Thunnus thynnus (Atlantic bluefin tuna): 137181929
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Entry
137181929 CDS
T11154
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137181929 (tmf1)
Membrane trafficking [BR:
tty04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
137181929 (tmf1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
Motif
Other DBs
NCBI-GeneID:
137181929
NCBI-ProteinID:
XP_067444157
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Position
4:complement(28043475..28056189)
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AA seq
1168 aa
AA seq
DB search
MSWFNASHLSSFAKQALTTAQKSIDRVLDIKEEGDQWGDTTVMPFDDVTIPGKLSLSGGW
GMTQWEAPPEEKTITPPPSSEAITTPVTRTVVDESENFFSAFLSPGDAPSVTKAQVVSVP
PAKSQRRPQEKEKKSKEAVVQIDVDSQKSGSADKSHENQTVTDGQPMESESLPEAPYPDT
VLLQPVSPVSACSDLPCNPDSKTTNTGRVKTDVGSTDSVDSKTEQPQTPSEHQVDQSAAE
PSEPSAVNSEPKSSTPSDPSPPQSSKEVLLEQKDSKVEDRQNDTPSPPVSAFSSGTSTTS
DIEVLDHESVLSESSASSRQETGEGKGGLHLMQGSFQLLTASTCGDFPRLEDYPKLTESC
GSSSDAFERIDSFSVQSLDSRSVSEVNSDDEIPGSRTLASVTSGPAPLTVVSSAVCQKQE
DRVVEKEGEVEEEEEEEEEGFTETMREQSLDEMEESGRSATPVNSEQPEELTEQEQESEA
NVTLSDPTSKADEQLTPPITEEMKSVSTFQILELQKVIDELSGRLEKRESQLLAVSKDKA
RLEEDCDNLKDEVISLKEESSTVQSLKDEFTQRIADAERKAQLACKERDIAKKEIKGLRE
ELSTRLNSSDTMEIIKEKEEQIRGLLEEGEKLSKQQLQHSNIIKKLRVKEKESDTKINKQ
QKKVKEQEEELRHLQQVLDGKEEVEKQHRDNIKKLNGVVERQEKELSRLQTDSEELQEKN
RSLQAALDNSYKELAELHKANASRASEVEEAALSRETQAKEQLSLALEKAQEEGRMQQEA
LANQVADLRLALQRAEQQQARKEDYLREEISELQQRLQEAETRNQELSQSVTSATRPLLR
QIENLQASLGGQTASWEKLEKNISDRLVDAQAQLAVAVEKERSATEELLSIKSQLASVES
QNSLLRQEKARLLAQTEAEKNKREKLEDESSREHVELENLRGEHSRMLEEAKKEKLLLAN
QLEMEKMKVEQEKKKCYLAQEALKEKERKAMTHSVGEPPASSTPSLSRSSSISGVDNAGL
HTSILSQDDSLDHSLGTMTMSMSMSGTNLYEAARLSGGSSIIENLQSQLKLREGEIAQLQ
LEISGLERSRSVMAEELVRLTNQNDEMEEKVKEIPKLKIQLKDLEQRHNTILQMYGEKAE
EAEELRLDLEDVKNMYKTQIDELLQNQK
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcatctcacctgtccagcttcgctaaacaagctttaacaacagct
cagaaatcaatcgaccgagttctggacatcaaagaagagggggaccaatggggagacaca
actgtaatgcccttcgatgatgtcacaatacctggaaagctgtcactaagtggaggatgg
ggaatgacacagtgggaagcaccacctgaagaaaagaccatcactccccctccctcctct
gaggccattactactccagtcacccgcacagttgtggatgaatccgaaaactttttcagt
gcctttctgtcacctggagatgcaccaagtgtcaccaaagcccaggtagtgtctgtaccc
cccgctaagtcccaaaggcggcctcaggagaaggaaaagaaaagcaaagaggctgtggtc
caaatagatgtggactcccaaaagtcaggatctgctgataagagtcatgagaatcagaca
gttactgacggccagcccatggagtccgagtctttgccagaagctccttatcctgacact
gtcctcttgcagccagtttctcctgtttctgcttgcagtgatcttccttgtaaccctgac
agcaaaacgaccaatacaggcagagtaaaaacagatgttggctctacagattctgtggac
tcaaaaacagagcagccacagactccgtcagaacatcaggttgatcagagtgccgcagag
ccctctgaaccttctgctgtcaactctgaacctaaaagctctaccccttctgatccatca
cccccccagtcctctaaggaagtactcctagagcaaaaagactcaaaggttgaggaccgt
caaaacgataccccctcccctccagtcagcgccttctcctcaggaacctctaccaccagt
gacattgaagtgctggaccatgagagtgtgttgagtgagagctcagctagctccagacaa
gagacaggggaaggaaagggtggcctgcacttaatgcagggctccttccagcttctcact
gcctccacctgtggagatttccctcgtctggaggactaccccaaactcacggagagctgc
ggctcctcctcagatgcatttgagcgcattgattcattcagtgtgcagtcactggatagc
cggagcgtcagtgaggttaactcagatgatgagatccctggcagtcggacactagcgtcc
gtcacttcaggccctgcacctttaacagttgtatcatcagctgtatgtcagaagcaggaa
gacagagtggtggagaaggaaggagaggtggaggaagaagaagaggaggaggaagagggc
ttcactgaaaccatgagggaacagtcactggatgagatggaggagagtggacggagtgcg
acacctgtgaatagtgagcagcctgaggagttgacagagcaggaacaggaatctgaggct
aatgtcactctgtctgatcccacctccaaagcagatgaacagctcactccaccaatcaca
gaggagatgaaaagtgtatcaacatttcagattctggagcttcaaaaggtcattgatgag
ctgtcaggccgccttgagaagagagagtctcagctgttggcagtcagcaaagacaaggct
agactggaggaggactgtgacaatctcaaagatgaagtgataagcctgaaggaggagagc
tccactgttcagtcgcttaaggatgagttcacccagcgcatagcagatgcagagaggaag
gctcagctggcctgcaaagaaagagacatagccaagaaggagataaagggcttgcgagag
gagctctctacaagactaaactccagtgatacaatggagatcatcaaagagaaggaagag
cagatcagagggctgctggaggagggtgaaaagttgtccaagcagcagctgcagcacagc
aacatcatcaagaaactgcgtgtgaaggagaaggagagtgacacaaagatcaacaagcaa
cagaagaaagtcaaggagcaggaggaagagctcaggcacctgcagcaggttctggatggg
aaggaggaggtggagaaacagcacagggacaacatcaagaagctgaacggtgtggtggag
cggcaggagaaggagctgagcaggctgcagacagactctgaggagctgcaggagaagaac
aggagtctccaggctgctctggacaactcttacaaggagctggcagaacttcacaaggct
aatgccagcagagccagtgaggttgaagaagcagccctgagcagggaaacacaggccaag
gagcagctcagcctggctcttgagaaggcccaggaggagggcaggatgcagcaggaggcc
ctggccaaccaggtggctgacttgaggctggccctgcagagagctgagcaacagcaggcg
aggaaagaagattatttgagggaggagatcagcgagctgcagcagaggctccaggaggca
gagactaggaaccaagagcttagtcagagcgttacctcggcaacacggcctctactgcga
caaattgagaacttacaggcctcactgggtggacaaacagcatcctgggaaaaactggag
aagaacatctctgataggttagtggatgcccaggcgcagctggctgtcgccgtggagaaa
gaacgttcagcaacagaagaactgctgtccatcaagtcccagctggcctctgttgagtcc
cagaattccctgctccgccaggagaaggctcgactcctggcgcagacggaggctgagaag
aacaagagagagaaattggaagatgagagcagcagggagcatgttgaattggagaatctg
cgaggagaacacagtcgaatgctggaagaagcgaagaaagaaaagctgctgcttgccaat
caactagaaatggagaagatgaaggtggagcaagagaagaagaaatgctatttagcacaa
gaggcactcaaggaaaaggagcggaaagccatgacccactctgtaggagagcctccagcc
tcttccacaccttcactgtcccgctctagctccatcagtggggtggacaatgctggtctg
cacacttctattctttcccaggatgactctttagaccactcgctgggcaccatgaccatg
tctatgtcgatgagcgggaccaacttgtatgaggccgccaggctctctggaggctccagc
atcatagagaacctccagtctcaactcaaactgagagaaggggaaatagcacagctgcag
cttgagatctctggtctggagaggagtcgttctgtgatggcggaagagctggttcgactc
actaatcaaaacgatgagatggaggagaaggtgaaggagatccccaagttgaaaattcag
ctcaaggatcttgagcagaggcacaacactatcctgcagatgtacggagaaaaggctgaa
gaggcagaggagctgagactggaccttgaagatgtgaagaacatgtacaaaacacagatt
gatgaactgctgcagaaccagaaataa
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integrated database retrieval system
