Thunnus thynnus (Atlantic bluefin tuna): 137180393
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Entry
137180393 CDS
T11154
Symbol
fn1b
Name
(RefSeq) fibronectin 1b isoform X1
KO
K05717
fibronectin 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04510
Focal adhesion
tty04512
ECM-receptor interaction
tty04518
Integrin signaling
tty04810
Regulation of actin cytoskeleton
tty04820
Cytoskeleton in muscle cells
tty05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137180393 (fn1b)
04518 Integrin signaling
137180393 (fn1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137180393 (fn1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137180393 (fn1b)
04810 Regulation of actin cytoskeleton
137180393 (fn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
137180393 (fn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137180393 (fn1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tty04147
]
137180393 (fn1b)
00536 Glycosaminoglycan binding proteins [BR:
tty00536
]
137180393 (fn1b)
04990 Domain-containing proteins not elsewhere classified [BR:
tty04990
]
137180393 (fn1b)
Membrane trafficking [BR:
tty04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
137180393 (fn1b)
Exosome [BR:
tty04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
137180393 (fn1b)
Glycosaminoglycan binding proteins [BR:
tty00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137180393 (fn1b)
Domain-containing proteins not elsewhere classified [BR:
tty04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
137180393 (fn1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
Fn3_PBP1
fn2
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
Interfer-bind
Fn3_ROS1
NDNF
FN3_Tor_3rd
DUF4945
IL3Ra_N
Motif
Other DBs
NCBI-GeneID:
137180393
NCBI-ProteinID:
XP_067441837
LinkDB
All DBs
Position
1:complement(13177436..13199196)
Genome browser
AA seq
2457 aa
AA seq
DB search
MTGSPLTGLLVALCVSSAVHGLPKTKRQTGQYQVYPVLRDAATPVGCEENGRSYRPNEQW
EKPYRGSTLVCTCNGAAGIKCKSKPAVEESCYDKHNDRTYRVGDTYERPKDGMIWDCTCI
GSGRGKISCTIANRCHEGGRSYKIGDTWQRPHDTADYMLECVCLGNGKGEWTCKPVAERC
YENNAATSYVVGETWEKPYQGWMMLDCTCLGEGNGRITCTSRNRCNDQDTRRSYRIGDTW
TKSDTSGHALQCLCLGNGRGEWKCERHNAGRATGTGTSVLTTAHAQPQPQPEPPIEGTCR
TDSGATYYDGQRWIRSQGSKQMLCTCLGNGVSCQEWEGRNQVYGGNSDGKPCEFPFVFNG
KTYYSCTSDGRTDGQLWCSTSSDYDREQQYSFCTERNAIVATRGGNSNGALCHFPFLYSG
RNYTDCTADGRRDGMRWCGTTYNYDTEQRFGFCPMAAHEEVCTTNDGMMHRVGDKWDKRH
DVMGHMMECTCLGNGRGEWSCIAYSQLRDQCIVDGLNYEVNQEFSKRHDEGYMMNCTCYG
QGRGRWKCDAIDQCQEPQTRTFYQIGETWDKAIHGIQYRCYCYGNGIGEMRCEPQRSSPD
GHGPIQLIITEAGKQPDSHPIQWNPPSSVHITQYILKWRIKNTRAPWKEVTIPGHLNSYT
IGGLRPGVTYEGQLISILRYGRREVTRFDFTTTHGSLETSEGETTPPPPVVDTSESVTEI
TSNSFVVSWTSASATISGFRVEYELSEDGAKPKVLDVPRTATSVTLSDLLPGRRYNVNVY
EVPDQGEPNLILTTSQTTAPDTPGQHAVDDVGESSIRISWSRPQAPITGYRVVYTPSVEG
SSTELTLPDSETSVTLVDLRPGLLYNISIYAVEEEQESEPIFVQVTTAGNPQPEEVQAPT
DLQFYEVSDVKITITWTGPPSEVTGYRVNFSPVGSDGTDTRPLQLPISPNAYAELTHLQP
GTLYRFYIYAINDGVESKPLVGEKLTKPDAPTDVRFTDVGSDSAKITWEAPRAIVSGYRL
FLSIEGSSPIEKRIPGRVTQFPLRNLRPDTQYTAILHSELDNELSEGVTTYFTTAPEIGN
APPFSTEVTDTSIIVTWIPVRKFSYKLSVLPSQEGESPREETADSGRVFVSGLIPGTEYT
YSVQPIFNGRNRGKPITRNVVTSLAPPTDLRVESSPDTGDLTVHWVASRTPGITGYRVTS
TPTNGQRGNSLEEFVRADQTSVVLENLNLGVEYNVSVFTSKGHLESVPVSTIITPDIPPP
SHIDFVDITDTTIGLRWIPLSYPTITDYRIMVVTSGESLPIFQDTVEASAGYYTIRGLEP
GVDYDISIFTVTEEGESKPTTHTKQTQAAIPAPTNLQFRGVGPDHIRVTWTVPHVATPSD
ISRFVIRYHPVSTDDDIKEVNVGGATNTFVLQNLLPNTEYRISVVCVYGERESEPATGTQ
STTLDSPTGLDFSEIQTNSFTVHWLAPTAVITGYRIRYQKTSGGQAKDVRLSPTRTHYTL
TGLAPETEYLVSVYAFNNNQESQPLTGTQATISDAPTDLEVTSSSPTSITIRWDAPSVAV
KYYKITYGGAGGETPKEFTVQAPQTTATITGLKPGTDYTITVYAVTGRGDSPASNTPVYI
THKTDIEPPTDMKVTDVSDNAITVRWSPAQGPIKGYRITSVPRNGLGPSYSEVVAPDQRE
MTFTGLMPTVEYVVSVYALGTDDQPSSAAVENVVTAMDGPKDLAFSDIDSTSMRITWDSP
EGSVTSYRVLYSSSEEGERELHPAPRSNQDSVVLRGLRPGTEYTVKVIALHDRIPSKPLV
GTQATVIPAPTNLAISEVGPSSFTVSWRAPTARLSGYRVVVRPKNINAPTKEMNVAPDTT
RVIVPGLMVATTYHIEVYALKNSVTSRPVEGEATTLEDVSPPRRVRISDVKDTSFTLTWR
TKTETITGFLIDATPQGASRPTITRTVPGDANTYTLTGLQPGTSYTVNLYTLNGNTRSAP
FTLTLKTAEPVVQAPTNLQFTSLTPTSISFTWQPPATHITGYYITYEQAGGAPRELTPRP
HAGQNYATISGLRPATEYIIKIIAIQNTLRSGPLVGKIRTQPESLLPLPLPPRHGSGDGR
LDVPDIDNTVQVVGNNGQDGHSGQSGHVEYTEYNNNGESGNPQSPYGQVREPLVFVPLPD
AEGRRLPIVKLNVPIGVPFHNVTGVPQEVQTQTTLSWKPYSQSSAYLVSCSPITHTNEKM
FQIRLPGTATTATLIGLTPGANYNVLVEALKGALKHKILEQIITAGNTIPEGVPSDKDSC
YDAFTSTYHDVGSEWERMSDTGFKLWCTCLGLGSGHFRCDSSKWCHDSGNNYRIGEKWDR
QAENGHLMSCTCLGNGKGEFKCEPHDSVCYDDGKTYQVGNQWQKEYLGAICTCTCFGGQQ
GWRCENCRRPGTDVDASLLQPVRYGDNTLRKLNIHCPIECLRPDLLADAHVPQIPRE
NT seq
7374 nt
NT seq
+upstream
nt +downstream
nt
atgactggtagcccacttacagggttgctggttgcgctgtgcgtcagcagcgcagtccac
ggcttgccaaagaccaaaagacaaactggccaatatcaagtgtatccagtgctcagggac
gccgctactccggtcggatgtgaggaaaacggtcgctcatacagaccgaacgagcagtgg
gagaaaccctaccgtggaagtacactggtgtgcacctgcaatggagcagcaggcatcaaa
tgcaaatcaaagcctgcagtggaggagtcgtgttatgataagcacaatgaccggacatac
cgggtcggtgacacctacgagagaccaaaggacgggatgatttgggactgcacctgtatc
ggttctggtcgtggaaagatcagctgtaccattgcaaatcgttgccatgaaggtggaagg
tcttataaaatcggggacacttggcagaggcctcatgacactgctgactacatgctggag
tgtgtttgtcttggaaatggcaaaggagagtggacctgcaaacctgtggctgagcgttgc
tacgaaaacaatgcagcaacatcatacgtcgtgggggagacctgggagaaaccgtaccaa
ggctggatgatgctcgactgtacctgtctgggagagggaaatggacgcatcacatgcacc
tcaaggaaccgttgcaacgaccaggacaccaggaggtcctaccgaattggagacacgtgg
acaaagagtgacacaagtggacacgccctgcagtgcctgtgcttaggaaatggtcgtgga
gagtggaagtgtgagagacacaacgcaggtagagccacaggtacaggtacttccgtgttg
accaccgcccatgcccagcctcagccgcagcccgagcctcccatcgagggaacctgccgc
acagactccggagccacctactacgatggacagcgctggatcagaagccagggcagcaag
cagatgctctgcacctgtctgggcaacggagtcagctgtcaggagtgggagggcaggaac
caggtgtatggtggcaactccgatggcaagccgtgtgagttcccattcgtcttcaatggg
aagacctactactcctgcacctcagacggacgcacagacgggcagctctggtgctctact
tcctcagactatgacagagaacagcagtactctttctgtactgaaaggaatgctattgtg
gcgacacgaggtggcaactccaacggtgccctgtgccacttccccttcctctatagtggc
cgcaactacactgactgcactgctgacgggcgccgtgatggcatgaggtggtgtggtacc
acctacaactacgacacagagcagcgctttggattctgccctatggctgcccatgaggag
gtgtgcaccaccaacgatggaatgatgcaccgtgtaggcgacaagtgggacaaacgccat
gatgtcatgggtcacatgatggagtgcacatgcctcggcaatggacgtggggagtggagc
tgtatcgcttactcacagctgcgagatcagtgtattgttgatggcttgaactatgaagtg
aaccaggaattctccaagcgccacgatgagggctacatgatgaactgcacctgctatgga
cagggacgtggacgctggaagtgtgacgctatcgatcagtgccaggagccacaaacaaga
acgttctatcagattggagagacatgggacaaagctatccatggcatccaataccgctgt
tattgctatggcaacgggattggagagatgagatgcgaaccccagcggtcctccccagac
ggccacggacctatccagctgatcatcacagaggcaggaaaacagccagactcccacccc
atacagtggaaccccccttcatctgttcacattacccagtacatcctgaaatggagaatt
aaaaatacccgcgctccctggaaggaggtgaccatccccggccacctcaactcctacacc
atcggcgggctgcgtccaggtgtcacctatgagggtcagctgatcagcatcctacgctac
ggacgccgtgaggtcacacgtttcgatttcaccactacccatggttctttggaaacatcg
gagggagagacgaccccgcctcctccagtggtggacacttctgagtcggtgacagaaatc
acctctaacagctttgttgtgtcctggacgtcagcctcggccaccatctccggcttcaga
gtggagtatgagctcagtgaggatggggccaagccaaaggttttggatgttcctcgcaca
gccacctctgtcaccctcagtgacctcctgccaggacgcagatacaacgtcaacgtctac
gaggtcccagatcagggagagccaaacctcatcctgaccacctcgcagacaacagctcct
gacacccctggacagcatgctgtcgatgacgtgggagagtcatcaatccgaatcagctgg
tccagacctcaggctcctattactggctaccgtgtcgtgtacacgccatcagtggaaggc
agcagcactgagctaaccctgccagactccgagacctcagtgaccctggttgaccttcgc
cctggtctgctttacaacatcagcatctatgctgtggaggaggaacaggagagtgagcct
atttttgtgcaggtcaccactgctggaaaccctcaaccagaggaggtccaagcacccaca
gatctacagttctacgaggtttcagatgtgaagatcaccatcacctggactggcccaccc
agtgaggtgaccggttacagggtgaacttctcccccgttggttctgatggcacagacacg
aggcccctgcagctgcctatctcacccaacgcatacgctgaattaacccacttgcagcct
ggcacactgtaccgcttctacatctatgccattaacgatggagtggagagcaagccactt
gtgggagagaagttaaccaaacctgatgctcccaccgatgtgcgttttactgacgttggc
tctgacagcgcaaaaatcacctgggaggctccccgtgccattgtatctggctatcgtctt
ttcttgagcatcgagggctccagccccatcgagaagaggatcccgggcagggtcacccag
ttccccctgaggaatttgcgtccagacacccagtacactgccatcctgcactctgagctg
gacaatgagctcagtgagggtgtcactacatatttcaccacagcacccgagattggaaat
gctcctcctttcagcactgaggtcactgatacctctatcattgtcacctggatacctgtc
cgcaagttcagctacaagctatctgtgctccccagccaggaaggcgagtctcccagagaa
gagaccgctgactctggacgtgtttttgtgtctggtctgattcctggaactgagtacacc
tacagtgtccagcccattttcaatggacgcaaccgtggaaagcccatcacccgcaatgtt
gtgacttctctggctcctcccactgacctgagagtggaatccagtcccgacacaggagat
ctcactgtccactgggtagcctccagaacaccaggcatcacaggctacagagtgacaagc
acaccaaccaacggccagcgaggaaactccctggaagagtttgtcagggctgatcaaacc
tcagtcgtgctagagaacctaaatcttggggtggagtacaatgtcagtgtgttcacttcc
aagggccatttggaaagtgtgccggtgtccactattatcaccccagacatacccccacca
agtcatattgactttgtcgacattactgataccaccattggcctgcgctggatccctctg
agctatcctaccattactgattaccggataatggtagtgacatcaggggaaagcttgcca
atttttcaagatacggtggaggcatctgctggttattacacgattcgtggtttggagccg
ggtgtggactatgacatcagtatcttcactgttacagaagagggagaaagcaagccgacc
acacacacaaagcaaacacaagctgcgattcccgctcccaccaacctgcagtttaggggg
gtgggtcctgaccacatcagggtgacatggacagtcccccatgttgccacgccaagtgac
atctctcgttttgtcatccgctaccaccctgtgtccactgatgatgacatcaaggaggtt
aatgtgggtggagccaccaacaccttcgtcctgcagaacctgcttcccaacactgagtac
cgcatcagtgttgtgtgtgtgtacggtgaacgagagagtgaaccagccacaggaactcag
agcacaactctggattctcctactggcttggacttctctgaaattcagaccaactccttc
accgttcactggctggctcccactgccgttatcactggctaccgcatccgctatcagaag
acaagtggcggacaggccaaggatgtgaggctgtccccaaccaggacccactatactttg
actggactggcaccagagacggagtacctagtctctgtgtacgctttcaacaacaaccag
gagagtcagcctctgactggcacacaggccaccatctctgatgctcccactgacctggag
gtaacatcatccagccctaccagcatcaccattcgctgggacgctccctctgtcgcagtg
aagtactacaagatcacctatggaggggcaggtggtgagactcccaaagagttcacagtg
caagcccctcagaccactgccactatcactggtctgaagcctggtactgactacaccatc
acagtctatgctgttactggaagaggggacagtcccgcctccaacacccctgtctacatc
acacacaagactgatattgagcccccaaccgacatgaaggtgaccgatgtgagtgacaac
gccatcacagtgcgctggtcccctgctcagggacccatcaaagggtacagaatcaccagt
gtccccaggaatggcctgggaccctcctactctgaggtggtggcacccgatcaaagagag
atgacgttcacaggactgatgcccactgttgagtatgttgtcagtgtctacgccctgggc
acagatgatcaaccctcttctgctgcggtggagaatgtcgttaccgctatggacggtcct
aaggacctggccttctctgacattgactccacctccatgcgcatcacatgggacagtcca
gaaggctcggtgacatcgtaccgtgtcctgtactccagctcagaggagggcgagagggag
ctgcatccagcacccagaagcaaccaggacagtgtggtgctgagaggccttcgccccggc
acagagtacaccgttaaagtcattgctctccatgaccgcatacccagcaagccattggtg
ggaacacaggccacagtaatccctgctccgaccaacctggccatctcagaggtcggtccc
tcctccttcactgtgtcatggagagcccccactgcacgcctgtcaggataccgtgtggtt
gtcaggcctaagaacatcaatgcccccaccaaggagatgaacgttgctccagacaccaca
cgcgtcattgtaccagggctcatggtggcgaccacataccatattgaagtctatgctcta
aagaactctgtgacaagcaggccggtggagggagaggcgaccacactggaagatgtaagt
cctccgaggcgtgtgcgcatctctgatgtgaaggatacctctttcacactaacctggcgc
accaagacagaaaccatcactggtttcctcattgatgccacgccacaaggtgcctcacga
cccaccatcaccaggaccgtcccaggagacgcaaacacctacactctcacagggctgcag
cccggaacctcatacaccgttaacctgtatacgctgaatggcaacacaaggagtgccccc
tttacactcactcttaaaacagctgaaccagtggtccaggctcccaccaacctccagttc
acatctctgactcccacctccatctccttcacctggcagcctcctgccacacacatcaca
ggatactacatcacctacgagcaggcaggaggagcaccacgagagctcaccccacgccct
cacgctggtcaaaactacgccaccatatctggcctgagaccagccacagagtacatcatc
aagatcatcgccattcagaacacactgagaagcggacctctggtgggcaaaatcaggact
caaccagaatccctgcttcccctgcctctgcccccacgccatggaagcggtgatggcagg
ctggatgtgcctgatatcgacaacacagttcaggtagtgggcaacaatggccaggatggg
catagtggtcagagcgggcatgtggagtacacagagtacaacaacaatggagaaagtggc
aacccacagtcaccctatggtcaggttcgtgagcccctggtctttgtgcccctccctgat
gcagagggccgcaggctgcccattgtgaagctgaatgtacccattggcgtcccatttcat
aacgtgacaggagtgccacaggaggttcaaactcagaccaccctttcctggaagccatac
agtcagagcagcgcctacctggtctcctgcagtccaatcacacacacaaatgagaagatg
ttccagatacgcctgccaggcacagccaccaccgctaccctgattggactgacccctgga
gcaaactataatgtgcttgtggaggctctgaagggggcactcaaacacaagattctggag
cagatcatcactgccggaaacacaatccctgagggagtgccatccgataaggactcatgt
tatgatgcctttacctcaacctaccatgatgttggttctgagtgggagcggatgtctgat
acaggcttcaagctgtggtgcacatgcctgggcttgggcagtggccacttcagatgtgac
tcctctaagtggtgccatgacagcggcaacaactatcgcattggagagaagtgggaccgc
caggcggagaatggtcacttgatgagctgcacttgcttgggaaatggcaaaggagagttc
aagtgtgaaccacatgactctgtgtgctacgatgacggtaaaacataccaggtgggcaac
cagtggcagaaggagtacctgggtgctatctgcacctgcacatgctttggaggacagcag
ggctggcgatgtgagaactgccgcagaccaggtactgatgtagatgccagtctgctgcag
cctgttagatatggagacaacacactgcgcaaactgaatattcattgccccattgagtgt
ctgcgccccgacctgctggcagacgcacacgtcccccaaattcctcgggaataa
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integrated database retrieval system
