Thunnus thynnus (Atlantic bluefin tuna): 137181673
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Entry
137181673 CDS
T11154
Symbol
scn8ab
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit b isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137181673 (scn8ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tty04040
]
137181673 (scn8ab)
Ion channels [BR:
tty04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
137181673 (scn8ab)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
ATP-synt_B
HpsJ
IQ
Motif
Other DBs
NCBI-GeneID:
137181673
NCBI-ProteinID:
XP_067443638
LinkDB
All DBs
Position
4:21860229..21915974
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AA seq
1862 aa
AA seq
DB search
MANAVQTFLNVCLLTLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLTKI
VARGFAIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGL
KTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPVNMTEQYLANGS
KGFDWDEYIMNNTNFYFYPGQVDALLCGNSSDSGRCPEGFTCMKAGRNPNYGYTSFDSFG
WAFLTLFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQ
NQATIEEAEQKEAEFKAMLEQLKRQQEETMAPAMATSAGTVSEAALEDEGGGHLSRSSSE
VSKLSSKSAKERRNRKKKWRQKEQEKEKGDSEKVVKSESDDGSKKSTIRFPGSRLGRKTS
IMNQSLLSIPGSPFMSRHNSRSSIFSFKGRSKDMGSENEFADDEHSTVEESEDRRGSLFI
PYRRNSYSGYSQGSSRIHPLAPHSGGKRNSTVDCNGVVSLIGPGPGRRLLPEVKIDKAAT
DDSTTDVEIKKKHSGSLMVSVDQLNSSFKGKDRANSQMSVVTNTLIEELEESQRKCPPCW
YKFANTFLIWECFPFWLKIKHIVYLIVMDPFVDLAITICIVLNTLFMAMEHYPMTDEFEG
VLAVGNLVFTGIFAGEMFAKLIAMDPYYYFQEGWNCFDGFIVTLSLVELGLADVEGLSVL
RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKD
CVCRIAEDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLTVFMMVMVI
GNLVVLNLFLALLLSSFSADNLAATDDDGEPNNLQLAVARIKRGVAWFKANMRVFVATVL
KKSEEDEQKPLDEMYEKKLNCIANHTVDINRELDYAKNGNGTTSGIGSSVGKYMIDEDYM
SFIHNPNLTVCVPIAVGESDFENLNTEDFSSESDVENSKDLDDTSSSEGSTIDIKPDVEE
VAVVEVVEEYIDPDACWTDECVAKYKCCDVPITHGWGKHWWFLRKTCYLIVEHNWFETLI
IFMILLSSGALAFEDVYIEQRKTVRIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAW
CWLDFFIVDVSIVSLIANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAI
PSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCYNDTAEDLFHPDEVNNKTECLALISANF
SEVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAIDSRKVEDQPLYEDNLYMYIYF
VIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPI
PRPQNYIQGMVFDFVTQQVFDISIMIMICLNMVTMMVETDDQSKETEEVLYWVNFIFIVI
FTGEFLLKLFALRHYYFTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARI
GRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDD
MYNFETFGNSMIILFMITTSAGWDGLLLPILNYPPDCDPLLENAGTPATGDCGNPSVGIF
FFVMYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDASQFIT
YAKLSDFADALEHPLRVPKPNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDM
LRQQMEERFVAANPSKVSYEPITTTLRRKQEDVSARIIQRAYRAYLARRGFVCKRKPANN
KVENGGNNQEQEKKEGTPSTASLPSYDSVTKPDKEKQDDNNEGKGGRKEKGRNQKDIRES
KC
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgctgttcaaactttccttaacgtctgtctcctcacgttattcagcatgatc
atcatgtgtacgattttgaccaactgtatattcatgacatttagtgaccccccagagtgg
tccaaacaagtagagtacactttcacaggtatctatacgtttgagtcactcacaaaaatt
gttgctcgaggcttcgctatagatgggttcacatttctcagagacccatggaactggctg
gatttcatggtcatctcaatggcatatataacagagtttgtggaccttgggaatgtctcg
gcgctgagaacgttcagggttctccgagcattgaaaactatttctgtcattccaggcctg
aagaccattgtgggtgctctgatccagtctgtgaagaagctgtcggatgtgatgatcctg
accgtcttctgtctcagcgtctttgctctgattggactgcagctcttcatggggaacctg
cggaataagtgtgtagtctggccagtcaacatgacagagcagtacctggcaaatggcagc
aaaggctttgactgggacgaatacatcatgaataacacaaatttctacttctaccctggt
caggttgatgctctactatgtggaaatagttctgactcgggtcgatgtccagagggtttt
acatgtatgaaagccggaaggaaccccaactatggttacaccagttttgacagctttgga
tgggctttcctcaccctctttcgactcatgacccaagacttctgggagaatctttacatg
ctgactctgcgagctgcagggaagacctacatgatcttctttgtgctggtcatctttgtg
ggctccttctacctggtgaatctcatcttggctgtggtggccatggcttatgaagagcag
aaccaggccactattgaggaggcggagcagaaagaggctgaattcaaagctatgctggag
cagctcaagaggcagcaggaggagacaatggctcctgccatggcgacatctgcaggcaca
gtttcggaggctgctttggaggatgaaggaggggggcacttgtcccgcagctcctctgaa
gtctccaagctgagctccaagagtgccaaggagcgtcgcaaccgcaagaagaaatggcgg
cagaaagagcaggagaaagagaagggagacagtgagaaggttgttaagtctgagtcagat
gatggcagcaagaaaagcaccattcgtttcccaggaagccggctggggaggaagacatca
atcatgaaccagtcacttctcagcatcccaggctcacccttcatgtcgcgccacaacagc
cgcagcagcatcttcagcttcaaaggccgttccaaggacatgggctcagagaacgagttt
gccgatgacgaacacagtacagtggaggagagcgaagaccgccggggctccctatttatc
ccttaccgccgcaacagctacagtggctacagccaaggctcgtcacgcatccacccgctg
gcaccccactctggagggaagaggaacagcacagtggactgcaatggcgtggtgtctctc
atcggccctgggcccggcagacggcttctgcctgaggtgaaaatagataaggcagccact
gatgacagtactacagatgtggagatcaagaagaagcactctggctctctcatggtatct
gtggatcagcttaactcctcctttaaaggaaaggaccgtgccaacagtcagatgagcgta
gtgaccaacacactgatagaagagttggaggagtctcagaggaaatgtcctccctgttgg
tacaagtttgccaacaccttcctcatctgggagtgctttcccttctggctgaagatcaag
cacatagtctatttgattgtcatggacccatttgttgacctggccatcaccatctgtatt
gtcctcaacaccctcttcatggccatggagcactaccccatgactgacgagtttgaggga
gtcctggctgttggcaacctggttttcacaggcatctttgctggggagatgtttgccaaa
ctgatcgccatggacccttactactacttccaagaaggctggaactgctttgatggtttc
attgtgactctgagtttagttgagctggggctggctgatgtggaaggtctgtcggtgctc
aggtcattccgattgttaagagtgttcaaactggccaaatcatggcccaccctgaacatg
ctgatcaagatcatcggtaactcagtgggagccctgggtaatctgaccctcgtgctggct
atcatcgtcttcatctttgccgttgtgggcatgcagctgtttggcaaaagctacaaggat
tgtgtgtgtaggatcgcagaggactgtgagctgccccgctggcacatgaacgacttcttc
cactccttcctgattgtgttcagagtgttgtgcggggagtggatcgagaccatgtgggac
tgtatggaggtggcaggacagaccatgtgcctcactgtcttcatgatggtcatggtcatc
ggaaacctggtggtgttgaacctgtttctggccttgctgctgagctcgttcagtgcagac
aacctcgctgccacagatgatgatggtgagcccaacaacctccagcttgcggttgcccgc
atcaagagaggtgttgcctggttcaaggccaacatgcgggtctttgtagccacagtgctc
aagaagtctgaagaggatgaacagaagcctctggatgaaatgtacgagaagaagctcaac
tgtattgcaaaccacacagtggacatcaaccgtgaactggactatgctaaaaatggcaat
ggcaccaccagcggcattgggagcagtgtgggaaagtacatgattgatgaggactacatg
tccttcatccacaaccccaacctcactgtctgcgtccctattgctgttggcgagtcagac
tttgaaaaccttaatacggaagacttcagcagtgaatcggatgtggagaacagtaaagat
ttggatgacactagttcgtctgagggcagcacaatagacatcaagcctgatgtggaggag
gtggcagtggtggaggtagtggaggagtacattgacccagatgcctgctggacagatgaa
tgtgtggccaaatacaaatgctgtgatgttcccatcacgcacggctgggggaagcactgg
tggttcctgaggaagacgtgttacctgattgtagaacacaactggtttgaaaccctcatc
atctttatgatcttgctcagcagtggagccctggcctttgaggatgtgtacattgagcag
aggaagacagtccgcatcattctggagtatgctgatcgggttttcacctatatcttcatc
ctggagatgttgctgaaatgggtggcctacggctttgtgaagtacttcactaatgcttgg
tgttggttagacttcttcattgtggatgtgtctatagtcagccttatagctaatgcgttg
ggctactccgatctaggcccgattaaatcactcaggacactaagggccttgagacccctc
agggccctgtcacgttttgaagggatgagggttgtggtgaacgccttggtgggtgcaatt
ccctccatcatgaacgtgctgctggtgtgtctcatcttctggcttatcttcagcatcatg
ggtgtcaacctgtttgctggaaagtattactactgttacaatgacacggctgaggacctc
ttccacccagatgaggtcaacaacaaaacagagtgccttgcactcattagtgcaaacttc
agtgaagtcagatggaaaaacgtcaagatcaattttgacaatgtgggtgcaggatacctg
gcgctcctgcaagtggcaacatttaaaggctggatggacattatgtatgcagcaatagat
tctagaaaggtggaggaccagcccctctatgaggacaacttgtacatgtacatctacttt
gtcatctttattatcttcggctcgttcttcaccctaaacctcttcatcggtgtcatcatc
gataacttcaaccaacaaaagaaaaagtttggaggtcaggatattttcatgacagaagaa
cagaagaaatactacaatgccatgaagaaactaggatcaaagaaaccacagaaaccaata
cccaggccacagaactacatccagggcatggtgtttgactttgtgacgcagcaggtgttc
gacatctccatcatgatcatgatctgcctcaacatggtcaccatgatggtggagacagat
gatcaatcaaaggagacagaggaagtgctttactgggtcaacttcatcttcattgtgatc
ttcactggcgagtttttactgaagctctttgcgctgcgtcactactatttcaccaacggc
tggaacatctttgatgtagttgtggtcatcctttcaattgtgggaatgtttctggctgac
ctgattgagaagtactttgtgtcaccaacactcttcagggtgattcgtctggctcgtatc
ggcagaatcttgcgtctcatcaagggggccaaaggaatcagaactctgctgtttgccctg
atgatgtcacttcctgccttgttcaacattggcctactacttttcctggttatgttcatt
ttctctatctttggcatgtccaactttggctatgtgaaacacggggctggaattgacgac
atgtacaactttgagacctttggcaacagcatgatcatcctgtttatgatcaccacgtca
gctggctgggacggcctgttgctgccaattcttaactaccctccagactgtgacccctta
ttggagaatgctggcacccccgccacaggagactgtggcaacccttctgtgggcatcttc
ttctttgttatgtacatcatcatttctttcctaattgtggtcaacatgtacatcgccatc
atcctggagaacttcagtgtggccacagaggagagtgccgacccactcagtgaggatgac
tttgagaccttttatgagatttgggagaagtttgaccctgatgcctcccagttcatcacc
tatgccaagctttctgactttgctgatgcacttgaacacccactcagagtccccaagcca
aacaccattgaactgatcgccatggacatgcctatggtgagtggtgaccgcatccactgc
ctggacatcctgtttgccttcaccaagcgtgtgctgggcgacagtggcgagttggacatg
ttgaggcaacaaatggaggagcgttttgtggcagccaatccctctaaggtctcttatgag
ccaatcaccaccactctgaggcgcaagcaggaggatgtgtcagccagaatcattcagagg
gcctaccgcgcctacctggctaggcggggtttcgtctgtaagcgcaaaccagccaataac
aaagtggagaatggcgggaacaatcaggaacaggaaaagaaggagggcactccctcaact
gcctccctgccctcttatgacagtgtaaccaaacctgacaaggagaaacaggatgacaac
aatgagggcaaaggagggaggaaagagaaaggaagaaaccaaaaagacatcagggaatct
aaatgttag
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