Thunnus thynnus (Atlantic bluefin tuna): 137182570
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Entry
137182570 CDS
T11154
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
137182570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tty04121
]
137182570
Enzymes [BR:
tty01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
137182570
Ubiquitin system [BR:
tty04121
]
Ubiquitin ligases (E3)
HECT type E3
137182570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
137182570
NCBI-ProteinID:
XP_067444972
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Position
5:complement(5920056..5930196)
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AA seq
994 aa
AA seq
DB search
MFSWGEDSQEGFRLRDGPDAAGVHITDLSAGHSVLAFVKRNGTAFIIRINESNDGRRVRG
KQKFVKSKEKIQAVSCGDDTVTLLTKTGRVLCVDSVHTSPTPRTPEALCNIPVSQVACGS
QHSVALTRDGQVYTWGQDSSGQLGLGKRELGANSPQHLRSLSAIPLVQIAAGGEQSFALS
VSGGVFSWGRNNCGQLGLGDTTDRHTPTLVHHLNMKKTIHISCGKDHTVILTKDGVVFTF
GSGQYGQLGHNSFSDELRPRLVAELWGAKVIKIACGRHHTLVMTDSKRVYSFGCGEQGQL
GHGEESHPSVPLPVQLPQDATDVPQILNIYAGGNCSFATCSFNEQEVHEGSNSDTMNNVT
QHCLDAMIDKWTSEHNSKSWKKIKQEIKRMFSSASCLNRSFLDRSNDKHFQTSQKHSGLN
LSVAQLAFQQLVEQDDVWARVEAAITQLIPSLEENPVGVEGLRIYLLLIELLHVIQKHNQ
QHSTNLAEALAAAIVRLSADNRQVIVDSWCSQSSSTVIKYVEVWRQTLSVILSFDPAPCN
SGVKNLLLVLQYMYNANNRTAGCQRIPDETFCLEINEAFLQEDVKLWRSVSKNKDVNQPL
ILCNFPFVMDLKSKIIAFDINADWTQMEHQQVVWTVFGWVPQANPQFFELKLKRASLLEG
TFKQLAAAHPSALKKPLVVYFDEDPNVTDVYKRDLFHHLFYNLVSSKSGMFMFNDSKTLA
WFPSKATEEDKTNFFLFGVLCGLALYNKSIIHLPFPLALFKKLLDVEPSLEDMLEFSPSV
GKSLQHVLDYEDDVLEDLYMEFLIVWDGAQVDLDPQNPKKPVTSHNKKEFVDAYVNYAFN
TSVEGVFQEFRRGFFQVCDRHMVKLFKPNELQGMLVGQDVYDWAKLKQNTVYEWDYHGGH
PNILMFWEVFDELTEDQRKDFLWFLTGFRRAPFLGMDQIQMKIRVKQVQDSSSDQLFPQS
LTCHSILYLPLYSTKEIMRDKLTEAVVTKRGFSE
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgtggggagaggacagtcaggagggctttcggttgagagacggccccgatgca
gccggtgttcacatcacggatctgtcagcaggtcacagtgttctcgcttttgtcaagaga
aatggaaccgcgttcatcattcgcatcaacgagagcaacgatggaagaagagtgagagga
aaacagaagtttgtgaaatccaaggagaagattcaggctgtgagttgtggtgatgataca
gtcacactgctgactaaaacaggcagagttctctgtgtggactcagttcacacttctccc
actcccaggaccccggaagctctgtgtaacatcccagtatctcaggttgcttgtgggagc
cagcattcagtcgccctgaccagagatggtcaggtgtatacatggggccaggactccagc
ggccagctgggtctgggaaagagggagctcggcgccaattcaccccaacacctccgatct
ctgtcagcgatccccctggtccagatcgctgcagggggggagcagagcttcgccctctct
gtgtctggaggtgtgttcagctggggcagaaacaactgtggacagctcggactgggagac
actacagacagacacacaccaacccttgttcatcacctgaacatgaagaaaactattcac
atttcctgtggaaaggatcacactgtcattttaacaaaggatggtgtagtgtttacattt
ggctccggtcagtatggacagcttgggcacaactcattcagtgatgagctacgtcctcgg
cttgttgcagagctctggggggcaaaggtcatcaagattgcatgtggacgacatcacaca
ttagtgatgacagactccaagagagtctactcctttggttgtggagagcaagggcagctg
ggacatggagaggagagtcatccatctgtgccgctgcctgttcaactgccacaggatgcc
actgatgttcctcaaattctgaacatctacgcaggaggaaactgttcatttgcaacatgc
tcttttaatgagcaggaagttcatgaggggtcaaacagtgacactatgaacaacgtaaca
cagcactgtcttgatgctatgattgacaaatggacctctgaacacaattcaaagtcatgg
aagaagataaagcaggaaatcaaaaggatgttttcctctgcatcctgtttgaatcgaagc
ttccttgaccgaagcaatgataagcatttccagacctcacaaaagcactccggcttgaac
ttgtcagttgcgcagcttgctttccagcaactggtagagcaggatgatgtttgggctcgg
gtagaggctgctatcacacagttgattccttcccttgaagagaacccagtgggagtggag
gggctgaggatctatctgcttctcattgagcttctgcatgtgatccaaaaacacaaccag
caacacagcacaaacctcgctgaggcacttgctgctgccatagtacgactgtctgctgac
aaccgccaggtcatagtggacagttggtgctcacagtcctcctccaccgtgattaaatat
gtcgaagtgtggaggcagaccctctcagtgatcctgtcctttgatcctgctccttgcaac
tctggagtcaaaaacctgctactggtcctccaatacatgtacaatgccaacaacaggact
gcaggttgtcagaggatcccagatgaaactttttgtttggagattaacgaagcatttctt
caagaggatgtgaagctttggcgttcagtgtcaaaaaacaaggatgtgaatcagccactg
atcctttgtaacttcccattcgtgatggatctgaaatcaaagataatagctttcgacatc
aatgccgattggactcagatggaacaccagcaggtggtttggacggtctttggatgggtt
cctcaggcaaatcctcagttctttgaactgaagctgaagcgtgcgtcacttttggaaggc
actttcaaacaactggctgctgctcatcccagtgccctcaagaagccactcgtggtctat
tttgatgaggacccaaacgtcacagatgtctacaaaagagacttgtttcatcacttgttt
tataacttggtgtcaagtaaatctgggatgttcatgttcaatgactccaaaacactggca
tggttcccctccaaagcaacagaggaggacaagacaaacttcttcctgtttggggttctg
tgtggattggccttgtacaacaaaagtatcatacacttacccttcccactggctctgttc
aagaagctgctcgatgtagagccttcactggaggatatgttagagttcagcccaagtgtt
ggaaagagtctgcagcacgtcttagactatgaagacgatgtcctagaagacctttacatg
gagtttttgattgtctgggatggggcacaggttgaccttgatccccaaaatcctaaaaag
ccagtgacaagtcacaataagaaggagtttgtggatgcctatgtgaattatgccttcaac
acgtcagtggagggtgtgttccaggagttcaggcgaggcttcttccaggtgtgtgaccga
catatggtgaagctgttcaagccaaatgagttgcagggcatgctggtgggccaagacgtc
tatgactgggcaaagctgaaacagaacacagtttatgagtgggattatcatggcggccac
cccaacatactgatgttttgggaggtttttgatgaactgactgaagaccagaggaaagat
ttcctttggttcctgactggttttaggagggctccttttcttggaatggaccagatccag
atgaaaattcgagttaagcaagtccaggacagctccagcgatcagctcttccctcagtca
ctcacatgtcactctatcctgtatctgcccttatactcaaccaaggagatcatgcgagac
aagctgacagaggccgtggtaacaaagagaggattctcagagtga
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