Thunnus thynnus (Atlantic bluefin tuna): 137184437
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Entry
137184437 CDS
T11154
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137184437 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tty04040
]
137184437 (scn8aa)
Ion channels [BR:
tty04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
137184437 (scn8aa)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
FraC
HpsJ
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
137184437
NCBI-ProteinID:
XP_067448208
LinkDB
All DBs
Position
6:16135521..16181899
Genome browser
AA seq
1956 aa
AA seq
DB search
MAAPLIAPPGPDSFKKFTVESLGGLELRIKEEKNKKPPKQDSSYRDDDDENKPKPNSDLE
AGKSLPYIYGDPPSGMVAVPLEDLDPYYLNTQKTFIVLNKGKTIFRFSATPALYFISPFN
PVRRVAIKILIHSLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKITA
RGFCIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKT
IVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPINTTESYLANGSKG
FDWDEYIMNDTNFYFLPGQADALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGWA
FLALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQ
ATMEEAAQKEEEFKAMLEQLKKQQEDAQTAAMATSAGTVSEDAVEDDGGGRLSCSSSEMS
KLSSKSAKERRNRKKKWRQKEQEKEKGDSEKFVKSESDDGSKRSRFRFPDNRLGRKSSIM
NQSLLSIPGSPFLSRHNSKSSIFSFKGRSKDVGSENEFADDEHSTVEECEERRGSLFSPY
RRNSYSGFHGKRNSTVDCNGVVSLIGPGPGGRLLPEPTTEVEVKKKLSGSLMVSVDQLNT
SFGRKERANSVMSVITNTLVEELEESQRKCPPCWYKFANTFLIWECSPKWVKIKEIVNLI
VMDPFVDLAITICIVLNTLFMAMEHYPMTNDFEDMLSVGNLVFTGIFAGEMLFKLVAMDP
YYYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIG
NSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAADCELPRWHMNDFFHSFLIV
FRVLCGEWIETMWDCMEVAGQGMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATD
DDGEPNNLQISVMRIKKGVAWIKVKMRILVASLLKKPPMEDEQKPLDDMYDKKLNCIANH
TGVDINRDLDYAKNGNGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVPIAVGESDFENL
NTEDFSSESDNENSKELDETSSSEGSTIDIKPDVEEVVVVEPVEEYMEPEPCWTDACVAK
YKCCDVDITMGWGKSWWFLRKTCYLIVEHNWFETLIIFMILLSSGALAFEDVYIEQRKTV
RIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSLVANALGYSD
LGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNL
FAGKYYYCFNETSEEYFPVDVVNNKTQCEALMHQNFTEVRWKNVKINFDNVGAGYLALLQ
VATFKGWMDIMYAAVDSREVEDQPDYEVNIYMYIYFVVFIIFGSFFTLNLFIGVIIDNFN
QQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVFDFVTQQVFDISI
MILICLNMVTMMVETDDQSDETEHVLYWVNFIFIVVFTMEFLLKLFALRHYYFTNGWNIF
DVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL
PALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDLYNFETFGNSMIILFMITTSAGWD
GLLLPILNYPPDCNPNFENPGTSVKGDCGNPSVGIFFFVMYIIISFLIVVNMYIAIILEN
FSVATEESADPLSEDDFETFYEIWEKFDPTASQFITFAKLSDFADALEHPLRVPKPNTIE
LIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRQQMEERFVAANPSKVSYEPITT
TLRRKQEDVSARTIQNAYRAHLIRRGIIFKRHTFTNNKLENGGTNQEKKESTPSTASLPS
YDSVTKPDKEKQDENKEEWARKEKDKNQKDEWESKC
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttattgcaccgccaggacctgatagcttcaagaagtttactgtggaa
tctttggggggccttgagctgcgcatcaaagaggagaagaacaagaagccacccaagcag
gacagcagctaccgtgatgacgatgacgagaacaaacccaagcccaacagcgacctggag
gctgggaagagtctgccctacatatacggggaccccccttctggaatggtggcggtacca
ctggaggacctggacccatactacctgaatactcagaaaacatttatagtgctaaataaa
gggaagacaatcttccgttttagtgccacacctgccttgtacttcataagtccttttaat
ccggttaggcgagtagctattaaaattttgatacattctcttttcagcatgatcattatg
tgtactattttgaccaactgtatattcatgacctttagtgatcctcctgagtggtcaaaa
caagtagagtacacgttcacaggaatttatacatttgagtctcttgtaaaaatcaccgca
cgaggattctgtatagacgggtttacattccttagagatccatggaactggctggatttc
atggtcatttcgatggcatatataacagagtttgtggacctgggcaatgtatctgcgctg
agaacattcagagttctccgagcattgaaaactatctctgtcattccaggcctgaagacc
attgtgggtgccctgatccagtctgtgaagaagctttcagatgtgatgatcctgaccgtc
ttctgcctgagcgtctttgccctcatcggtctccagctcttcatgggcaacctgcgccac
aagtgtgtgatctggccaatcaacaccaccgagagctacctggccaacggcagcaagggc
tttgactgggacgagtacatcatgaacgacaccaatttctatttcctgcctggccaggcg
gatgctcttctctgtgggaacagctcagactctggccgctgcccggagggttacacatgc
atgaaagctgggaggaatccaaactacggctacaccagctttgacagcttcggctgggcc
ttcctggctctcttccgactcatgacacaggacttctgggagaacctctacatgctgacc
ctgagggcggcagggaagacctacatgatctttttcgtgttggtgatctttgtgggttca
ttctacttggtgaatctgatcctggctgtggtggccatggcctatgaggagcagaatcag
gccaccatggaggaggccgcacagaaggaggaggaatttaaggccatgctggagcagctc
aagaaacagcaggaagacgctcagaccgctgctatggcaacctctgcgggcacagtgtca
gaggacgcggtagaggacgatggaggagggcgcctgtcatgcagttcctctgagatgtcg
aagctaagctctaagagtgccaaagagcggcgcaaccgtaagaagaagtggcggcagaaa
gagcaggagaaggagaaaggagacagcgagaagtttgtcaagtcagagtcggatgacggc
agcaagaggagccgcttccgtttccctgataaccggttgggtcgaaagtcttccattatg
aaccagtctctcctcagtatacccggctcgcctttcctgtcccgccacaacagcaagagc
agcatcttcagtttcaagggccgcagtaaggacgtgggctcggagaacgaattcgcagat
gacgaacacagcacggtggaggagtgcgaggagcgtcggggctccctgttcagcccgtac
cggaggaacagctacagtggtttccacgggaagaggaacagcacggtggattgcaacggc
gtggtgtcgctcatcggccctgggcctggtggacgccttctgcctgagccaactactgag
gttgaggtgaagaagaagctgtcgggctccctgatggtgtctgtggaccagctcaatacc
tcctttgggcggaaagagcgggccaacagtgtcatgagcgtcattaccaacacactagtg
gaggaactggaggagtctcagcgcaagtgtccgccatgctggtataagtttgctaacaca
ttcctgatctgggagtgctcccccaagtgggtgaagattaaggagattgtgaacctgata
gtcatggaccccttcgtggacttagccatcaccatctgtatcgtcctcaacaccctcttc
atggccatggagcactaccccatgaccaacgactttgaggacatgctgtctgtaggcaat
ctggtgttcacggggatctttgcaggggagatgcttttcaaactggtggctatggatccc
tactactactttcaggaggcctggaactgtttcgatggtttcattgtgacgctgagttta
gtggagctggctctagctgacgtcgagggcctgtctgtgctgcggtcattccgattgctg
agagtgtttaagctggccaagtcatggcctaccctcaacatgctgatcaagatcatcggt
aactcagtgggagccttggggaacttgactctggtgctggccatcatcgtcttcatcttt
gctgtggtgggcatgcagctgtttggcaagagctacaaagactgcgtgtgtaagatcgct
gctgactgtgagctgccccgctggcacatgaacgacttcttccattccttcctgatcgtc
ttccgggtgctatgcggtgagtggattgagaccatgtgggactgcatggaggtggcgggc
cagggcatgtgcctcatcgtcttcatgatggtcatggtcatcggtaacctggtggtgttg
aacctgtttcttgccttgctgctgagctcattcagtgctgacaacttggctgcgacagat
gacgacggtgagcccaacaacctacagatttctgtcatgcgtataaagaaaggcgttgcg
tggataaaagtgaagatgcggatacttgtggccagtctgctgaagaaaccaccgatggag
gatgagcagaagcctttggatgacatgtatgacaagaagctgaactgcattgctaaccac
accggggtggacatcaaccgtgacctggactatgccaagaatggtaacggcaccaccagc
ggtattggcagcagtgtgggcaagtatatgattgatgaggaccacatgtcgttcattcac
aacccaaacctgaccgtctgcgtgccaatagctgtgggagagtctgactttgagaacctc
aacacggaagacttcagcagcgagtcggacaatgagaacagcaaagagctggatgaaacc
agttcatcagagggcagcaccatcgacatcaagccagatgtggaggaggtggtggtggtg
gaaccggtggaggaatacatggagccagagccgtgttggacagatgcttgtgtggccaag
tacaagtgctgtgacgttgacatcactatgggctgggggaagagctggtggttcctgaga
aaaacctgctacctgattgtggagcacaactggtttgaaaccctcatcatcttcatgatc
ctcctcagtagcggtgccctggcctttgaggatgtgtacatcgagcaaaggaagacggtt
cggatcattttggagtatgctgacagggttttcacctacatcttcatcctggagatgttg
ctgaaatgggtcgcctatggttttgtcaagtacttcacgaatgcctggtgttggctggac
ttcttcattgtggatgtgtctatagtcagccttgtagctaatgcgctgggctactccgat
ctagggcccattaaatcactcaggacactaagggccttgagacccctcagagccttgtca
cgttttgaagggatgagggtggtagtcaacgccttggtgggtgccatcccttccattatg
aatgtgttgctggtttgcctcatcttttggctgattttcagtatcatgggggtcaacttg
tttgcgggcaagtactactactgtttcaatgagacatcagaggaatactttcccgtcgac
gtggtcaacaacaagacccagtgtgaggccctcatgcatcaaaactttaccgaggtcagg
tggaagaacgtcaagatcaactttgacaatgtgggcgccggctacctggctttactgcaa
gtggccacattcaaaggctggatggacattatgtatgcagctgtggattccagagaggtg
gaagaccagcccgactatgaagtcaacatctacatgtacatctactttgttgttttcatc
atatttggctccttcttcaccctcaacctcttcattggtgtgatcattgataacttcaac
cagcagaagaaaaagtttggaggtcaagatatcttcatgacagaggaacagaagaagtac
tacaatgccatgaaaaaactggggtccaaaaagccgcaaaaacctattcctcgaccacag
aacaagatccagggaatggtgttcgactttgtaacacagcaagtcttcgacatctccatc
atgattctcatctgcctcaacatggtcaccatgatggtggaaacagacgatcagtcggat
gaaacagagcacgtcctctactgggtcaacttcatctttattgtagtcttcaccatggag
ttcttgctgaagctttttgcccttcgtcactattacttcaccaatggctggaatatcttc
gacgttgtggtggtcatcctgtcaattgttggtatgttcctggctgaccttattgagaag
tactttgtatcgccaaccctgtttagggtgatcaggttggctcgtattggccgtatcctc
cgtctgatcaaaggagctaagggcatccggactttactctttgctctgatgatgtcactg
ccagccctcttcaacattggcctcctgctcttcctggtcatgttcatcttctccatcttc
ggcatgtctaattttggctatgtaaaacacggagcaggcattgacgacctgtacaacttt
gagacctttggtaacagcatgatcatcctgttcatgatcaccacgtcggctggctgggac
ggcttgctgctgccaatcctcaactacccaccagactgtaatcccaacttcgaaaaccca
ggcacctccgtgaagggcgactgcggtaacccctcggtgggaatcttcttttttgtcatg
tatatcatcatttctttcctgattgtggtcaacatgtacattgccatcattctggagaac
ttcagtgtggccacagaggaaagtgctgatccacttagtgaggacgactttgagaccttc
tacgagatctgggagaagtttgaccctactgcctctcagttcatcacttttgccaagctg
tctgactttgccgacgctttggagcacccacttcgtgtgccaaagcccaacactatagaa
ctaattgccatggacatgcccatggtgagcggcgatcgcattcactgcctggacatcctg
tttgccttcacaaagcgtgtgctgggtgacagtggtgagttggacatgctgaggcagcag
atggaggagcgttttgtggcggccaacccctctaaggtgtcgtatgaacccatcaccacc
accctccgccgcaaacaggaagatgtctccgccagaactatccagaacgcctaccgtgct
cacctcatcaggcgtggcatcatcttcaagcgtcacactttcactaacaataagcttgag
aacggagggaccaaccaagagaagaaggagagcacaccatccactgcctctctcccctct
tatgacagcgtgaccaaacctgacaaggagaagcaggacgaaaacaaagaggagtgggcc
aggaaagagaaggacaaaaaccaaaaagatgagtgggaatccaagtgttag
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