Thunnus thynnus (Atlantic bluefin tuna): 137182178
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Entry
137182178 CDS
T11154
Name
(RefSeq) laminin subunit beta-3-like isoform X1
KO
K06244
laminin, beta 3
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04382
Cornified envelope formation
tty04510
Focal adhesion
tty04512
ECM-receptor interaction
tty04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137182178
04518 Integrin signaling
137182178
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137182178
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137182178
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
CCDC171
LAMB1
Laminin_I
CCDC39
EzrA
STB2_C
KASH_CCD
Tropomyosin
CdvA
DUF8567
DUF3450
LEKR1
CCDC18_1st
ODF2_C
DUF948
DUF4407
FKBP15
WEMBL
IFT57
Motif
Other DBs
NCBI-GeneID:
137182178
NCBI-ProteinID:
XP_067444602
LinkDB
All DBs
Position
4:complement(35295745..35322829)
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AA seq
1165 aa
AA seq
DB search
MRILLLLAAVAAVSQAQTDCSRGACYPPSNDLLLGRAHQLRASSTCGLTGSEVYCTPYQQ
RRMKCCPCDSRNPNGQLAHTVQDVLSTAGPDRWWQSKKEVNAVTLQLDLNNLFQLDRLTL
NFKGPRPSALIIERTLDNGRTWEPALYIAADCQKAFPGVPTSTPLTMDQTYCYTLPPTGN
PYQDQMIQFSPLRQYAYVPVPNSQKIEDVTGLTGLRVRLAELGDVPRLPGRALSRFYALK
EMRVIGSCMCHGHANRCLPEAYNNAQSNSIQVNPQCDCQHNTAGVNCERCADLYNDLPWR
PAEESNTHTCKRCECNNHAQRCHFDEEVYKASGSRSGGVCEGCMHHTTGPKCDQCAPGYQ
PNPRSRMDRPDACIRCSCSAEGTVNEGRCDDSSGSCQCKVNVEGPRCDRCKRGYYGLSAS
NPLGCSKCSCSPDGSLSGVCDPVTGQCPCRSHFHGLTCEVCAKGYWKPFQSGRCEPCNCD
PTRSLSDTCDQQTGQCQCRPGFGGQKCTECPDNTYGDPLIGCRPCLCDAEGTLPEVCDKQ
TGACLCRQGVTGARCDSCSRGHCDSFPACETCPSCYFTLDAQRQNLSLALERLSPSFPSR
PGNGGLGNFGPRILTLEANLNLIRNSISLPPSTARQIDDALSQLDKLRDQVDKVNDDLSP
LKRTPGLDSELDKLQGLLDSLRVQYNAKKDAMTNSINPNNAGAFSAIKNAYDESTDAAKK
VKASGKTVKESADVREETKDLQNRVQPANTKDLDKLNQNMASKPNLTPVAKQVCGSVRSE
PCTPLQCEGGDLCPPEGTPPCEKGEKCVGALPLSKRANADAQDVKNRLDKLTGKITDAAE
KLQKTQETTNQVRQSSEKLSNKMKKTRDELEDDLKETRDVVKELKDFLSDPSSNLAHIQE
VSDWILKAKLPLNLATLKRKLEDLKNLAANLPDSKAVLNEAEPQLDAARKLLQKAQDTRD
TALGVKADVDGLLAGFGAVEGSLSDLEDRLQDSMDLMDTLNDNLTKAKDQLSPAEKTLDD
VSTLMKPMKPQLDELKDLLQSGGQQAQEAQDNADKAEDEAADANEDLLSLQKQLDRLKDK
AATSGSGGEAGPVGDRLAKLRQDAGALANTTEDMMKSLEGKADSLRSLQGEILQKSSKLE
GLDAKLKDLLAKLRKKAHDLTVCQG
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagaatacttttactactagctgccgtggctgcagtatcacaggcccagactgactgc
tctcgaggggcttgttacccacccagcaatgacctgctgctgggcagggctcaccagctc
cgagcctcttccacctgcggcctcaccggctctgaggtctactgcaccccataccaacag
aggaggatgaagtgctgtccatgtgactccaggaacccaaacggtcagctggcccacact
gtccaggatgtcctgtccactgccggaccagacagatggtggcagtctaagaaagaggtg
aatgcagtcactctccagttggacctcaacaatctgttccagcttgacagactgacactg
aacttcaagggtcctcgtcccagtgctttgattatagagaggacactggataatggcagg
acatgggaacccgccctctacattgctgcagactgtcaaaaagcattccctggtgtcccc
acttcaacacctcttaccatggaccagacttactgctacactctgccccctactggaaac
ccataccaagatcagatgatccagttcagtcctttgcgtcagtacgcttatgtcccagtt
cccaacagccagaagattgaagatgtgactggcttgacggggttgagggtgaggctggca
gagctgggtgatgtgccacgtctaccaggcagagctctcagtaggttttacgcccttaag
gagatgagggtgattggcagctgtatgtgccatggacatgccaaccgatgcctaccagaa
gcctacaacaacgctcagtccaacagcatacaggtgaaccctcagtgtgactgccagcat
aacacagcaggtgtgaactgtgagcgctgtgctgatctctacaatgatctgccctggaga
cctgcagaggagagcaacactcatacctgcaaacgctgtgagtgtaacaaccacgcccaa
cgctgtcattttgacgaggaggtgtacaaggccagtggctcaaggagcggaggtgtgtgt
gaaggttgtatgcaccacaccacagggccaaagtgtgaccagtgtgccccaggctaccaa
ccaaacccccgcagccgaatggatcgtcctgatgcctgcatacgctgtagctgcagtgcg
gaggggacagtgaatgagggccggtgtgacgatagctcaggctcatgtcagtgtaaagtg
aacgtggaaggcccccgctgtgaccgctgtaagagaggctactacggcctgagcgcttct
aaccctctgggctgctccaagtgctcctgttctccagacgggtcactgtcaggtgtttgt
gacccagtgaccggccagtgtccctgtcgttcccacttccacggcctgacctgtgaggtg
tgtgcaaaaggctactggaaaccattccagtcaggacgatgtgagccttgcaactgtgac
cccaccaggtccctcagtgatacctgcgaccagcagacgggtcagtgtcagtgtagacca
ggctttggaggccaaaaatgtaccgagtgcccagacaacacatacggagacccactcatt
ggctgccggccgtgtctgtgtgatgctgaaggaacccttccagaagtttgtgacaagcag
acaggagcctgtctatgtcggcagggtgtcaccggggctcgctgtgactcctgcagtcga
ggacactgtgactccttccctgcctgtgaaacatgtccctcctgctacttcaccctggat
gcccagcgtcagaacctcagcttagctttggagagactctccccaagcttcccttctcgt
ccaggtaatggtggtcttggaaactttgggccacgcatcctcaccctggaggccaacctg
aacctgatccggaactcaatctcccttccacccagtactgccagacagattgatgatgct
ctgtcccagctggacaagctcagggaccaggtggacaaggttaatgatgatctttcaccc
ctgaaaagaacacccggtctggactcagagctggacaaactgcagggtctgctggacagc
ctccgtgtgcagtacaatgccaagaaagatgccatgacgaactccatcaatcccaataat
gcaggagcattctctgccatcaagaatgcctatgatgagtctacagatgcagctaagaaa
gtaaaggccagcggaaaaacagtgaaagagtcagctgatgtcagagaggagactaaggac
cttcagaaccgagtacaaccagctaacaccaaagatctggacaaactgaaccaaaacatg
gcctccaaacctaacctcacccctgtggccaaacaggtatgtggcagtgttcgctcagag
ccctgcaccccactccagtgtgagggtggggacttgtgtccaccggagggaacaccacct
tgtgaaaagggagaaaagtgtgtgggtgccctgcctctcagcaagagggcaaacgctgat
gctcaggatgtgaaaaaccgactggacaagctgaccggaaaaatcacagatgctgcagag
aagctccaaaaaacacaagagacaaccaatcaggtgagacagtcttcagagaagctgtcc
aataagatgaagaagaccagagacgaactggaagatgacttaaaagagacgcgtgacgtt
gtgaaagagctcaaagacttcctgtcagacccgtcctccaacctggcccacatccaggag
gtgagcgactggatcctgaaagccaaactgcccctcaacctggccactctgaagaggaag
ctggaggacctcaagaatctggcagccaatctaccagacagtaaggccgtgttgaatgag
gccgagccacagctggatgcagccaggaaactgctgcagaaagcccaggacaccagggac
acggcactgggggtaaaggctgatgtggatgggcttctggcaggcttcggtgcagtggag
ggctccctctctgacctggaggacagactgcaggacagcatggatctcatggacactctg
aacgacaacctgactaaggccaaagaccagctgagccctgcagagaagactctggatgat
gtatcaacactgatgaagccaatgaaaccccagctggacgagctcaaagacctgctgcag
agtggaggccagcaggctcaggaagcacaggacaatgcagacaaagctgaagatgaagca
gctgacgcaaatgaggacctgttgtcattgcagaagcagctggatcgtcttaaagataag
gctgctaccagtgggtctggtggggaggcggggccagtgggggatcgactggcaaagctg
cggcaggatgctggagctctggccaacaccactgaagacatgatgaagtctctggaaggt
aaagcagattccctgaggtcgctgcagggtgagatccttcagaagtcatcaaagcttgaa
ggacttgatgccaagcttaaagaccttttagcaaaacttcgaaagaaagcccacgacctc
accgtctgccagggctga
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