Thunnus thynnus (Atlantic bluefin tuna): 137180417
Help
Entry
137180417 CDS
T11154
Symbol
slc8a1a
Name
(RefSeq) sodium/calcium exchanger 1a isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04020
Calcium signaling pathway
tty04260
Cardiac muscle contraction
tty04261
Adrenergic signaling in cardiomyocytes
tty04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
137180417 (slc8a1a)
04020 Calcium signaling pathway
137180417 (slc8a1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
137180417 (slc8a1a)
04261 Adrenergic signaling in cardiomyocytes
137180417 (slc8a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tty02000
]
137180417 (slc8a1a)
00536 Glycosaminoglycan binding proteins [BR:
tty00536
]
137180417 (slc8a1a)
Transporters [BR:
tty02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
137180417 (slc8a1a)
Glycosaminoglycan binding proteins [BR:
tty00536
]
Heparan sulfate / Heparin
Others
137180417 (slc8a1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
DUF7017
Motif
Other DBs
NCBI-GeneID:
137180417
NCBI-ProteinID:
XP_067441871
LinkDB
All DBs
Position
3:38292167..38321153
Genome browser
AA seq
968 aa
AA seq
DB search
MSRARTLSLFSNYQLLFLLTIISIELPYSAAGGSTLTLTSNSTLSNNTKCGGSTECEVGV
ILPIWKPDNPAFTDRLARATIYFVGLAYMFLGVSIIADRFMSSIEVITSQERQITIKKPN
GEKITTTVRIWNETVSNLTLMALGSSAPEILLSVVEVCGHNFNAGQLGPNTIVGSAAFNM
FVIIGLCVYVIPDGQTRKVKHLRVFFITATWSVFAYTWLYLILAVLSPGVVEIWEGLLTL
FFFPICVGLAYVADRRLLFYKYMYKRYRAGKQKGMIIETQGEPELPSKVDIEMDGKMHNS
HGEEFIDGETGFDVKELEEDEARREVARILKELKQKHPEKEMEQLMELANYQVLTQQQKS
RAFYRCQATRIMTGAGNILKKHAADQAKRAAQHDICTEVSGNDFSSKLFFDPGSYQCLEN
CGSVALNVVRRGGDLTSTVSVDYRTEDGTANAGSDYQFTEGTIVFKPGETEKEIRIDIID
DDIFEEDEHFLVHLSNVKVISEGAGSDEANHVDALAGLGLPCTATVTIFDDDHAGIFTFE
EPVVTVSESIGMMEVKVIRTSGARGVVVLPYKTMQGTAKGGGEDFEDTHGVLEFENDEIF
KTIQINIIDDEEYEKNKNFFLEIGEPRLLEMSERKALLLQEIGGFVKTDKQLYGRDIYRK
VQGRDYPAPSTIINITEEGGEEVLTKKEEEERRIAEMGRPMLGEHVKLEVIIEESYEFKS
TVDKLIKKTNLAVLIGTNSWREQFVEAITVSSGDDDDDECGEEKVPSCFDYVMHFLTVFW
KLLFAFVPPTDYWNGWACFVVSISVIGLLTAVIGDLASHFGCTVGLKDSVTAVVFVALGT
SVPDTFASKVAAIQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHSSKNQQFKVDPG
TLAFSVTLFTIFAFICIAVLIYRRRPEIGGELGGPRIPKILTSCLFFSLWLMYIVFSSLE
AYCHIQGF
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgagccgagccaggaccttgtcgctgttttccaactatcagctgcttttcttgttgacc
atcatctcaattgaacttccatattcagcagcaggaggatctactttgaccctcacatcc
aacagcacactcagcaacaataccaaatgtggtgggagtaccgaatgcgaagtgggcgtt
atcctgccgatctggaagccagacaatccggccttcaccgaccgcctcgccagagctacc
atttactttgtggggttggcgtacatgttcctgggtgtttccatcatcgctgaccgcttc
atgtcatccatcgaggtcattacctcgcaggagagacagatcaccatcaagaagccgaac
ggtgagaagatcaccacgacggtacgcatctggaatgagacggtgtccaacttgacccta
atggcgctgggttcctccgctcctgagatcctcctgtcagtcgtggaggtttgtggtcat
aacttcaatgctggtcagctgggcccaaacaccatcgtaggaagtgctgccttcaacatg
ttcgtcatcatcggcctttgtgtttatgtcatccctgatggacagaccagaaaggtgaag
cacctccgggtgttcttcatcaccgccacctggagcgtctttgcatacacctggctttac
ctgatcctggcagtcctttctccaggggttgttgagatatgggaggggctcctcacactc
ttcttcttccccatttgtgttggattagcttacgtggccgaccgaagacttcttttctac
aaatacatgtacaagcgataccgagcaggaaagcagaaaggaatgatcattgagactcag
ggagagccggagcttccctcgaaggtcgacatcgaaatggacggcaaaatgcacaactcc
catggtgaggagttcatcgacggagagacgggttttgatgtgaaggagctggaggaggat
gaggcccgcagagaggtggccaggatcctgaaggagttgaaacagaaacatcccgagaag
gagatggagcagctgatggagctagccaattaccaagttttaacccagcagcagaagagt
cgtgctttctatcgctgtcaggcaaccaggatcatgacaggagccggaaacatcctgaag
aaacatgctgccgatcaagccaaaagagctgcacagcatgatatctgcaccgaggtttca
gggaacgatttttcctccaagcttttcttcgaccctggctcctaccagtgtctggagaat
tgcggcagtgtagcactgaacgtggtgcgtcgtggtggagacctaacgagcacagtctca
gtggattaccggactgaagatggcaccgcaaacgccggctcagactaccagttcactgaa
ggaactattgtgttcaaaccaggtgaaacagaaaaggaaatccgtattgacatcattgat
gatgacatctttgaggaagacgagcatttcctggttcacctcagcaatgtgaaggtcata
tcagaaggcgctggctcagatgaggctaaccacgtggatgccctcgccggtttgggtctg
ccatgcacggccactgtcaccatcttcgatgatgaccacgcagggatctttacattcgag
gagcccgtggtgaccgtgagtgagagcatcgggatgatggaggtgaaggtgatccggaca
tcaggagctcgaggtgttgtggtgctgccgtacaaaaccatgcaggggacagctaaagga
ggcggcgaggactttgaggatacgcatggagtcctggagtttgagaacgatgagatcttt
aaaactattcagatcaatataatcgatgatgaagaatacgagaaaaacaagaacttcttc
ctagagattggagagcctcggctgctggagatgagtgagaggaaagctctgttgcttcag
gaaatcggtggattcgtcaaaacagacaaacagctgtatggcagagacatctacaggaag
gtccagggacgagactaccccgccccctctaccatcatcaacatcacagaggaggggggt
gaggaggttttgactaagaaggaggaggaggagaggcggatcgcagagatgggcagaccg
atgctcggtgaacacgtcaaactggaggtcatcatagaggagtcatacgagttcaagagc
actgtggataaactcatcaagaagaccaacctggctgtgctgatcggaacaaacagctgg
agggagcagtttgtggaggccatcacagtcagctctggtgatgatgacgatgacgagtgc
ggtgaggagaaggtgccctcctgcttcgactacgtcatgcacttcctcaccgtcttctgg
aaacttctgtttgcctttgttcctcccaccgactactggaacggctgggcctgcttcgtc
gtctccatctccgtcattggcctcctgacggcggtgatcggtgacctggcgtcgcatttc
ggctgcactgtcggcctcaaagactccgtcactgctgtggtgtttgtagctttgggcaca
tctgtcccagacaccttcgccagtaaggtggctgccatccaggaccaatacgccgacgcc
tccattggcaacgtgacaggaagtaatgccgtcaacgtcttcctgggtattggcgtggcc
tggtccattgctgccatctaccactcctccaagaaccagcaattcaaggtcgacccgggc
acactggccttctccgtcacactcttcaccatcttcgccttcatctgcatcgctgtcctc
atctaccgtcgccggcccgagattggcggggagcttggcgggcccagaatcccaaagatc
ctcacctcctgcctattcttcagcctgtggttaatgtacatcgtcttctcctcgctggag
gcctactgccacatacagggcttctaa
DBGET
integrated database retrieval system
