Thunnus thynnus (Atlantic bluefin tuna): 137183673
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Entry
137183673 CDS
T11154
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tty03000
]
137183673
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tty03310
]
137183673
Transcription factors [BR:
tty03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
137183673
Nuclear receptors [BR:
tty03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
137183673
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
MIOS_a-sol
Motif
Other DBs
NCBI-GeneID:
137183673
NCBI-ProteinID:
XP_067447013
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Position
1:2154134..2260094
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AA seq
547 aa
AA seq
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MESSPQESASDPSMSCSEPGTPVTETPASLETLRGGEHLTPARRHSSSGTGSSSKGLSAA
VKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDR
TSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQQQQQQGPLL
VSHPGLGSPSPGESEPLSPHYGLSSTGLTELPDELGGYMEQNSPEGGSVSSKTDSGGGGG
GGGSGGYYLDIQPSPDQSGLDINDIKLEPLCDYRSSNGFFPYCSFSDGETSPTTSMAELD
HLVQVISKSHLETCQYLREELQQMSWQNFLQDEVESYQSKPREVMWQLCAVKITEAIQYV
VEFAKRIDGFMDLCQNDQIVLLKAGSLEVVFVRMCRVFDSQNNTVYFDGKFAGPEVFKAL
GCDDLITSVFDFAKSMCSLHLSEDELALFSAFILLSADRTWLQEKLQVEKLQQKTQLALQ
HVLQKNQREDGVLNKLRFKVSALRSLCSRHTEKLSAFRAVYPDIVRTHFPPLYKELFGAE
LTLQPDD
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtccccgcaggagtccgcgagcgacccgagcatgagctgctctgagcccggc
acgccggtcacggagacgccggcgagcctggagaccctgcggggcggagagcacctgact
ccggcaaggagacacagcagctccgggaccggctcttccagcaaaggtttgtcagcagcc
gtgaagaagacacacacatctcagattgaaatcattccctgtaagatctgtggagataaa
tcgtcggggatccactacggtgtcatcacctgcgagggctgtaagggtttcttcaggagg
agtcagcagagtaacgccgcctactcgtgtcctcgccagaaaaactgtctgatcgaccga
acgagtcgcaaccgctgccagcactgccgtctgcagaaatgtctggctgtgggcatgtcc
cgagatgctgtaaagtttggtcggatgtccaagaagcagcgggacagtttgtacgcggag
gttcagaagcatcgtctccagcagcagcagcagcagcagcagcagcagggtcccctcctt
gtgtcccaccccggcctcggcagcccgagcccgggcgagtctgagccgctgtccccccac
tacggcctctcctccacgggcctcaccgagctcccggacgagctgggaggctacatggag
cagaactcccctgaaggaggatcagtgtcgtcaaagacggactctggaggaggaggagga
ggaggaggaagtggtgggtattacctggacatccagccatctccggaccaatcaggactc
gatattaacgacatcaaactggagccgctgtgtgactacagatccagtaacggcttcttc
ccgtactgctccttcagtgacggagagacgtcgcccaccacgtcaatggccgaactcgat
cacctggttcaggtcatctctaaatctcacctggagacgtgtcagtacctgagggaggag
ctgcagcagatgagctggcagaacttcctgcaggacgaggtggagagctaccagagcaag
ccgcgggaggtgatgtggcagctctgcgccgtaaagatcactgaggccatccagtacgtg
gtggagttcgccaaacgtatcgacggcttcatggatctctgtcagaatgaccagatagtg
ctgctgaaagcaggttctctggaggtcgtctttgtccggatgtgtcgggtgttcgactcg
cagaacaacaccgtctacttcgacgggaagttcgcaggtccggaggtcttcaaagcttta
ggttgtgatgacttgatcacgtcggtgtttgattttgctaaaagcatgtgttcactgcat
ctgtccgaggacgagctcgctctcttctcagcgttcatcctgctgtctgcagaccggacg
tggctgcaggaaaagctgcaggtggagaagctgcagcagaagactcagctggctctgcaa
cacgtcctgcagaagaatcagagagaggacggagtgctgaacaagctcagatttaaggtg
tcagcgttgcgctcgctgtgcagtcgtcacacagagaagctgtcggcgttccgagccgtt
tacccggacatcgttcggacacacttccctcctctttataaggagctgttcggagctgaa
ctgactctgcagcccgacgactga
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