KEGG   Thunnus thynnus (Atlantic bluefin tuna): 137181415
Entry
137181415         CDS       T11154                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
tty  Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:tty00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tty03009]
    137181415 (rrp9)
Ribosome biogenesis [BR:tty03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    137181415 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_DCAF4 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_NWD2_C PEP5_VPS11_N WDR54 WD40_like Beta-prop_RIG_1st Ntox15
Other DBs
NCBI-GeneID: 137181415
NCBI-ProteinID: XP_067443206
LinkDB
Position
4:complement(18132521..18138390)
AA seq 521 aa
MLLQLPSSVAVHPCGFNVDWFEKVEALTLNSGYRLLRNAVLSRFTMSSFFIKKKENPKLA
KKGTAVIKRKNDGDSGKSKIQAKKPNSKYNEEISSDSETESPTEPKKRPSNEVVEYDETP
QEKKLRLAKRYLEQLKEEEENKAEEESFETDLVAGRLQEEVLEQKGKLQRLIAKDLIPPD
PSEIRLLRGHKLPITCLVISSDDKFIFSAAKDCSIIKWDVESGKKLRTIPGGRKGTEDRH
VGHTAHILCMSISSDGKYLATGDMNNLIMIWEAETCKHLYKFTGHKGPVSGLSFRKGTHD
LYSASHDRSIKVWNVDENAYVETLFGHQDAITGLDSLSRERCVTAGGRDRTVRVWKIAEE
SQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKKPLSTVKQAHGCHGDAGLEQ
SHWVASVAALHNSDAVASGASGCSHNSQVQLWKCGQYYRGLEPLFSVPVPGFVNSLKFSS
SGQFLVAGVGQEHRLGRWWRLKEAKNGIYIIPLKRKPPNPE
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgctacttcaacttcctagttcggttgcagtgcacccatgtgggttcaatgttgactgg
tttgagaaagttgaagcgttaactcttaactccggttaccgtttacttcgaaacgcagtt
ctgtcgcgtttcaccatgtcgtcttttttcataaagaaaaaagaaaaccccaaattagcc
aaaaagggtacagccgtgataaaacgaaagaatgatggggactctggaaaaagcaaaata
caagccaagaaaccaaactccaaatacaacgaagagatttccagcgactccgagacagag
agtcctacagagcccaagaaaaggccatccaatgaagttgttgaatatgacgaaacccca
caggagaagaagcttagattagccaaacgttaccttgaacagcttaaagaagaagaggaa
aataaagctgaagaagaatcctttgagacagacctagttgctggaagactccaagaagaa
gtgcttgaacagaaaggaaaacttcagcgacttattgccaaagatctcattccaccagat
ccttcagagatcaggctgttaagaggacacaagcttccaattacctgtctggtgatcagt
tctgatgacaagttcatcttttctgctgctaaagactgctccatcattaaatgggatgtt
gagagtgggaagaaactgcgtacaatacctggtggaaggaaaggtacagaggatcgccat
gttggacatacagcccacatcctgtgtatgtccatatcatcagatggaaaatacttggcc
actggagacatgaacaatctgattatgatttgggaagcagaaacatgtaaacatctatat
aaattcacaggacacaaagggcctgtgtcgggtctctcgttcaggaagggaacccatgat
ctgtacagcgcctctcatgatcgctcaatcaaggtgtggaatgtggacgagaacgcatac
gtggaaactctctttgggcatcaggacgccatcacaggactggacagcctgagccgtgag
cgctgtgtgactgcaggaggacgggaccgcactgtgagggtgtggaagatcgccgaggag
tctcagctagtgttccacggccacgagggttcaattgattgtatccaactcataaacgag
gagcacatgataacaggagctgatgatggctccgtgtctctttggagtgtcaacaagaag
aagcctctcagcacagtgaagcaggctcatggttgccatggcgatgccgggctggagcag
tctcactgggtagcttcggtagcggcgcttcacaactcggatgctgtagcctcaggtgcc
tctggctgttcccacaactcacaggtgcaactgtggaagtgtgggcagtattaccgtggg
ctagagcctctgttcagtgtgccagtgcccggttttgtcaacagcctgaagttttcgagc
tctggtcagttcttggtggcaggagttggacaggagcacaggttgggccgatggtggaga
ctaaaagaggccaagaatgggatctacattattcctcttaaaaggaaacctcctaatcca
gaataa

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