Thunnus thynnus (Atlantic bluefin tuna): 137180774
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Entry
137180774 CDS
T11154
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
137180774
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tty01009
]
137180774
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tty04515
]
137180774
Protein phosphatases and associated proteins [BR:
tty01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137180774
Cell adhesion molecules [BR:
tty04515
]
Cadherins
Protocadherins
137180774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
137180774
NCBI-ProteinID:
XP_067442127
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Position
1:14378636..14383120
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AA seq
889 aa
AA seq
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MFNSKHLSLSKRGGIWGLCIILLYTSPLSCFANFSQAKELIYKIKEGLPRGTFIGAIGVD
LNLDFTVEPPFLFSLPQKKVSGQYVNLNNTTGELYTSATEIDRETLCPDNAEGQGCVLAL
DVFVLPQQYFQLVKVKIVIEDVNDNRPKFPVDEISMSIPENTPINARYAVEQSAVDPDLG
LHGVQTYWLVNDFGMFTLDVEENDGGELTPFLIVTEALDRETQAEYITDIIAEDGGTPPL
LGAATLKIVITDVNDNCPQFTESHINVTLHGNTTKGAHLARLHAFDPDLGANAQISYAYS
ERVPRDTRNLFHLDRITGVIKLAGKIDTGTATFYKLTVLANGPGCIPAVATVTVHIIKVV
TGPPAVIPRYIAPEKDGVVTIKESEPVFSPIAFFTVKNIDRNQRVDCHLEGTGPFRLGPY
QLLKNEYLLETTEPLDYEKTQEYELIVVAKNTRGLVIKTFLKVQVLDENDNAPVFQQSLI
ELSIEENNPPNTFLTQLQATDQDSESRGEVIYLLGGDAPGIFVVDRVTGVLTVATSLDRE
EKETYRFIVRAVDQGTPRRESIATVVVTVQDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVTDADAGENGWVALSILNGSDIFLIDTGKGALRAKTSLDREQQGTYQLWIEAVDGGEP
ALSCVTMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPNTLPGTSITEVYAVDKDTGMNAVI
AYSIIKRKGGEPGSFAIDPETGNITLKRELSNRGLYSLLVKVSDHGQPEPLYSTVMVNFF
VNETVSNESYIQSLLTKEADIEVEERPWYIGQMTEGPERYELFSCQPVLIALSVTCLGLF
FSVVTLTSYICCKRFKKHRKKRSEVEIPLKMKNDSMQGVNRKLRQISNI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacagcaaacacctcagccttagcaaaagaggaggaatatggggattgtgcatc
atcttgctttacaccagccctctttcctgttttgcaaatttcagccaagctaaagagctc
atctataagataaaggagggattacccagggggaccttcataggggccattggagtagac
ttaaatttggatttcacggttgagcccccctttttattcagtctgcctcaaaagaaggtc
agtggacagtatgtgaacctaaataataccaccggagagctttacacatctgctacagag
attgacagggagacgctctgtcctgataacgcagagggacagggatgtgtgctcgcactg
gatgtgtttgtgttgcctcagcagtattttcagctggtgaaagttaagatcgttattgag
gatgtgaacgacaacaggccaaagttccctgtggatgagatctctatgtctatcccagaa
aacacacccatcaatgctcgttatgcagtggagcagtcagcagttgacccagacctgggt
cttcatggagtgcagacctactggcttgttaatgactttggcatgttcacactggatgtt
gaggagaatgatgggggtgagctgacaccctttctcattgtgacagaagctttggacaga
gagacacaggctgaatacattacagatatcatcgcagaggatggagggaccccccctcta
cttggcgcagctactttaaaaattgtcatcacagatgtgaacgataactgcccccaattc
actgagtcacacattaatgtcactctgcatgggaataccaccaaaggggcacatttggca
cgtctacatgcttttgaccctgaccttggtgctaatgctcagatcagctatgcttacagt
gaacgtgtgccaagggataccaggaacttgttccatttggacagaatcacaggggtcatc
aagctagcagggaaaatagacactggcacagccacgttttacaaactcactgttctggcc
aatggacctggttgtatacctgctgttgccaccgttactgttcatatcattaaagttgtg
acaggaccacctgctgtcataccccggtatattgcaccagaaaaggatggagtggtgaca
ataaaggagtctgagccagtgttttctccaatcgctttttttactgtcaaaaacattgac
aggaaccaaagggtggactgtcatttggagggtactggtcccttcaggcttggcccctat
cagcttttgaaaaatgaatacctgctagagactactgagccgctggactatgagaagaca
caggagtatgagctaattgtggttgctaagaacacacgggggcttgtcatcaagaccttc
ctcaaagtgcaagtattggatgagaatgacaatgctccagtgtttcagcagtctttgata
gaactatctatagaggagaacaatccgccaaatacctttctaacccagctgcaagccaca
gaccaggacagtgaaagccgaggggaggtcatctatctccttggaggtgacgcccctggg
atctttgttgtagatcgtgtgacaggtgttctgactgtggccacatcactggatcgcgag
gagaaagagacataccggttcatagtgagagcagtggaccaggggacacccaggagggag
tcaattgcaactgtggtggtgaccgtgcaagaccgcaatgacaacagtccacgcttcatc
aataaggacttcaccttcttcgtgccggagaactttccagggtacggtgagatcggagtc
ctctctgtgacagatgctgatgctggggaaaatggctgggtggctctttctatcctgaat
ggcagtgacatcttcttaattgacacaggcaaaggcgcactcagggccaagacctcacta
gaccgtgagcaacaggggacataccagctgtggattgaggccgttgatggtggagagcct
gcactttcctgtgtcacaatggtgaccgtgctgctgctggatgttaatgacaacccaccc
attgtccttttcccccagtccaatcagtcctacatgctagtgctccccaataccctacca
gggacgtctatcacagaggtgtacgctgtggataaggatacaggcatgaatgctgtgatt
gcctatagcatcataaaaaggaaaggtggtgagccagggtcatttgccattgacccagaa
acaggaaatatcacattaaagagggagctcagcaaccgcggcctctacagccttctggtg
aaggtcagtgatcatggtcagccagagccactttactcaacagtcatggttaacttcttt
gtcaatgaaacagtgagcaacgagagctacatccagagtctgctgaccaaagaggctgac
attgaggtagaggagaggccttggtatattggtcagatgacagaggggcctgagaggtat
gagctgttctcctgtcagcctgtcctcatagctctttcagtgacatgtctggggctattc
ttctcagttgtcacactgacatcttacatatgctgtaagaggtttaaaaagcacaggaag
aaacgatcagaagtggaaatacctttaaaaatgaagaatgactcgatgcagggtgtgaac
aggaagctcaggcagatctcaaacatctga
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