Thunnus thynnus (Atlantic bluefin tuna): 137179684
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Entry
137179684 CDS
T11154
Symbol
pcdh7a
Name
(RefSeq) protocadherin-7
KO
K16498
protocadherin delta 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
137179684 (pcdh7a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tty01009
]
137179684 (pcdh7a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tty04515
]
137179684 (pcdh7a)
Protein phosphatases and associated proteins [BR:
tty01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137179684 (pcdh7a)
Cell adhesion molecules [BR:
tty04515
]
Cadherins
Protocadherins
137179684 (pcdh7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
137179684
NCBI-ProteinID:
XP_067440640
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All DBs
Position
3:18756856..18798680
Genome browser
AA seq
1374 aa
AA seq
DB search
MQRLGAVHSSAAQALSLVVLVLQLLTQLPGADSALRYRVAEEGPPDVKIGNVAADLGLTA
GTGSGDVTFALESGSEFFKIDNVTGELTTGPRRIDREKLPQCQMIFDENECFLDFEVSVI
GPLQSWVDLFEGRVVITDINDNTPSFPSPVLQLSVEENRPIGTLYLLPTATDRDFGRNGI
DRYELIQDGGAGSSSTRRTAGGNPITRVDGLGDRRGRSGDNGGAARSTVFELQVADIPDG
EKQPQLIVKGTLDREQKDSYELVLRVRDGGNPPRSSQALLRVSITDVNDNSPQFERSTYE
AEMAENAPPGTPVLQVRASDRDIGVNGQVEYVFGAATESVRRLLRLDEATGWLSVLHRID
REEVAQLRFTVMARDRGQPPRTDRTTVVLAVRDENDNVPVVEIRKIGRIPVRDGAALVPE
NVLVDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALPPLPVDEAFDRNKKKY
FLHTSALLDYEVTKEYSVTIVAVDSGSPSLSSNSSLMVRVVDINDHAPTFAQSVVEVHFA
ENNSPGERVVTVVATDADSGKNAEIAYSLDPVVNGPFYIDADNGDIRATGVLDREQRERY
ELRVIAKDKGTPSLQGSATVVVQVTDRNDNAPKFVQEIFTFYVKENLLANSPVGMVTVTD
ADEGENAELSLFVEMDGVDEKKTGEKTEGEDGEKEREEVFSIENNTGTIFSSASFDRERL
STYTFRVRAVDGGEPRKTATATVSLFVTDENDNAPSIFSPANESYTLLPPASSARTIVRT
VTATDSDTGPNAELRYALVGGNPFRLFEIGHINGVITLAEPLERRHRGLHRLVIRVNDSG
IPSLCATALVHVFINESLANATLVDAQVARSLMAPLSLDIAGDPDSERALGKQRLSVAIG
VLAGAAAVILVILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPPGAQPQAGRGGGSDRGR
KPRRDKRNGSGGSAAAGGGKSDRSLYSGIVTVNGLRRHANDDDDEDMSSASERLAARYCA
VDGDPGSPRMGGGRRHQSSPDLARHYKSSSPLPAVNLQPHSPPAEGKKHQAVQELPPSNT
FVGSGGCVGSAGSSSSSSGGSGNADAMSLGSDQCSEYGCQTGNKYSKQGTLRRVTFSVVS
QPQDGGCYDSGMEDSETPSSKSSSGPRLGALPLPEEGYERTTPEGSVGEEEHVENDARQL
PDVALTGKCTRECDEFGHSDTCWMPVRPSPRQRQRHGSDPPRLSTFTPGDDNNNLRGNDH
ESDSESAGSAGSSEPGVVISGEGQRLPLANGDPLGTLGSGDRNRNMGDHNRNLLNRKMTS
ASYDTFSSAGFGRRQQEEEGGEGQNPPEVIPLTRTGGDYKTTSCLTLSRREVYL
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggcttggtgcagtgcactcctccgcggcgcaggctctcagcctcgtggtctta
gtgctgcagctgctgactcagctaccgggtgccgactcagctctccggtaccgggtggcg
gaggagggtccacctgacgtcaagattggcaatgtggccgccgacctgggcctcacggca
ggtacaggcagcggggatgtcaccttcgctctggagagcggctctgagttcttcaagata
gacaatgtgacaggtgagctgacgacaggcccacgacgcattgaccgagagaagctcccc
cagtgccagatgatatttgatgaaaatgagtgtttcttggactttgaggtgtcagtcatc
gggccactgcagagctgggtagacttatttgaaggccgtgtggtcataacagacatcaat
gacaacaccccttccttcccctcacctgtcctccagctctcagttgaggaaaatcgccca
ataggcaccctttacctgctgcccacagcaacagacagggattttggacgaaatggcatt
gaccgctatgagctgatccaagatggtggagctgggtcaagttcaacaagacgcacagca
ggaggaaaccctattactagagtggatggacttggggaccgaagaggtagaagtggagat
aatggaggagcagccaggagcactgtgtttgaactacaagtggcagatataccagatggt
gaaaaacaaccacagcttattgtgaaaggcacattggatcgtgagcaaaaagactcatac
gagcttgtcctccgggttcgagatggggggaacccaccacgttcttcccaagccctgctt
cgtgtttccatcactgatgtgaatgacaacagcccacaattcgaaaggtcaacatatgag
gcagaaatggcagaaaatgctcctccaggtacacctgtcctccaagtcagagcttcagac
cgtgacattggagtcaatgggcaggtggaatatgtctttggagctgctactgaatctgtc
aggcgactcctgcggctggacgaggcaactggatggctgagcgttcttcacaggatcgac
agggaagaggtggctcaactgaggttcacagtaatggccagggacaggggtcagccccca
cgcactgaccgaaccacagtggttttggctgtccgggatgaaaatgataatgtcccagtt
gtagaaatcagaaagattggacggatcccagtaagagatggagcagcattagtaccagag
aatgttctggtggacacaccagtagctctggtgcaggtgtcagatcgagaccagggagag
aatggggctgtgacctgcacagttgtaggagatgtcccgttcacattgaaaccagcgggt
gaaacagcacttccacccttacctgtagatgaagcctttgacaggaacaagaaaaaatac
ttcttacacacttctgccttgctggactatgaggtcaccaaagagtacagtgttaccatt
gtggcagtagattctggaagccccagtctgtccagcaacagctcactgatggtgcgagtg
gtagacatcaatgaccatgccccaacctttgcccagagtgttgtggaggtccactttgcc
gagaacaactcacctggtgaaagggtagtcactgtggtcgccacagatgcagacagcggc
aagaacgcggaaattgcatattcactggaccctgttgttaacgggccattttacatagac
gcagataacggagatatccgtgcaaccggtgttttggaccgtgagcaacgagagaggtat
gaactccgggtaattgccaaggacaagggcacgccctctctgcaaggctctgctactgtt
gttgttcaggtgactgaccgcaatgacaacgcaccaaagtttgttcaggaaatctttaca
ttctacgtcaaagagaacttgcttgccaacagcccagttggcatggtcactgtgactgac
gctgatgaaggtgagaatgcggaacttagtctgtttgtagagatggatggagttgatgag
aagaagacaggagagaagacggagggagaagatggagagaaggagcgagaagaggtgttt
tccattgagaacaacacaggaactatcttctcctctgcatcgtttgaccgtgaaaggctt
tccacctacaccttccgtgttcgggctgtggatggaggggagccacgcaaaacagccact
gccactgtctcactctttgtgacagatgaaaatgacaatgccccttcaatcttctctcca
gccaatgagtcctacaccctccttccacctgccagcagtgcccgcactatagtcaggact
gtaactgccacagactcagacactggccctaatgcagaacttcgctatgctctggtgggg
ggaaatcccttcagactgtttgagattggccacatcaatggcgtgatcaccctggcagaa
ccgctggagcggcgccatagaggtctgcatcgccttgtgatcagggtcaatgatagtggg
atcccctctctctgtgctactgccctggttcatgtcttcatcaacgagagcttggccaac
gccaccctagtggatgcacaggtggcccgaagcctgatggctccactgtcactggacatt
gcaggggacccagacagtgagcgtgcattagggaaacaacgcctcagtgtagctattggt
gtcttagctggagccgcagcggtcatcctggtgatcctccttgtagtcacagcccggcag
tgtggagctcaaggcaagaatggctatgaggccggtaagaaggagccagaggaggatttc
ttcagtcctccaggggctcaaccacaggcaggccgtggtgggggatcagaccgtggacgc
aaacctcggcgggacaaacgcaacggaagtggcggcagtgcagccgcaggaggaggaaag
tcagacagatcactctacagtggtatcgtcacagtaaatgggctgcgtcgccacgccaat
gacgacgatgatgaggatatgagcagtgctagcgagcgcctggcagcccgctactgcgct
gtggacggtgaccccggcagcccacgaatgggcggaggcaggaggcaccagtcaagccca
gatcttgccaggcactacaaatccagctcacctctccctgcagtgaatctacagccccat
tcccccccagctgagggaaagaagcaccaggcagtccaggagctgcctccctccaacacc
tttgtgggcagtgggggttgtgtggggagtgccggctccagcagcagcagtagtgggggc
agtggcaatgctgatgccatgtccctgggatctgaccagtgctcagagtacggctgccag
actgggaacaagtacagcaaacaggggacccttcgccgggtgaccttctccgtagtcagc
caaccccaggatggcggttgctatgacagtggcatggaggactcggagacaccaagcagc
aagagttcatcagggccgcgactgggagccctgccgctgcctgaggaaggctacgagcgg
accacaccggaaggcagtgtgggggaggaggagcatgtggagaatgatgccagacagctg
ccagatgtagctctgacaggaaagtgtaccagggaatgtgatgagtttggccactctgac
acctgttggatgcccgtccgcccatcgcctcgccagcgccagcgccacggcagtgacccc
ccacggctctccaccttcaccccaggagacgacaacaacaatctccgtggtaacgaccac
gagagtgacagcgaaagcgccggcagtgcagggagctcagaaccaggggtggtcatcagc
ggagaaggtcaaagactacccttagccaacggcgatcctctcggcaccctgggtagtgga
gaccgcaacaggaacatgggcgatcacaaccgtaaccttctgaaccgcaagatgacttca
gcatcctatgacacattcagcagtgcaggctttgggaggcgccagcaagaggaggaagga
ggagaaggccagaacccacctgaggtcataccactgacgcggacaggaggggactacaag
accacgtcctgcctcacgttgtcacgccgcgaggtctacctgtga
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