Thunnus thynnus (Atlantic bluefin tuna): 137182173
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Entry
137182173 CDS
T11154
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04514
Cell adhesion molecule (CAM) interaction
tty04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
137182173 (nfasca)
04517 IgSF CAM signaling
137182173 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tty04515
]
137182173 (nfasca)
Cell adhesion molecules [BR:
tty04515
]
Immunoglobulin superfamily
L1 family
137182173 (nfasca)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
Fn3_PBP1
Fn3_ROS1
C2-set_2
MUC7
BiPBP_C
DUF3157
Motif
Other DBs
NCBI-GeneID:
137182173
NCBI-ProteinID:
XP_067444585
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All DBs
Position
4:complement(35039049..35181469)
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AA seq
1368 aa
AA seq
DB search
MLGQGGHAALALMSLLILLWHEAAPIEVPQDPKILQDLKQPPTIVKQSVKDYIVDPRDNI
IIECEAKANPVPTFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCF
ATNEHGVAISNKILLRVSKAPLWPKEVLEPVTVTEGHPLVLPCNPPPGLPPPFTFWMNSG
MSPIPQDKRVSMGLNGDLYFSNVLAQDAQTDYSCNARFLFTHTIQQKNPFTLKVQTKEPY
NDTSYNATDPYGGRKVAESTPTFLSPSGSESSKMVLRDEQLLLECIAAGLPTPTIKWFKK
GGDLPGRKVKFENYNKTLKIINVSEEDAGEYVCMANNHLGSIRHSIFVQVKAAPYWLDKP
TNLVLAPDENGRLVCRANGNPKPNIQWLVNGQPINNSLPNPSRQMMGDTIIFRSVQMGSS
AVYQCNASNQHGYLLANAFVSVLDMPPRMLGPKNQLIKVIENNRTFLDCPFFGSPLPELR
WFKNGQGSGLDGGQYRVYINGSLEIKRARAEDEGTYTCVANSIMGTAENQVRLEVKEPTR
IVRAPEHQSTIRGSMARFDCKVKSDPSLPITVAWTKDDKPLYLGWRIKKDEESLTIPNVN
EGDEGTYTCTVKSEIDQDSASARLTVLEEASLNPSVSSALPPDRPDPPMDLDLSDPAARS
VRLTWIPGNDHRSPITQFLVQFEEDHWDPGRWQDLSTYPGDLNSVILQLAPFVNYQFRVI
AINAVGQSQPSRPSPRYKTSGAAPDAIPRGLRGWGSKKDNMEISWEPLLDLERNGPNLHY
SVWWRRKDSGEEWNNVTTVGSKHVVQNTETYVPYEIKIQARNEFGSGPESNMVVGYSGED
KPTDPPTELQVLKVDSTKANIQWKPVDLNSVQGEFKEYRLYYWRESSQVPGLVVSKENKT
KGFYSTVAEPSGILSNLVPYSRYKMLMVVANNGYEGPPSNTVDFTTKEGVPDAPRSFRIN
RRSFDTLHLEWDKPLEPNGILIGYQLKYQTVNGSRVGRPQLETFLPNMTEFTLRLQDRST
RYKFYLSALTQVGAGEVFAEESPHFANEENFTDATGLVELTDASVASALTPTPPPIAPLP
PTTIAPTTISTSTTTTPTTTTPTTTTTTTTTTTTTEATTTTTPPVLISHKHTDNVLVAPG
LEIWNLTVEPNSNYTNVSWRHNFPADSSEFVLEFTLDSNKTMKIVPVKQPPITVTDLIAG
AKYHLRVYSHELNSISSKSITFKTKTAYIDQVDIATQGWFIGLMCAIALIILILLIVCFI
KRSRGGKYPVRDKKDLPLDPVDQKDQDGSFDYHSDEDNKPLQDSQTSLEGNVKESDDSLV
DYGEGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcagggcgggcatgcggccctggctctcatgtcattactgatactactgtgg
cacgaggcagcacccatcgaagtcccacaagacccaaagatcctgcaagacttgaagcag
ccccccactatagtgaagcagtcagtgaaggactacattgttgaccccagagataacatc
atcattgaatgtgaggccaaggccaaccctgtgccaacgttctcatggcgaaggaacggg
aagtttttcaacatcgggaaagatcctcgggtgacgatgcggaaacgctccggaaccctg
gagatcggtttccgcagcggaggacgaccagaggactatgagggagaatatcagtgtttc
gccaccaatgaacatggagtggctatttccaacaaaatcctgctgcgcgtctccaaggct
cctctgtggcctaaggaggtgctggagccagtgacagtgactgaaggccacccgctggtc
ctgccctgcaaccccccaccaggcctgcctcctccattcaccttctggatgaacagcggt
atgtctccaatccctcaagataagagagtatccatgggtctaaatggagacctgtacttt
tccaatgttttggcccaagatgcccagactgactacagctgcaacgctcgcttcctcttc
acacacaccatccagcagaagaaccctttcacactcaaagttcagaccaaggagccgtat
aacgacacatcttacaatgccactgacccctacggtggccgtaaagtagccgagtccaca
ccgaccttcctctcaccgtcagggagtgagagctccaaaatggtgctacgagacgagcaa
ctgctgctggagtgtatcgctgctggacttcccacacctaccatcaagtggtttaagaag
ggcggagacctgccaggaaggaaagtgaagtttgagaactacaacaagaccctgaaaatt
atcaacgtgtcagaggaggatgctggggagtatgtatgcatggccaacaatcatttaggc
agcatacgccactccatctttgttcaggtcaaagcggctccttactggctggacaaacca
acaaacctggtgctagccccggatgagaacgggcgccttgtgtgccgggccaatggcaac
cctaaacctaacatccagtggctggtcaatggccaacctattaacaactctctgcccaac
ccgagccgtcagatgatgggtgacaccatcatcttccgctcagtgcagatgggaagcagt
gctgtctaccagtgcaacgcctccaaccagcatggttatctgctggccaacgccttcgtc
agcgtccttgacatgcctccaaggatgctgggccctaaaaaccagctgattaaagtcatt
gagaacaacagaaccttcctggactgtcccttcttcggttcccctctgccagagttacgc
tggtttaagaatggacagggcagtggcctggacggtggtcagtaccgtgtttacatcaac
ggctctctggagatcaaacgggcccgagcagaggatgagggcacttacacctgtgtggcc
aacagcatcatgggcacggccgagaaccaggtccgcctggaggtcaaagagcccactcgt
atagttcgagcccctgagcaccagtcaaccatcagaggctccatggctcgcttcgactgt
aaggtgaagtctgatcccagcctacccatcaccgtggcttggacgaaggatgacaagcct
ctctatctgggatggaggataaagaaggacgaggagtcactgaccatccccaatgtcaac
gagggtgacgagggaacgtacacctgtactgttaaatctgagatagaccaggactcagct
tcagcccgcctcactgtgttagaggaagcctccctcaacccctcagtctctagtgccttg
cctccagaccgtccagaccctcccatggatctggatctgtcagacccagcagcccgcagc
gttcgcctcacctggattcctggaaatgaccacaggagccccatcacacagttcttggtc
cagtttgaggaggaccactgggacccgggtagatggcaggacctatccacttaccccggg
gacctcaactctgtcatcctgcagcttgctcccttcgtcaactaccagttcagagtcatt
gccatcaatgcagtgggccagagtcagcccagccgcccctcaccacgatacaagaccagc
ggagctgccccagatgccatacccagaggtctacgaggatggggctccaagaaggacaac
atggagatcagttgggagcccctgcttgatctggagagaaatggcccgaacctgcactac
agtgtgtggtggagacggaaggattcaggggaggagtggaataacgtgaccacggtgggg
tccaaacatgtcgtccaaaacacagaaacatatgtgccttatgagatcaaaatccaggcc
aggaatgagtttggatcaggacctgagtctaatatggtcgttggatactctggagaggac
aagcccaccgaccctcccactgaactgcaggtgttaaaggtggacagcaccaaagcgaac
atccagtggaaacctgtggaccttaactctgtccagggagagttcaaggagtacagactg
tactactggcgcgagtccagtcaggttccgggtctggtggtcagtaaggagaacaagacc
aaaggtttctacagcactgtggctgagccgtctggcatcctcagcaacctggtgccctac
tcgcgatacaagatgctcatggttgtggccaacaacggctacgagggtccacccagcaac
acggtggacttcaccactaaggagggagtgccggatgctcccaggtccttcaggattaat
cggaggagttttgatactctccacctagaatgggacaaacctctggagcccaatggcatt
ctgattggataccagctcaagtaccaaacagtcaatggttccagggtgggtcgtccccag
ctggagactttccttcctaacatgacagagttcacccttcgcctgcaagaccgatctacc
cgctacaagttctacctctcagcgctcacccaggtgggagcaggggaggtctttgctgag
gagtccccacactttgccaacgaggaaaactttactgatgctacaggtctagttgagctt
accgacgcctctgtggcttcagctctcactcctactcctcctcctattgctcctcttcct
cctactaccatcgctcctacaaccattagtacctcaactactaccactcctacaacaacg
actcctaccactactactactaccaccaccaccaccactacaactgaggcgaccactact
actacacctcctgtgctgatctcccacaagcataccgacaatgtgttggtggcccctggg
ctggagatctggaatctgacggtggagcctaacagtaactacactaatgtcagctggaga
cacaacttcccggccgacagcagcgagtttgtgctagagttcacactggacagcaacaag
acgatgaaaattgtaccagtgaaacagccccccattacagtgacggatctgatcgcaggc
gccaagtaccatctgagggtttactcccatgagctcaacagcatcagcagcaaatctatc
acctttaagaccaaaacagcctacatagaccaggtagacatagccactcaaggctggttc
atcggcttgatgtgtgccatcgctctcatcatactgatccttcttatcgtctgcttcatc
aagaggagtcgcgggggcaaatacccagtccgtgataaaaaagatctcccattggaccct
gtggatcagaaagaccaggatggatcctttgattaccacagcgatgaagacaacaagcct
ctgcaggacagccagacatcgctggagggcaacgtgaaggaaagcgacgacagcctggtg
gactacggcgaaggcggtgatgggcagttcaacgaggatggctctttcatcggccagtac
acggtgaagaaggacaaggacgagacggagggcaacgagagctccgaggccacctcaccc
gtcaacgccatctactcactggcgtag
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