Thunnus thynnus (Atlantic bluefin tuna): 137180864
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Entry
137180864 CDS
T11154
Symbol
tgfbrap1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 homolog
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
137180864 (tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137180864 (tgfbrap1)
Membrane trafficking [BR:
tty04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
137180864 (tgfbrap1)
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Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
VPS18_solenoid_2nd
TPR-S
Motif
Other DBs
NCBI-GeneID:
137180864
NCBI-ProteinID:
XP_067442240
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All DBs
Position
1:complement(15224561..15239875)
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AA seq
877 aa
AA seq
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MSVKAFELVPAVERDLLMGDKARINIECIECCGKHLYVGTNDCFIHHFLLDEVTSSKGKL
SYSSQKLLHKYLGLKKPVAELRAASALERLIVLCDGIVFLVDMVTLETVPSAAGGGAKIR
GVAAFCINENPVNGDPFCVEIGVLSSKRRTVQIYMVYEDRVQLVKEVTTPEQPCAVSLDG
YFLCLALATQYMILNYHTGASQDLFPYNSEERRPIVKRIAREEFLLAAPGGLGMFANAEG
VSQRAPVNWSESVIGAAVCFPYVVALDESFITIHSMLDQQLKQTLSFRDGHILQVFEGKV
ILASTKAVYVLVPLPLERQIQDLLASHRVEEALILTEGAQRNIPKDKFQILHKRILQQAG
FIQFGQLQFLEAKEHFRKGQLDVRELISLYPLLLPASSSFTRCHPPLHEFADLNHLAQGD
QEKVLRCKKFLISYLGEVRSTEVANGCREDVDTALLKLYAEQDHDSLLDLLASDNACLLT
DSVPWLEKYHKYFALGLLYHCNGQDSAALQLWIRVVDGDLQDPTRSDLYEYIVDFLCSCS
NLDLVWKYADWALKKDPTIGVHIFTKRPGSKDQSELKPDDVITYLAKHSQALLLYLEHLV
LERRIQKEKFHTHLAVLYLERVKSLLSESSANEEQLTRARERLQALLRESNLYRVQFLLG
KIENCEQLLLECATLHGKLEEHDKALHILVHELRDFPSAEAFCIWASCCRDSAYRQQLFH
LLLGVYLDGTRPGKSQTAAGSSSGDLEMAAVDLLNRHGESFDAVRVLRMLPEGWSLQLLR
PFLGRAIRANMHACRTSQIALGLAHSENLQLLHDRLKERKKPIFVSEKKGCHLCHNTFSE
PDVVCLPGGVPVHTHCVAQRVRDSPTKRQLTNSSNHT
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaaggcctttgagctagtccccgctgtggagcgagacctccttatgggtgac
aaggctcgcataaacatcgagtgcatagaatgctgtgggaaacacttgtacgtcggcacg
aacgactgcttcatccaccacttcctgctggacgaggtcacttcctccaaagggaaactg
agttactcgtcccagaagctgctgcacaaatacctgggcctcaagaaaccagtcgccgag
ctgcgagccgcctccgctttggagcgtctgatagtgctctgcgatggaatagtgtttctt
gttgacatggtgacgctggagaccgttccctcggcggcaggaggtggagccaagatcaga
ggtgtggcggccttctgcatcaacgagaacccggtgaacggtgaccctttctgcgtggaa
ataggcgtgctctcctccaagcggcggacagtgcagatttacatggtgtatgaggacaga
gtgcagctggtcaaagaggtgaccacgcctgagcaaccctgcgccgtcagtcttgacggt
tacttcttgtgcctggccctcgctacacagtacatgatcctgaactaccacacgggagcc
tcccaagacctcttcccttacaacagcgaggagaggagacccatcgtgaagaggatcgcc
agggaggagttccttttggcggcacctggtggtcttggaatgtttgccaatgcagaaggg
gtatcccagcgggctccagtcaactggtcagagagcgtgattggtgccgctgtgtgcttc
ccttatgtggtggctttggatgagagcttcatcactatccacagcatgctggatcaacag
ctgaaacagactctgtcattcagggatggacacattctgcaagtctttgaagggaaggtc
attctggcttccactaaagctgtgtatgttctggtacccttgccgctggagagacagatc
caggacctactggccagtcacagagtggaggaggcgctcatcctcacagaaggagcacag
agaaatattcccaaagacaagtttcagattttgcacaaaagaatcctccagcaggcaggt
ttcatacagtttggacaacttcagtttctagaagcaaaagaacacttcaggaagggtcag
ctggacgtgcgggagctgatatctctctacccactgctgctgccagcttcctcttcattt
acacgctgccaccctcctctccatgagtttgcagatctcaaccacctggcacagggtgac
caggaaaaagtgctgcggtgcaagaaatttcttatcagctatttgggagaggtacgaagc
acagaggtagctaatggctgcagagaggacgtggacacggctctgttgaaactttatgct
gaacaggatcatgacagccttctagacctgttggcttcagacaatgcctgtctgctaaca
gacagcgtcccatggctggagaaatatcacaaatattttgcacttgggctgctctaccat
tgtaatggtcaggattcagcagcactacagttgtggattcgcgtggtagatggggatctc
caggaccccacgagatctgacctttatgagtacattgtggactttctctgctcctgctcc
aatctggacctcgtgtggaagtatgcagactgggctttaaagaaggatcccaccataggt
gtccacatctttactaagaggcctggcagtaaagatcagtcagagctgaagcctgatgat
gttatcacttacctggcaaagcacagccaggcgcttcttctctacctggaacacctggtg
ctggagagacggatacagaaggagaagttccacacacacctggctgtgttgtacctggag
agggtcaagtcattgctgtcagagtcgtcagccaacgaagagcagctgaccagagcaaga
gagaggctccaagctctgctcagggagtccaacctataccgtgtacagtttcttttaggt
aagatagaaaactgtgaacaactgctgctagagtgtgcaacactacatggaaaactggag
gagcacgataaagctctgcacatattggtgcatgagctcagagacttcccgtccgctgag
gccttttgtatatgggcctcttgttgtcgggattctgcttaccgacagcagctgtttcac
cttctcttgggagtgtatctagacggaacccgtcctggaaaatcccagacagcggcaggc
agcagcagtggagacctagaaatggcggcagtggacctcctgaatcggcacggagagtcg
tttgatgcggtccgcgtgctgcgtatgctccccgagggctggtcactgcagctgctgcgg
cccttccttggtcgagccatcagggccaatatgcacgcctgccgcacctcgcagatcgct
ctggggctagcccactctgaaaaccttcaactgctgcatgacaggttgaaagagcggaag
aaaccaatctttgtgtctgagaagaagggatgccacctgtgccacaacaccttcagtgag
cccgacgtggtgtgcctgccaggtggagtgcctgtccatactcactgtgtcgcccagaga
gtaagagactctcccacaaagagacagttaactaatagcagcaaccatacgtga
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