Thunnus thynnus (Atlantic bluefin tuna): 137180424
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Entry
137180424 CDS
T11154
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137180424
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tty04812
]
137180424
Enzymes [BR:
tty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
137180424
Membrane trafficking [BR:
tty04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
137180424
Cytoskeleton proteins [BR:
tty04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
137180424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_22
TIP49
AAA_16
AAA_14
Vps4_C
Mg_chelatase
MIT
IstB_IS21
NPHP3_N
DUF815
AAA_24
nSTAND3
AAA_2
Motif
Other DBs
NCBI-GeneID:
137180424
NCBI-ProteinID:
XP_067441883
LinkDB
All DBs
Position
3:complement(38442059..38454470)
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AA seq
557 aa
AA seq
DB search
MGLCGRSGRRNPPDGSASGDRVCTGKLAGLLRAVLSLVRALLCWLWSRTGAAVTTETRTS
DGGGGGSPERGERVRSHHRRAFEFIAAALKIDEDERGDKQQAVGWYQRGISELEEGVAIQ
MSGSGEKYERDRRLQNKMMTNLMMTRERLQSLVEVLSGSGAQTDPAYRPAHLRSAGGAVS
RKKDFPPSSRPKLLPKTSCSSSSSSSGLQRSSNLSSQRPHTHTHSASKGRTGRQLGGKLG
SPTSTPPLKKKKDTKNLKNVDKKLADLIHNEIVDSGSSVRFEDVAGQDLAKQALQEIVIL
PALRPELFTGLRTPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE
KLVRALFSVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRV
LVMGATNRPQELDEAVLRRFSKRVYVALPVEQTRFKLLKNLLGKHGNPLTHRELSQLARM
TEGYSGSDLTSLAKDASLGPIRELRPDQVRNMEASEVRNICFSDFMESLKKIKRSVGPQT
LEFYSCWNRNYGDTTAA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctgcgggagaagcggcaggaggaacccgccggacggatccgcctccggtgac
cgtgtctgtaccgggaagctggccgggctgctgcgggccgtgctgtccctggtccgggcg
ctgctctgctggctgtggagccgcaccggagccgcggtgacaaccgagacccgaacctct
gacggcggcggcggcgggagcccggagcgaggcgagcgggtcaggagccaccacaggcgg
gccttcgagttcatcgctgcggcgctgaagatcgacgaggacgagcgaggtgacaagcag
caggcggtgggctggtaccagcgagggatcagcgagctggaggaaggcgtcgccatccag
atgtcaggcagcggagagaaatatgaacgagacagacgtctgcagaacaagatgatgacc
aacctgatgatgacgagggagcgtctgcagtctcttgtggaggtgctgtcagggtccgga
gctcagactgaccccgcctaccgacccgcccacctgcgctcagcaggtggcgctgtctcc
agaaagaaagactttcctccgtccagccgaccaaagctcctcccaaagacgtcctgctct
tcatcatcatcctcatcgggccttcagcgctcgtccaacctgagctcacagcgcccgcac
acacacactcacagtgccagtaagggtcgaacaggtcgtcaactcggggggaaactcggc
tccccgacgtcgacaccaccgctgaagaagaagaaagacacaaagaacctgaagaacgtg
gacaagaagctcgccgacctcatccataacgagatcgttgacagcggctcatcagtacgg
tttgaagatgttgccggtcaggatttagcgaagcaggccctgcaggagatcgtcatcctg
ccggcgctgcggccggagctgtttacaggtctgcgtactccagccagaggactccttctg
ttcggtccccccggcaacggcaagacgatgctggcgaaagccgtcgcagccgagtccaac
gccaccttcttcaacatcagcgccgccagcttaacctccaaatatgtgggtgaaggagag
aaactggtccgagctctgttctctgtggccagagagctgcagccctccatcatcttcatc
gatgaggtggacagtctgctgtgtgaacgccgggagggcgaacacgacgccagccgccgc
ctcaagaccgagttcctgatcgagtttgacggggtgcagtcgggaggtgatgaccgcgtt
ttggtgatgggagccaccaacaggcctcaggagctggacgaggcagttctcaggcgtttt
tctaaacgtgtgtacgtggcgctacctgtcgagcagactcgcttcaagctgctgaagaac
cttttggggaaacacggaaacccgctgacccacagagagctgagccagctggccagaatg
acggagggctactccggcagcgacctcacctcattggctaaagacgcctctcttggacca
atcagagagttgcgtccagaccaggtgaggaacatggaggccagcgaggtgagaaacatt
tgtttcagtgactttatggagtcgctgaagaagatcaagaggagcgtcggtccgcagact
ctggagttttacagctgctggaacagaaactacggagacacgacagctgcgtga
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