Thunnus thynnus (Atlantic bluefin tuna): 137180260
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Entry
137180260 CDS
T11154
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137180260 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tty03021
]
137180260 (taf5l)
03036 Chromosome and associated proteins [BR:
tty03036
]
137180260 (taf5l)
Transcription machinery [BR:
tty03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
137180260 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
137180260 (taf5l)
Chromosome and associated proteins [BR:
tty03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
137180260 (taf5l)
STAGA complex
137180260 (taf5l)
TFTC complex
137180260 (taf5l)
SAGA complex
137180260 (taf5l)
SLIK complex
137180260 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
TFIID_NTD2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
RMC1_N
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD40_like
PEP5_VPS11_N
PROPPIN
Nbas_N
Beta-prop_NWD2_C
Beta-prop_IP5PC_F
WD_LRWD1
Beta-prop_ELP1_1st
Lysis_col
Motif
Other DBs
NCBI-GeneID:
137180260
NCBI-ProteinID:
XP_067441662
LinkDB
All DBs
Position
3:34928035..34934271
Genome browser
AA seq
600 aa
AA seq
DB search
MKRVRTEQIQYAVAQYLKRRQYVDTEASLKGAKLFQSAEEMAASLTVQTESGCANIVSAA
PCQSDPQQYETQYSRLRSFLSETEISWAKEVSSILYPLFVYLHLDMVRCGLKGAVDGFYS
RFHGAFLQDSEQRATVEQLRHVLTAQDVAANPKLSAFLEHKYVVHLTEPAYSYLLRYLQS
EDNSALCRALSTHLQVEVTASRRTDYQLYGAAGGATAAPNSTSSWAGVDGADGGEGVDVP
AGIPQSEAALEALQDCIKKVREGPPSLTTVCFYAFHHTEQLLNTAEVSADSRLLAAGFDS
STVKLWSLRARKLKAKPHQADVSHIHLACDVLEEEVDEEDGSGSEIKTLRGHSGPVFRTA
FLTDSSGLLSCSEDTTIRYWDLGSFTNTVLYQGHAYPVWDVDVSPCSLYFASGSHDRTAR
LWTFSRTYPLRLYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRG
PVLSLAFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVTSLSFSPDSSLVASSS
MDNSVRVWDIRNSHGGTPADGSSSELVGLYTGNTSNVLNVQFMACNLLLVTGTAQEKAEQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggttcgcacggagcagatccagtatgccgtggctcagtacctgaagcggagg
cagtatgtggacactgaagcctccctgaaaggagccaaactcttccagtcagctgaggag
atggctgccagcctcacggtgcagacagagtcgggttgtgccaacatcgtctctgctgca
ccctgccagtccgacccgcagcagtacgagacgcaatactccagactgcgctcttttctg
tcagaaacagaaatatcctgggcgaaggaggtgagcagcatcctctacccgctcttcgtc
tacctccacctggacatggtgcgctgcggcctgaagggggcagtagatggtttctacagt
cgtttccacggcgcctttcttcaggacagtgagcaacgcgccactgtggagcagctgcgg
catgttctcactgctcaggacgtagcagccaaccccaagctgagtgctttcctagagcac
aagtacgtggttcacctgacggagccggcctacagctacctgctgcgctacctgcagagc
gaggacaacagcgccctctgcagggccctcagcacgcacctgcaggtggaggtcaccgcc
tccaggcgtacagactaccagctgtacggagcggccggtggggcgaccgccgccccgaac
tccacctcctcctgggcgggagtggacggggcggatggtggggaaggggtggacgtccct
gcagggatcccgcagagcgaggcggccctggaggctctgcaggactgcatcaagaaggtc
cgcgagggccccccctcgctcaccaccgtgtgtttctacgccttccaccacacggagcag
ctgctgaacaccgccgaggtctccgccgacagccgactgctggccgccggcttcgacagc
tccacggtgaagctgtggagcctccgagccaggaagctgaaagctaaaccgcatcaggcc
gacgtgtcgcacatccacctggcatgtgacgtactggaggaggaagtggacgaggaagac
ggctccggcagtgagataaagacgctgcgaggtcatagcggtccggtgtttcgcaccgcc
ttcctgacggacagctccggcctgctctcctgctccgaggacacgaccatccgctactgg
gacctgggcagcttcaccaacacggtgctctaccagggacacgcctacccggtgtgggac
gtggacgtcagcccctgcagcctctacttcgccagcggctcccacgaccgcaccgcccgc
ctctggacgttctcccgcacctacccgctgcgtctctacgccgggcatctcgccgacgtc
gattgcgtcaagttccaccccaactccaactacctggccaccggctccacagacaagact
gtccggctgtggagcacccagcagggggcgtcggttcgcctcttcacaggccaccgcggc
ccggtgctgtcgctcgctttctcacctaatgggaagtacctagcgtccgccggcgaggac
cagagagtaaagctttgggatttagcatcggggacgttgttcaaagacctgcggggacac
acagacagcgtcaccagcctgtctttcagcccggacagcagcctggtggcgtcgtcgtct
atggacaactcggtcagggtgtgggacatcaggaactcccacggcgggacgccagctgac
ggctcgtccagcgaactggttggactgtacactggaaacaccagcaacgtgttgaacgtc
cagttcatggcctgcaacctgctgctggtgacaggaactgctcaagagaaagcagaacag
tag
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