KEGG   Thunnus thynnus (Atlantic bluefin tuna): 137182022
Entry
137182022         CDS       T11154                                 
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
  KO
K11985  TRAF-interacting protein [EC:2.3.2.27]
Organism
tty  Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:tty00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tty04121]
    137182022 (traip)
Enzymes [BR:tty01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     137182022 (traip)
Ubiquitin system [BR:tty04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    137182022 (traip)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 CEP135_TSGA10_CC zf-rbx1 ATG16 zf-C3HC4 Rod_CreS zf-RING_UBOX CCDC39 zf-C3HC4_3 CCDC170_1st zf-RING_5 zf-ANAPC11 HmpF zf-RING_11 CCDC18_2nd zf-C3HC4_4 WEMBL zf-RING_Vps41 COG3_N zf-RING_16 LEKR1 FAR1_N CALCOCO1 Sec3_CC AAA_13 DUF2968 KxDL CEP135_N FKBP15 zf-RING-like HIP1_clath_bdg T3SSipB LIP-1 Gp58 Zn_ribbon_8 CCDC171 FPP GAS zf_RING_Vps8 RING_XB3-XBAT31 Fez1 Lzipper-MIP1 ODF2_C Mua KASH_CCD bZIP_1 RING_Ste5 zf_RING_Vps8_fungal PII1_coiled_coil RINGv Filament FANCL_C DUF8567 Phage_scaffold ODF2_N PspA_IM30 zf-Nse CCDC113_CCDC96_CC Fzo_mitofusin Aminoglyc_resit ZapB_rel Spectrin_Anc-1 DUF745 CC4_CEP85 USP8_interact Aida_N DUF948 CC_Bre1 Taxilin
Other DBs
NCBI-GeneID: 137182022
NCBI-ProteinID: XP_067444351
LinkDB
Position
4:complement(29548707..29553493)
AA seq 449 aa
MPIRAYCTICSDFFDHSRDVAAIHCGHTFHYECLLQWFQTAPTKTCPQCRKQVSTRHIIS
KLYFDIGGEEEGTTDPESLQNELDRMKALLSSKERDWRDRQKVVDSLKDTVDKQRRDLDS
VRKEIIEKEMLCSALRKQMTYLETQHNDAQAAKEEARRLRTKMKTFESLDVLLQGQRADV
ESMIRDMGVSQAAVEQLSIYCISLKKEYDNLKGSLKSSNDMCEKLKREVLTSNNKLQKAT
KEVNQSKDDMKSLQNDLANADKEITSLKKKVEFLQKTLSTPTRTNEALSRLVFESPAPME
LKKPHLHQPADSEDIDLNITYDITTPDDMAKRPARVPSKKMRLDPPVSSVSKQNEKTSSL
IKARDEDVSMDPFLRNSLLFRKKTFGSMLDPQRKPGAVRTGYDGLGGRTKFIQPSPLAEI
RPLMKAKRKKVTRPPPKIATCLTLDSFLE
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcctatccgagcatattgtacaatatgctccgatttcttcgatcactccagagatgtt
gctgccatccactgcggacacactttccactatgaatgtcttcttcagtggtttcagaca
gcccccacaaaaacatgcccacaatgtcggaaacaggtcagcaccaggcacattatcagc
aagctgtactttgacattggtggagaggaggagggcacgacggacccagaaagcttgcag
aatgagcttgatcgaatgaaggccctcttaagttctaaagagagagactggcgggacaga
cagaaggtggtggacagtttgaaggacacagttgacaagcagaggagagacctggacagt
gtgcggaaagagatcattgaaaaggagatgctctgttctgctctcagaaaacaaatgaca
tacctggagacacaacataatgatgctcaggctgccaaggaggaggcccgcagactcagg
accaaaatgaaaacctttgaaagtctggatgtgttgttacagggccagagagcagatgtg
gagtccatgatcagggatatgggtgtcagtcaggctgctgtggagcagctctccatctac
tgcatctccctcaaaaaagagtatgataatttaaagggaagccttaagtcttcaaatgac
atgtgtgagaagctgaagagagaagtgctcacatcaaacaacaagttacaaaaagccaca
aaggaggtgaatcaaagtaaagacgatatgaagtctctgcagaatgatctggccaatgct
gacaaagagatcactagtctgaagaagaaggtggagtttcttcagaagactctgagcacg
ccaacacggacaaatgaagccctcagtcggcttgtctttgaaagcccggctccaatggag
ctgaaaaagcctcacctccaccagcctgcagacagcgaggacattgacctcaacattacc
tatgacatcacgaccccagatgatatggctaaaagaccggcgcgggtcccatccaagaag
atgcgtcttgaccctccagtgtcatctgtgtccaaacaaaacgagaaaacttcatcttta
atcaaggctcgagatgaggatgtatccatggatccatttttgaggaactccctcctcttc
agaaagaagacttttggtagcatgttggaccctcagaggaagcctggagctgtgagaact
ggttatgatggattaggaggacgaactaaattcatccaaccttctcctttagcagagatt
cgcccactgatgaaagctaaaaggaaaaaggtgacgaggcctccacccaagattgccact
tgcctgactttggacagcttccttgagtaa

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