Thunnus thynnus (Atlantic bluefin tuna): 137181772
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Entry
137181772 CDS
T11154
Symbol
ppfia4
Name
(RefSeq) liprin-alpha-4 isoform X1
KO
K26226
liprin-alpha
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137181772 (ppfia4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137181772 (ppfia4)
Membrane trafficking [BR:
tty04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
137181772 (ppfia4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
137181772
NCBI-ProteinID:
XP_067443847
LinkDB
All DBs
Position
4:23733722..23792476
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AA seq
1193 aa
AA seq
DB search
MMCEVMPTINEGDSAGPPRGTGGVPNGSDQEANFEQLMVNMLDERDKLLESLRETQETLI
HSQTKLQGALHERDVLQRQINAALPQEFATLTKELNICREQLLEKEEEISELKAERNNTR
LLLEHLECLVSRHERSLRMTVVKRQAPPPSGVSSEVEVLKALKSLFEHHKALDEKVRERL
RVALERVATLEGQLAATTQELNMVKQRKDNDSVERTDGSKPTWKRLPNGSIDAHDDSSRV
SELQELLDRTNKELAQSREHSATLNARMAELEAELTNARRELSRSEELSIKQQREQRERE
DMEERITTLEKRYLAAQRETTHIHDLNDKLENELATKDSLHRQSEEKVRQLQEMLEMAEQ
RLAQTMRKAETLPEVEAELAQRVAALSKAEERHGNVEERLRQLESQLEEKNQELGRARQR
EKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEDKNSLIQDLENCQKQLEEFHHT
RERLIGEIEKLRNEIDHLKRRSGAFGDGTHPRSHLGSSSDLRYSVVEGQDGHYSTTVIRR
AQKGRLSALRDDPNKVCAVFEQDYTSLRGSVSHLLGSDIEAESDLDDDVSSALLSPSGQS
DAQTLALMLQEQLDAINEEIRMIQVERESADLRSDEIESRVNSGSMDGLNVTLRPRALPT
SATAQSLASSSSPPTSGHSTPKHHARNTSHHLGIMTLPSDLRKHRRKVASPVEVDKATIK
CETSPPSSPRSLRLETNFAQFTGSLEDGRGKQKKGIKSSIGRLFGKKEKGRLDQTMGRDG
QPLPALSDFDMGIGDTMTLGKLGTQAERDRRMKKKHELLEDARKRGLPFAQWDGPTVVSW
LELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTS
PSAPLTSRTSSGNVWVTHEEMENLASSTKAENEEGSWAQTLAYGDMNHEWIGNEWLPSLG
LPQYRSYFMECLVDARMLDHLTKKDLRSHLKMVDSFHRASLQYGIMCLKRLNYDRKDLER
RREDSQHDMKDVLVWTNEQVIHWVQSIGLREYSGNMLESGVHGALLSLDETFDYSSLALI
LQIPMQNTQARQVLEREFNNLLALGTDRRLEESGDDKSFRRSPSWRKRFRAREGGAGLGM
MAGSMETLPAGFRMPSMSMPPSVNLMPKKQLQPEAPPPAPPRLDPSAVRTYSC
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgccgactatcaacgagggagactcggctggtcctccgagaggt
accggcggcgtcccgaacggttcggaccaggaggccaacttcgagcagctgatggtcaac
atgctggacgagagggacaagctgctggagtccctcagggagactcaggagaccctcatc
cattctcagaccaagctgcagggggcgctgcatgagagggacgtgctccagcggcagatc
aacgccgcgctgcctcaggagtttgccaccctgacgaaagagctgaacatatgccgggag
cagctgcttgagaaagaggaggaaatatctgaactgaaagctgaaaggaacaacaccagg
ctgctgttggagcacctggagtgtctggtatctcgtcacgaacgcagtctgaggatgaca
gtggtgaagagacaggcaccccctccatctggagtctccagcgaggtggaggtcctcaaa
gctctgaagtcactgtttgaacaccacaaggctctggatgaaaaggtgcgtgagaggctt
cgggtggctctggagagggtggccaccctggagggacagctagcagctaccacacaagag
ttgaacatggtgaaacaaaggaaggacaatgactcagtggagcgaacagatggatccaaa
cctacatggaagagactgcccaacggctccatagacgctcacgatgacagcagccgggtg
tctgagctccaagagctgctggacagaaccaataaggaactggcccagagccgcgagcac
tccgccacgcttaacgcccgcatggccgagcttgaggctgagctcacaaatgcacgcaga
gaactgagtcgcagcgaggagctgtcaatcaaacaacagagggaacaaagagagagagag
gatatggaggagaggataacaacgctagagaaacgctacctggctgcccagcgggaaaca
acacacatccacgacctcaacgacaaattagagaatgaactggccacaaaggactccctg
cacagacagagtgaggagaaggtgcgccagctgcaggagatgctggagatggcagagcag
aggctggctcagaccatgaggaaggctgagaccctgccagaggtggaagctgaactggca
cagagagtggcagcgctctccaaggccgaagagcgtcatggcaacgttgaggagaggctc
agacagctggagtcacaactggaggagaagaaccaagagctgggaagggctcgtcagagg
gagaaaatgaatgaggagcacaacaagcgtttatctgacaccgtggatcgtctgctcact
gagtccaatgaaagactgcagcttcatttgaaagaacgcatggctgcactggaggacaag
aactccctcattcaagaccttgagaactgccagaaacagcttgaagagttccaccacacc
agggaacggctgattggagagattgagaagctgagaaatgagattgaccatttgaaacgc
cgcagcggggcgtttggagatggaactcaccctcggtctcacctgggtagttccagcgac
cttcgctactctgtggtggagggccaagatggccactacagcacaactgtgatcaggcgg
gcacagaagggcagactgtcagcgctacgagatgacccaaacaaggtgtgcgcggtgttc
gaacaggactacacatcactgcgcgggagcgtcagccacctcctcggcagcgacatcgag
gcagagtcagacctggatgacgacgttagctcggcgctgctttcccccagcggccaatca
gatgctcagactctcgctctcatgctgcaggagcagcttgacgctatcaatgaagagata
aggatgatccaggtggaaagagagtcagcagacctgcgttctgacgagattgagtctcgc
gtgaacagcggcagcatggacggtctcaacgtgacgcttcgacccagggccctgcccacc
tccgccactgcccaatccttggcatcatcctcctcgccgcccaccagcggccactcaaca
cctaaacaccacgcacgcaacaccagccaccatctaggcatcatgactctgccgagcgac
ttgaggaaacaccgcaggaaagttgcatcgccagtggaagtggacaaagccaccatcaag
tgtgagacatcgcctccttcctccccccgcagtttacgactggaaaccaatttcgctcag
ttcacaggcagcctggaggatggacgaggcaagcaaaagaaaggaatcaagtcatctatc
ggccggttgtttgggaagaaggagaagggtcgactcgaccaaactatgggcagggatgga
cagcctttaccggcgttatcagactttgacatgggcatcggtgacactatgactctggga
aaactgggcacgcaggccgagagggatcgcaggatgaagaaaaaacatgagcttctggaa
gacgccaggaaaagaggtctgccgtttgcccagtgggatggtcctactgttgtctcctgg
ctagagctgtgggtgggtatgccggcgtggtatgtggcagcctgtcgtgccaacgtgaag
agcggagccatcatgtcggctctgtcagacacagagatccagagggagatcggcatcagc
aaccctctgcaccgactcaaacttcgcttggctatccaggagatggtctccctcaccagc
ccctccgcaccgctcacctccagaacgtcctccggaaatgtgtgggtgactcatgaagag
atggagaacctggcttcctccactaaagcggagaatgaggagggcagctgggcacagact
ttggcgtatggagacatgaatcatgagtggatagggaacgagtggctacccagccttggt
ctgcctcagtaccgatcctacttcatggagtgtctggtggacgcgcgcatgctggaccac
ctgaccaagaaggatctgaggagccacctcaagatggtggacagcttccacagggctagt
ctgcagtatgggattatgtgcttgaagaggctcaattatgacaggaaagacctggagcgt
cggagagaggacagccaacatgatatgaaagatgtgttggtgtggaccaatgaacaggtg
atccactgggtccagtccattggtctgagggagtatagtggcaacatgttggagagcggc
gttcatggagcgctcctctctctggatgagaccttcgactacagcagcctagcactcatc
ctgcagatccctatgcagaacacacaggcacggcaggttctggaaagggagttcaacaac
ctgttagccttggggaccgaccgacgactagaggagagtggggatgacaagtcttttcga
cgctcgccgtcgtggcggaagaggtttcgggcacgtgagggaggggcagggctggggatg
atggcgggctccatggaaacgctgcctgccggcttccgcatgccctccatgtccatgcca
ccttctgtgaatttgatgcccaagaagcagctgcaacctgaagctcctcctccggcaccc
ccgagactcgacccctcggcagtgaggacctattcatgctaa
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