Thunnus thynnus (Atlantic bluefin tuna): 137180445
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Entry
137180445 CDS
T11154
Symbol
capn1b
Name
(RefSeq) calpain-1 catalytic subunit b isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04141
Protein processing in endoplasmic reticulum
tty04210
Apoptosis
tty04217
Necroptosis
tty04218
Cellular senescence
tty04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137180445 (capn1b)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
137180445 (capn1b)
04217 Necroptosis
137180445 (capn1b)
04218 Cellular senescence
137180445 (capn1b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137180445 (capn1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tty01002
]
137180445 (capn1b)
Enzymes [BR:
tty01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
137180445 (capn1b)
Peptidases and inhibitors [BR:
tty01002
]
Cysteine peptidases
Family C2: calpain family
137180445 (capn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
DUF2283
Motif
Other DBs
NCBI-GeneID:
137180445
NCBI-ProteinID:
XP_067441923
LinkDB
All DBs
Position
3:complement(38799160..38821795)
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AA seq
702 aa
AA seq
DB search
MFGGVSGRIQKDRQRAGGLGSVQQAVQHLNQDFQTLKEDCLQNGSLFQDPMFPAEPTSLG
FKELGSFSAKTRGVEWKRPTELIEDPQFIVDGATRTDVCQGELGDCWLLAAIGSLTLNNQ
LLHRVVPHGQSFNHEYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELMFVHSAEGSEFWSA
LLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVAEMYELRKAPRDLPRIISKALERGSLLG
CSIDITSAFDMEAVTFKKLVKGHAYSVTALRQVDYRGRQERLIRIRNPWGQVEWTGAWSD
NSSEWNSIDSAEKDELLCKMEDGEFWMSFQDFLRQFSRLEICNLTPDVLSQDSTSFWITV
MFEGGWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDDEAACSFLVALMQKDRRRF
RRHGQDMHTIGFAIYEIPEQYRGCQSVHLKKDFFLRNSSCARSETFINLREVSARLRLPP
GEYLIVPSTFEPSKEADFVLRVFTEKQSETQEMDDDVVANFDEEEEISESDIDDSFRSMF
AQLSGDDMEISVRELRTILNRVVSKHRDLQTDGFSMESCRSMISLMDKDGSARLGLLEFQ
ILWNKIKKWLGIFREFDLDKSGCMSSYEMRLALENGGFKLNNTLYQMLVARYADNEMIDF
DNFTCCLVKLETMFKSFQQLDRDGTGTVEMNISEWLYMTMCG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgttcggaggtgtgtccgggcggatccagaaggaccggcagcgggccggaggactgggc
tcggtccagcaggctgtgcagcacctgaaccaggacttccagaccctgaaggaggactgc
ctgcagaatggatccttgttccaggacccaatgttccccgcagaacccacctcgctgggc
ttcaaggagcttggatccttcagcgccaaaaccagaggggtggagtggaagagacccacg
gagctgatagaggaccctcagttcatcgtggacggagccacgaggacggacgtctgtcag
ggagagctgggtgactgctggctgctggctgcgatcggctctctgactctgaacaatcag
ctgctgcatcgcgtcgttcctcacggtcagagcttcaaccatgaatacgccggcatcttc
cacttccagttctggcagttcggcgagtgggtggacgtggtgatcgacgaccggctgccg
gtcaaagacggagagctgatgttcgtccactcggctgaaggcagcgagttctggagcgct
ctgctggagaaggcctacgccaagttgaacggctcgtatgaggcattgtcgggcggcagc
accactgaaggctttgaggacttcacgggcggcgtggcggagatgtacgagctgaggaaa
gcccccagagatcttccccgcatcatcagcaaagctctggagagaggctcgctgctgggc
tgctccatcgacatcaccagcgccttcgacatggaggcggtcactttcaagaagctggtc
aaaggccacgcctactctgtgactgcactcagacaggtggactaccgcggccgtcaggag
cgtctgatccggatcagaaacccctggggtcaggtggagtggaccggagcctggagcgac
aactcctcagagtggaactccatcgactcggcggagaaagacgagctgctctgtaagatg
gaggacggagagttctggatgtcgtttcaggactttctgcgtcagttctccaggttggag
atctgtaatctgactccagacgttctcagtcaggactccaccagcttctggatcacggtg
atgtttgagggcggctggaggagaggaagcaccgccggcggctgcaggaaccatcccaac
acgttctggatcaaccctcagtacaagatcacgctgctggaggaggacgacgaccccgag
gacgacgaggccgcctgcagcttcctggtggctctgatgcagaaggaccgccgccgcttc
cgccgccacggccaagacatgcacaccatcggcttcgccatctatgagattcccgagcag
taccgaggctgtcagagcgtccacctgaagaaagacttcttcctgcgtaactcctcctgc
gctcgctccgagaccttcatcaacctgcgagaggtgagcgccaggctccgcctcccgcca
ggcgaatacctgatcgtcccgtcgaccttcgaaccgtcgaaggaggccgactttgtcctg
agagttttcaccgagaaacagtccgagacccaggagatggacgatgacgtggtggcaaac
tttgatgaagaggaggaaatctcagagagcgacatcgatgattccttcaggtccatgttt
gctcagctgtccggagacgacatggagatctcagtgcgagagctcaggaccatcctcaac
cgagtcgtgtccaaacacagagacctgcagacggacgggttcagcatggagtcctgcaga
tccatgatcagcctcatggacaaagacggcagcgctcggctcggtctgctggagtttcag
attctctggaacaagatcaagaagtggttgggaatcttcagagagttcgatctggataaa
tctggctgtatgagctcttacgagatgcgtctggcgctggagaacggcgggttcaaactg
aacaacacgctgtatcagatgctggtggctcgatacgccgacaacgagatgatcgacttc
gacaacttcacctgctgtctggtcaaactggagaccatgttcaagtcgtttcagcagctg
gatcgagacgggacgggaaccgtagagatgaacatcagcgagtggctctatatgaccatg
tgtggatga
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