Thunnus thynnus (Atlantic bluefin tuna): 137185082
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Entry
137185082 CDS
T11154
Symbol
sox18
Name
(RefSeq) transcription factor Sox-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tty03000
]
137185082 (sox18)
Transcription factors [BR:
tty03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
137185082 (sox18)
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GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
137185082
NCBI-ProteinID:
XP_067449416
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Position
6:complement(30085915..30095129)
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AA seq
598 aa
AA seq
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MNLTEPSLLHPSRVSLRGPWASGTPSPASDSEMGFEQSLSGDCSSPDGLGTGNMRRAEPR
ISLTPSSGGQSPDLTQAGGMGTADGKAVGGEQRIRRPMNAFMVWAKDERKRLALQNPDLH
NAVLSKMLGQSWKALNATDKRPFVEEAERLRVQHLQDHPNYKYRPRRKKTTKKLKRVEPG
LLLHSLAQGGAPGLGLGPGISPLGAESISGGSAYGHPGGHPPHHHHSHHLLPSLGHFRDL
QAPGHQELESYGLPTPEMSPLDVLDDGAGESVFFPQHMQEEAGMGGWSGYHHHLHHHNPH
YSHHYNNHSHHNSMHAAATHSQGSGMSVGASISSGMTSSLSPGRSSRIDSRMTSVESNMT
SSMSSVTSVLASSVNSRLNPTHAASHHIALRNPVKCPPPLPDSSSSVSYHQSSISLPETI
KSHQTPLSTVPVSYFTQMYGSSAPNATHFTPSHLGQLSPPPETSPSACSSSSIPPSFLPP
VHLDPSNPESSGHLGSSSSVEFWSEVDRHEFDQYVNVGRNREEPYGLGGGCGGGSKVLVG
RSSNSVGGSINSSASSIINRDVSSIMSGAGGCDEGISPLISALSDASSAVYYSACITG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaactgagcccagtcttttacatcccagtcgggtgtccctcaggggcccctgg
gcatctgggaccccgagtcctgcttctgattccgaaatgggttttgagcagagcctctct
ggagactgcagttctcccgatggccttggaactggaaacatgaggagagcagaaccgagg
atttctctgacacccagttcagggggacagagtccggacctgacccaggcaggaggcatg
ggcacagctgatgggaaggccgtggggggcgagcagaggatccgcaggcccatgaatgcc
ttcatggtctgggctaaagatgagaggaagcgactggccctgcagaaccccgacctgcac
aatgctgttctcagcaagatgctcggtcagtcatggaaggccctaaatgctacagataag
cgcccatttgtggaggaggcagaacgtctccgtgtccagcacctccaggatcacccaaac
tacaagtaccggcctcgccgcaaaaagaccaccaaaaaacttaagcgggttgagccgggg
ctcctgcttcacagcttagcccagggtggggcaccaggccttgggttagggcctggcatc
agccccttgggtgcagaaagcatctctggaggctctgcctatggacatccaggcggccac
cctccacaccaccaccactcccaccacctgctgccatctctggggcacttcagggacctc
caggccccaggacaccaagagctagagagctatggcctgccaactccagagatgtccccc
ttggatgttctggacgatggagctggagagtctgtgttcttcccccaacatatgcaagag
gaggcagggatgggaggttggagtgggtaccaccaccaccttcaccatcataacccgcat
tacagccatcactacaacaaccacagtcaccataactccatgcatgctgcagcaacacac
agtcagggttcaggaatgagtgttggagccagtataagctctggcatgacttccagttta
agtccaggtagaagttccagaattgattctagaatgacttcagttgagtcaaatatgacc
tcgagcatgagctctgtcacctcagtgttggcgagttcagtcaactctaggttaaatcct
actcatgctgccagtcaccacattgccttgaggaatcctgtcaagtgcccacctcctctc
cctgactcctcctcttctgtttcctaccaccagtcctccatcagcctcccagagacgata
aaatcccatcaaactcccctgagcactgttcctgtcagctacttcacccaaatgtatggg
agcagtgccccaaatgctacccatttcactccttctcacctggggcagctttcacctcct
cctgaaacatctccttctgcttgctcatcctcctccatccccccatcattcctcccccct
gtgcacttagacccttcaaatccagagtcctccggccatttggggtcttcttcctctgtt
gagttttggtccgaggtggacaggcatgaatttgaccagtatgtaaatgttggaaggaat
cgagaggagccctatggacttggtggaggttgtgggggtgggtccaaagtcctggttggg
cgcagtagcaatagtgttggcggtagcattaatagcagtgctagcagtatcattaacagg
gatgtcagtagcattatgagtggtgctggtgggtgtgatgaaggaatcagccctcttata
tctgctctttctgatgccagcagtgctgtctattacagtgcctgtatcactggataa
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