Thunnus thynnus (Atlantic bluefin tuna): 137184345
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Entry
137184345 CDS
T11154
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137184345 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137184345 (exosc10)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
137184345 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Lipase
Motif
Other DBs
NCBI-GeneID:
137184345
NCBI-ProteinID:
XP_067448021
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All DBs
Position
6:14220641..14230812
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AA seq
893 aa
AA seq
DB search
MMNSSKSNASSNSGRQDSNTDTNDEENAELCPGFKDADAFVKYGLGAVLSATRASAGLPQ
SGDEFDFYRSFPGFQEFCESQGDKLLHCMSQIMQHHGCRSHMRDRNKLTGLEERFDLVVD
SNDVILERVGILLDEADGVNRSQQPVMPAGFQPPKIVVSSWNRKGSSSGSRSETFRLLHA
KNVMRPQLKFKEKVDNSNTPFIPKIFIKPNAVKPLPSYFTNKQIRKERPEDLDVPAALAD
FIHQQRTQEHVEDMFAHPYQYELDHLTIAENLLSKPEPQMYKPITETKCAFIDTLEDLVA
LNEKLCKLSEFAVDLEHHSYRSFLGLTCLMQISTRDEDFIIDTLELRSEMYILNEAFTDP
AIVKVFHGADSDIEWLQRDFGLYVVNLFDTHQASRALNLARHSLDHLLKHYCSVDSDKRY
QLADWRIRPLPEEMVQYARTDTHYLLYIYDCVRAQLLDFNHGQPGLLQSVWNKSKDISLK
KYVKPIYTEESYLELQRKQKRSFNTQQLTAFRLLFAWRDKLARQEDESTGFVLPTHMMIK
ISEELPKEPQGIIACCNPVPPLVRQQVNELHLLVQEAREMPLLKAEIAAQKKKGLTPIKK
PEVTLFGPHDTSRVSESDLPHFSADELPVKQGALFSDDEHKMDVDEEKTSGLMAAAKITL
FEELETKNDQEDVSVAQMKARRIIESFENPFRMYLPSTDVHVNKNAKFDPSSKIFEISKR
WKLQSIEQQQKELESKKKAKEEAKEHAKKVAEERKKAKQSYQESLQNVATVRQQAAESAK
GDGKKRERAASEVGESTPKPSKKLMKSVEKPQKTEPPPQDSFKPFDYSQSDLKVFAGTKS
KDNTHFDPNRQTHDFKKKKTPKGQKSNFGAGNRSMSYMAGKSDRGFRHNWPKR
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattcttcaaagagtaacgcttcctccaacagtggccgtcaagacagtaataca
gacaccaacgacgaggaaaatgccgagctgtgtcccggttttaaagacgcggatgccttc
gttaaatatggactgggtgctgtattatcagccaccagagcatctgccggcttgcctcaa
agtggagatgaatttgatttctatcgaagcttcccgggcttccaggagttctgtgaaagt
cagggagataagctcctgcactgcatgagtcagataatgcagcaccacggctgcagatct
cacatgagagaccgcaacaagctgacagggttggaggagaggtttgacttggttgtggac
tcgaacgatgtcatcctcgaaagagtggggattcttcttgatgaagccgacggggtgaac
aggagccaacagcctgtcatgcctgcagggtttcagcctcccaagattgttgtttccagc
tggaatcgcaagggctcaagctctggcagtcgatctgagacgttcagactgcttcatgcg
aagaatgttatgaggcctcagctgaaattcaaggaaaaagtcgacaacagcaacacgccc
tttattcccaagatcttcatcaagcccaatgcagtaaagcctcttccttcttatttcacc
aacaaacaaatccgaaaagagagacccgaggatcttgatgtcccggctgccctggctgac
ttcattcaccagcagagaactcaggaacatgttgaagacatgtttgcacatccgtaccaa
tacgagttagatcatcttacaatagcagaaaaccttctgtctaaaccagaacctcagatg
tacaaaccaatcactgagacaaagtgcgctttcattgacacattggaggatctggtggct
ctgaatgagaagctgtgcaaactgtctgaatttgcagtggaccttgagcaccattcctac
aggagtttcctcggcctcacctgtctgatgcagatctccaccagagacgaggacttcatc
atcgacaccttggagctccgcagtgagatgtacatcctgaacgaagcgtttactgacccg
gctattgtcaaagtttttcacggtgcagactctgacatcgagtggctccagagggacttc
ggcttgtacgtcgtcaacctctttgacacacatcaggccagtcgagccctgaacctggcc
agacattccctcgaccacctgctaaaacactactgcagtgtggactcggacaaacgctac
cagctcgctgactggaggattcgccccttgccagaagagatggtgcaatacgcccggaca
gacacccactacctcctctacatctacgactgcgtgagagcgcagctgttggacttcaac
cacgggcagcctggcctgctgcagagtgtctggaacaagagcaaagacatttccctaaag
aaatatgtgaagcctatatacacagaggagtcctatttggagctgcagaggaagcagaaa
aggtcttttaacacccagcagctcactgccttcagactgctgtttgcctggagggacaag
ctggccaggcaggaagatgaaagcaccggatttgtcctgccaactcacatgatgatcaaa
atatccgaggagttgcccaaagagcctcagggcatcatcgcctgctgtaaccctgtgccc
ccgctggtgaggcagcaggtcaatgagctccatttgttagtacaggaagctcgagaaatg
cctctgcttaaggctgaaattgcagctcaaaagaagaaaggactcacgcccataaaaaag
ccagaggttactctgtttggtcctcatgatacatccagggtctctgaaagtgatcttccc
cacttttctgctgatgaactgcctgttaaacaaggggcgctcttctccgatgatgagcat
aaaatggatgtcgatgaagagaaaacaagtggtctcatggcagcagccaaaatcacactg
tttgaggagctggaaacaaagaatgaccaagaggacgtctctgtggctcagatgaaagcc
agacgcatcattgagtcttttgaaaaccctttcagaatgtatttaccatccactgatgtg
cacgtcaacaagaatgccaagtttgacccctcctcaaaaatatttgagatcagtaaaaga
tggaaactgcagagtattgaacagcagcagaaggagttggagtccaagaagaaagccaag
gaagaagcaaaggaacatgcgaagaaagtggcagaagaaagaaagaaggctaaacagagc
taccaggagtctctacagaacgtcgccaccgttcgtcagcaagcagcggaatctgcaaaa
ggcgacggaaagaagagagagagggccgccagcgaggttggagagtcgactcccaaaccg
agtaagaagctgatgaaatctgtagagaaacctcagaagacagagccgcctccccaagac
agcttcaagcccttcgactacagtcagtcagacctcaaagtttttgctggtactaaatcc
aaggacaacacgcattttgatccaaacaggcaaacccatgattttaagaaaaagaaaact
ccaaagggacaaaaatctaattttggagctggaaaccgaagtatgtcgtacatggctgga
aaatctgacagaggtttccggcataactggcccaaaagataa
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