgtcctctatacctctg
ccacagccctctccatacctcccacgcagacacgtccatggagacagccccagcaagaaa
ctacagagtgcagagcgtaactccagggagagagagcgagtcagtacgctggctgtgcct
gagcagcagcgacccgtccagcaccgctcccgctcggtgtctcctcacagagaggactcc
tgcagggcgcggtcacgacccgcacatgtgcccatgcaaaggagtctggatgagatccac
caaaaccgccaccactcccactccccctcccgctaccacgactcccacttggagcatcag
cgctccggcgactcggactatgaatactctgaggacagtgaggtcctggagatgcacagg
tctatccgcggcgggagtgccgagtgcctgcacacaaacagcgacctgcagccatcgttg
gacagagtgaggagtgccagcaccacttgtctgagaccagacaccaactttcactcccct
gacagagacagcccctctaggtgctccaactctttgccccgcaagactcccccaagaccc
aggatcttagtagaacatgtggcccttgaggaagacagtcaaaacaggcagtgtagcaat
tcatcaagtccaaactgtctaaggggcagcaaaaaaagcctggagggggacagtcgcatc
cagcccacctctatcctgaggggcagtagggggagagggggcccactgaggccctttggc
cagacagccctggcagggtcctctactaactcgccacggccagacagagcacaccctcat
tgcagcccctcttctccaacggggactccctcatcaggtcgcaggggcaggcagctgccg
cagctccctgcaaaaagcagcagcatagagcaagctcttgcagtagaggagcgagcccga
cagctgcagatgaaagtacattcctaccggccttcagcttcccatgaccccgagacggac
ctcaagaccaaacgggagatgtacgcagaacagaggcgcagcagcgacaacatgtcggca
agatcgtcagacagtgatatgagtgacgtgtcagctctctcccgtgccagcagtgcctcc
cgcctcagtagcaccagctacatgtctatccaatcagaacgacccgggggacgactcagt
cggcagatgcgagcgtcagtgggccgcagtatgctgaagagctccagtgtgagcggggag
atctacacccaggagcgcactgacggcagccaatcagacacggcgctgggcacggtgggt
ggcggcagcaagaagagacgctctagcctcagcgcacgggtggtggccatcgttggcaac
cgtcgcagccgcagcacttcacagatcagcggccctgagggcaagagtaagaaggagaag
ggtgcacccatccagaggagcactgagaccggtatggcagtggagctgaccaggaacatg
agccgccagcccagcagagagtccaacaatggcagcatgaacagctacaactctgaggga
aatttgatcttctctggagtgaatctgggtgccagcagtcagttcagtgacttcctggat
ggactgggaccggctcagttagtgggcaggcaaacactggctacacctgccataggggac
atccagattggtatgatggagaaaaagggtcagctggaggtggaagttattagagcgcga
ggactcgtacaaaagccaggatccaaatcgctccctgctccatatgtcaaggtctatctg
ctgaataatggagcgtacgtagccaaaaagaaaaccaagattgcacggaaaacacttgac
ccactgtaccagcaagcactgctattcgaggaaagcccacagggtaaagtcttacaggtg
attgtatggggagactacggccgcatggaccataaaagcttcatgggagttgcacaaatc
ctattggaggaactggacttatcaagcacagtaattggttggtacaagttgttcccacct
tcctccttggtggatccaacgcttgcctccttaacgcggcgagcttcccagtcatcactc
gacagctcctccggacctcccggggtccgatcctag
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