Thunnus thynnus (Atlantic bluefin tuna): 137179890
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Entry
137179890 CDS
T11154
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137179890 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tty03021
]
137179890 (smarca5)
03036 Chromosome and associated proteins [BR:
tty03036
]
137179890 (smarca5)
Transcription machinery [BR:
tty03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
137179890 (smarca5)
Chromosome and associated proteins [BR:
tty03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
137179890 (smarca5)
RSF complex
137179890 (smarca5)
WICH complex
137179890 (smarca5)
B-WICH complex
137179890 (smarca5)
NORC complex
137179890 (smarca5)
BRF complex
137179890 (smarca5)
NuRF complex (fruit fly)
137179890 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
137179890
NCBI-ProteinID:
XP_067441046
LinkDB
All DBs
Position
3:24643099..24652612
Genome browser
AA seq
1054 aa
AA seq
DB search
MSESANCVEQREEPTELEEAGGAELLGNVEEGSKRDPFSTFFQEKSDSSDAGKESSSDAG
PDGQDASSSSSTKTKDSTPGYEEKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLK
MKPGRPRIKKDEKQNLLSAGDNRHRRTEQEEDEELLNESTKTTNVCTRFDESPSYVKTGK
MRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTIALLGYMKHYRNIPGPHMVLVPKS
TLYNWMNEFKRWVPSLRAVCLIGGRDERTALIRDVLLPGEWDVCVTSYEMLIIEKAVFKK
FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVF
NSSEDFDSWFDTNNCLGDQKLVERLHTVLRPFLLRRIKADVEKTLLPKKEIKMYVGLSKM
QREWYTKILMKDIDILNSAGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLV
VNSGKMVVLDKLLPKMKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQ
ISINAYNEPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQ
KQVRVFRFITENTVEERIVERAEMKLRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGAT
HVFASKESEITDDDIDVILEKGERKTMEMKEKLSNLGESSLRNFTMDTENSSVYTFEGED
YREKKKVITNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPP
RLFELLEKEILFYRKTIGYKVPRNPDMPNSAQVQKEEQAKIDEAEALTEEELEEKENLLQ
QGFTIWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEK
IMAQIERGEARIQRRISIKKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML
HKLGFDKESVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEERE
KAEKKKRGPKSGSAQKRKSEGTPDGRGRRKKLKL
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagcgcaaactgcgtggaacagcgggaagagccgacggaacttgaagaagct
ggaggagcggagttgttgggaaatgttgaagagggctcaaaaagagaccccttttcaacc
ttctttcaggagaagtctgactcctcagatgctggaaaagagtcttcttcagatgccggg
cctgatggccaagatgcatcctcctcctcttcaaccaaaactaaagattctactccaggt
tatgaggagaaagtgcaaacagaccggaccaacagatttgagtacctgttgaagcaaaca
gagttatttgctcatttcatccaaccagctgcacagaagactcctacctcccccctgaag
atgaaaccaggacgtcctcgcatcaagaaagatgagaagcagaacctgctgtctgctgga
gacaatcgccatcgccgcacagagcaagaggaggatgaagagcttctgaatgagagcacc
aagaccactaacgtctgcactcgctttgacgaatctccgtcctatgtcaaaacaggaaaa
atgagggactatcaggtccgtggtctgaactggctcatctctttgtatgaaaatggaatc
aacggcatccttgctgatgaaatgggtttgggaaagacactccaaactattgccttgctg
ggttatatgaagcactacagaaacatccctggaccccacatggtgctggtgccaaagtcc
accctctacaactggatgaatgagttcaagcgatgggtgccctcgctccgtgcagtctgc
ctgattgggggcagagatgagaggactgccctgatcagagatgttctgctgccgggagaa
tgggatgtgtgcgtcacatcctatgagatgctcatcattgaaaaggcagtgttcaagaag
ttcaactggagatacctggtcattgatgaagcccacaggatcaaaaatgagaaatcaaag
ctgtcagaaattgtacgagaatttaagaccaccaatcgtttgctgctgactggaacaccc
ctgcaaaacaacctccatgagctgtgggccctgctgaacttcctgctgcctgatgtcttc
aactcatcagaggactttgattcctggtttgacacaaacaactgcttgggtgatcagaag
ttggtggagcgtcttcacactgtgctgcgtcctttcttgcttcgtcgtataaaagctgat
gtggagaagacactgctcccgaaaaaagagatcaagatgtatgtgggcctcagtaaaatg
caacgagaatggtacacaaagattctgatgaaggacattgacattctgaactcggcgggt
aagatggacaagatgcggctgctgaacgttctcatgcagctgaggaaatgctgcaaccat
ccatacctgtttgacggagctgaaccaggtccaccctacaccacagacctccacctggtg
gtgaacagtggcaagatggtggtgctggataagcttctacccaagatgaaggaacagggc
tcccgtgtgctcatcttcagtcagatgaccagggtgctggacatcttggaggactactgt
atgtggagaaactacggctattgtcgtctggatggtcagacgccacatgaggagcgacag
atctctatcaatgcatacaatgagcccaacagcagtaaattcatcttcatgttgagcacc
agagctggtgggttgggtatcaatctggctacagctgatgtagtcatcctctacgactca
gactggaaccctcaagtcgaccttcaggccatggaccgagctcacaggattggtcagcag
aagcaggtacgcgtgtttcgcttcatcactgaaaacacagtggaggagaggattgtggag
agggccgagatgaaactgcgcctggactctattgtcatccagcaaggaagacttgtggat
ccaagtgcaaacaagctgggcaaagatgagatgctttccatcatccgccacggtgccacg
catgtgtttgcctccaaagagagtgagatcacagatgatgacattgatgtaatcctagag
aagggtgaaaggaagactatggagatgaaggagaagctgtctaacctgggtgagagctct
ctgagaaacttcaccatggatacggagaacagcagcgtgtacactttcgaaggagaagac
tacagagagaagaaaaaggtcattaccaactggattgagccacccaagagagaaaggaaa
gccaattatgctgtggatgcatacttcagagaagctcttcgagtcagtgagcccaaagca
cccaaggctcctcgtccccccaagcagccaaatgtccaggacttccagttcttccctcca
cgtctttttgagcttctagaaaaggaaattctgttctacagaaaaaccataggctataag
gttccccgtaatccagacatgccaaactcagcccaggtccagaaagaggagcaggctaag
attgatgaggctgaggccctgacagaggaagagctggaggagaaggagaaccttctgcaa
cagggatttactatttggaacaaacgcgacttcaaccagttcatcaaagccaacgaaaag
tggggaagagatgacattgagaacattgccagagaggttgagggaaaaactccagaggaa
gtcatggaatattctgctgtattctgggagcgctgcaatgagctacaggatattgagaag
atcatggctcagatagagagaggagaggccaggattcagagaaggattagtattaagaaa
gcactggactcaaagatcggtcgctacaaggccccattccatcagctccgaatctcctat
ggcaccaacaaaggcaagaactacacagaggaggaggaccgcttcctcatctgcatgctc
cacaagctgggcttcgataaggagagcgtgtacgacgagctgcgtcagtgcatccgcaac
tcacctcaattccgctttgactggttcctcaaatccaggactgccatggagctccagagg
cgatgtaacaccctgattacactgatagagagagagaacatggagctggaggagagggag
aaggcagagaaaaagaaaaggggtccaaagagtggctcagcccagaaacggaagtctgag
ggaactccagatggtcgtggacgcaggaaaaaactcaagttgtga
DBGET
integrated database retrieval system
