KEGG   Thunnus thynnus (Atlantic bluefin tuna): 137184138
Entry
137184138         CDS       T11154                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
tty  Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tty00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137184138 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tty03041]
    137184138 (bcas2)
   03400 DNA repair and recombination proteins [BR:tty03400]
    137184138 (bcas2)
Spliceosome [BR:tty03041]
 Complex B
  Other components
   Prp19 complex
    137184138 (bcas2)
 Complex C
   Prp19-CDC5 complex
    137184138 (bcas2)
DNA repair and recombination proteins [BR:tty03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    137184138 (bcas2)
SSDB
Motif
Pfam: BCAS2 Sterile THOC7 RRP36
Other DBs
NCBI-GeneID: 137184138
NCBI-ProteinID: XP_067447639
LinkDB
Position
6:8773897..8778588
AA seq 225 aa
MAGTASVAGEVFVDALPYFDQGYDAAGVREAAAALVEEETRRYRPTKNYLSYLLTPDFSA
FETEIMRNEFERLAARQPMDLLSMKRYELPAPSAGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQYGTNAWKVYNDNLAFMIEMAQKELQKFRKQIQDLNWQRKNDQLAGGAKLRE
LESNWVSLVSKNYEIERAIVQLENEITQLRQQQGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggccggaacggcttcagtagctggtgaggtgttcgtcgatgctttgccatattttgac
caaggttacgatgcagcaggtgtcagagaagcggctgcagcgttggtggaggaggagacc
agaagatacagaccgacaaagaactacctgagctacctgcttacacctgacttctctgct
tttgagacagaaatcatgaggaatgagtttgagcggctggcggctcggcagcccatggat
ctcctgagcatgaagagatatgagctgccggcgccttccgcaggacagaagaatgacatc
acagcgtggcaggagtgtgtgaacaattcgatggcccagctggagcaccaggcggttcgt
atcgagaacctggagctcatgtcgcagtatggaaccaacgcgtggaaagtctacaacgat
aacttggccttcatgattgagatggctcaaaaggaacttcagaaattcaggaagcaaatt
caagatttaaactggcagcgtaagaacgatcagttggcaggaggagccaaactgcgagag
ctggagtcaaactgggtgtctctggtcagtaagaactatgagattgagcgggccatcgtc
cagctggagaacgaaatcactcagctcagacaacagcagggggacgagaacaaggagaac
atcagacaggacttctag

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