Thunnus thynnus (Atlantic bluefin tuna): 137179706
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Entry
137179706 CDS
T11154
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137179706 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137179706 (zcchc7)
03016 Transfer RNA biogenesis [BR:
tty03016
]
137179706 (zcchc7)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
137179706 (zcchc7)
Transfer RNA biogenesis [BR:
tty03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
137179706 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
137179706
NCBI-ProteinID:
XP_067440692
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All DBs
Position
3:19275405..19326978
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AA seq
687 aa
AA seq
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MYCSYQDREELEDDLYQEDDRDSDGSEANSELEFRLYSQLHYSSNAGEVEEQEDKGDEGE
GQGQDSQQLEETKKTANVDGDGELECTAEIRPPSSNAVKLQQDLKKKKKKKKVEKCDKQK
KGKSDLKGQRSSLSLFEEVIVIDSGPDVISISEDDTADDDIGVCALKGRSLHQQQTSTPA
QQTSQKRRKNLIVPVAVDSSSSESDSEESESKPETDSSDSSDSSDSSDSSESSESSESSD
SDGLENWMLLGRGNQDGDQTISLNLEGGSDSNADAEEKDQDGTWLVSDKDKEAQIFNKDK
GSRIAVQRVSNRYYTGKNVQCRNCNKHGHLSKNCPEPKKLSPCFLCGTTGHVVSACPNKH
CNNCGMPGHLYDSCSERAYWHKRCHRCSMTGHFFDACPEIWRQYHITTKTGPPVKQRGED
QGRTPAYCYNCSKKGHFGHACTRHRMFNGTYPSTPFINHYDTVEDINRRQHRIKIKVKDL
KKNGFLPASSQAPLTPGPPKKKQKTSHHKNNHQPNHTPHQTPNNYKPSPSHIFFTDHNDF
TAVKSKTNEHNKYKQQESTGAGKPWKPKRPVPTSRDQLPKAKLILDEADDFPRGGGRGEN
TEKKNKRRRMKKSKKVPPEGHGDSRPDGLCWTVTGAMQGSGSKKPEGENRKKRKAAARML
ASKKKRAAPMYPTDENLFIIKQRKRNR
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtactgtagctaccaggaccgtgaggagttggaggatgatctctaccaagaagatgac
agggactctgacgggtcagaggccaacagcgagctggagttccgcctctacagccagctc
cactactcctccaatgctggagaggtagaggagcaggaggacaaaggagacgagggagag
ggacagggtcaggacagccagcagcttgaggagaccaagaagactgcaaacgttgatgga
gatggagaactggaatgcactgcagaaatcaggcctccatcatctaatgctgtcaagcta
caacaagacctgaagaagaagaagaagaagaagaaggtagagaaatgtgataaacagaag
aaggggaaaagtgaccttaaaggccagaggtcgtcattatcactttttgaggaggtcatc
gtcattgactctggccctgatgttatctccatctctgaggatgacactgccgatgatgac
ataggggtctgtgccttaaagggtcggagtttacaccagcagcagacatccaccccggcc
caacagacatcccagaaaaggaggaagaatctcatagtcccagtggctgtggactcaagc
agctcggaatctgattcagaagaatcggagtccaaacctgagactgattcatctgattca
tctgattcatctgattcatctgattcatctgagtcatctgagtcgtctgagtcatctgat
tcagacggtctggagaactggatgctcctgggtcgaggaaatcaggatggagaccagacg
atctcacttaacctggagggcgggtctgacagtaatgcagatgctgaagaaaaagatcaa
gatggtacctggttggtctctgataaggacaaggaggctcagatcttcaacaaagacaaa
ggttccaggatagcggtgcagcgagtttcaaacagatactataccggcaagaacgtccaa
tgtagaaactgcaacaagcacggacatctctccaaaaactgccccgagcccaaaaagttg
tctccctgcttcctttgtggcaccacaggccacgtggtcagcgcatgtcccaataaacac
tgcaacaactgcgggatgcctggtcacctgtatgattcctgcagcgagagggcgtactgg
cacaaacggtgtcatcgctgcagcatgacgggtcacttctttgacgcttgtccagagatc
tggagacagtaccacatcacgactaagacaggtcctccagtgaagcagcggggagaggac
cagggtcgaacccccgcctactgctacaactgctccaagaaaggtcactttggccatgcg
tgtacacgacacagaatgtttaatggaacgtatcccagcaccccattcatcaaccattat
gacaccgtggaggacatcaaccgcagacaacacaggataaagattaaggttaaagacctg
aagaaaaatggctttctccctgccagctctcaggcccctctcactccaggaccgccgaag
aagaaacagaaaaccagccatcacaaaaacaaccaccaacctaaccatacacctcatcaa
acccccaacaactacaaacccagccccagccacatcttttttactgaccacaatgacttt
actgctgtgaaatctaaaacaaatgagcacaacaagtacaaacagcaggaaagcacgggt
gcagggaaaccgtggaaacccaagagaccggttccgacctcgagagaccagctcccaaaa
gctaaactaattttggatgaagcggatgactttcccagagggggaggcagaggagagaac
acagagaagaagaataagagaaggaggatgaagaaatcgaagaaagttcctccagaggga
cacggagatagcagaccagacggtctgtgctggactgtaactggggcgatgcaggggtcg
gggtcaaagaaaccagaaggagaaaacagaaagaagaggaaagctgctgcccgcatgttg
gctagcaaaaaaaaacgtgctgcaccgatgtacccaactgatgagaacctgtttattata
aaacaaaggaaacgcaacagatag
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