Thunnus thynnus (Atlantic bluefin tuna): 137185857
Help
Entry
137185857 CDS
T11154
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04142
Lysosome biogenesis
tty04144
Endocytosis
tty05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137185857
04142 Lysosome biogenesis
137185857
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
137185857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137185857
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tty04147
]
137185857
Membrane trafficking [BR:
tty04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
137185857
Exosome [BR:
tty04147
]
Exosomal proteins
Proteins found in most exosomes
137185857
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Ig_TRAPPC10_3rd
Motif
Other DBs
NCBI-GeneID:
137185857
NCBI-ProteinID:
XP_067450397
LinkDB
All DBs
Position
7:11415443..11445724
Genome browser
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEDNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQRSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKNPELWASVL
LETNNYRRPLIDQVVQTALTETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VEGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPSDAWKEGQFKDIVTKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYAALRTSIDAYDNFDNISLAQGLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLNE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDKL
EASESLRKQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQAYGYGYTAAPGYAQPPQPSF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactacctatccgcttccaggagcacctgcagctccagaacctggggatc
aacccagccaacatcggattcagcactctaaccatggagtccgacaagttcatctgtata
agggagaaggtgggtgagcaggcccaggttgtcatcattgatatggcggaccccaacaat
cccatccgcaggcccatctctgcagacagcgccatcatgaatcctgccagcaaagttatt
gcccttaaagcggcaaagaccctgcagatcttcaacattgagatgaagagcaagatgaag
gctcacacaatgacagatgacgtgaccttctggaagtggatctccctcaacaccgttgcc
ctggtcacagacaacgcagtctaccactggagcatggagggtgactctcagccaatcaaa
gtctttgaccgccactccagcctggcaggctgccagatcatcaactaccgcactgacgcc
aaacagaaatggttgctgctcatcggcatttcagcacagcaaaaccgtgttgttggagcg
atgcagctatactcagtggacaggaaggtgtctcagcccatcgagggtcatgctgctggc
tttgcgcagttcaagatggaggacaataccgaagagtcaactctgttctgctttgctgtg
cgaggacaggcagggggaaagctgcatatcattgaagtggggactccaccgactgggaac
cagccatttccaaagaaagctgtggatgttttctttcctccagaagcccagaatgacttc
cccgtcgccatgcagatcagttccaagcaagatgtagtctttctcatcaccaaatatggc
tacatccacctgtatgacctagagactggaacctgtatctacatgaacaggatcagcggg
gagaccatttttgtcactgcccctcacgagcccactgctggtatcattggggtcaacagg
aaaggacaggtgttgtcagtgtgcgtggaggaggaaaacatcattccctacatcaccaat
gtgctccagaacccagacctggctctccgcatggctgtccgtaacaaccttgccggtgct
gaggagctgtttgcccgcaagttcaacaccctctttgcagcagggaattactcagaagct
gccaaggtggcagccaatgcacctaagggtatcctgcggaccccagacaccatccgtagg
ttccagagcgttccagcccaaccaggccagaggtctccattgctccagtactttggcatc
ttattggatcaaggccaacttaacaagtttgagtctctggaactgtgcaggcctgtcttg
cagcaaggccgtaagcagttgctagagaaatggctgaaagaggacaagctggaatgctct
gaggagcttggagacttggtgaaatctgtagatcctactcttgccctcagtgtctacctc
agagctaacgtccccaataaggtcattcagtgctttgcagagactggccagttccagaag
attgttctctacgccaagaaggtgggatacactccagactggatcttcctgctaaggaac
gtaatgcggatcagcccagaacagggccttcagttttcccagatgttggtacaggatgag
gagccacttgctgacattacacagattgtcgacgtcttcatggagtacaacctgatccag
cagtgcacatccttcctgctagatgctctgaagaacaacagacccatggagggaccactt
cagacacgtctgctggaaatgaatttggtccatgcaccacaggttgcagacgccatcctg
ggcaaccagatgttcacccattatgatcgtgcccatgtggcacagctgtgtgagaaggct
ggtctcctgcagagggcgctggagcattacaccgacttatatgacattaagcgtgctgtg
gtgcacacacacctcctcaacccagagtggctggtgaatttctttggctccttgtcagtg
gaggactctttggagtgtcttagggccatgctgtctgctaacatccgccagaacctgcag
atctgtgtccaggtcgcctccaagtaccatgagcaactctccactcagtccctcaccgaa
ctctttgagtccttcaaaagctttgagggtttgttttatttcctgggttccattgtgaac
ttcagccaggaccccgaggttcacttcaaatatattcaagctgcttgcaagacgggccag
atcaaagaggtggagagaatctgcagagagagtaactgttacgaccctgagcgtgtcaag
aacttcctcaaggaagctaagctgactgaccagctgcctttgatcattgtgtgtgaccgc
ttcgattttgtccatgatctggtcctgtacctgtaccgcaacagcctgcagaaatacatt
gagatctatgtgcaaaaggtgaacccaagccgtctgccagtagtcatcggaggtttactg
gatgtggattgtgctgaggatgtgattaagaacctgatcatggtggtgagagggcagttt
tccacagacgaactggtcgctgaagtggagaaaagaaatcgactgaagctgctgctgcct
tggttggaggctcgtattcatgaaggttgtgaggaacctgcaacccacaacgccctggcc
aagatttacatcgacagcaacaacaacccagaacgtttcctgagggagaaccccttctac
gacagccgtgtggtgggcaagtactgtgagaagagagacccccacctggcctgtgtggcc
tacgaaagaggacagtgtgaccaggagctaattaatgtgtgcaatgagaactcactgttt
aagagtctgtcccgctaccttgtgcgtcgcaagaatcctgagctgtgggcaagcgtgctg
ctggagaccaacaactacagaagaccacttatcgaccaggttgtccaaacagccctgaca
gagacacaggatccagaggaggtatctgtgacagtcaaggcctttatgaccgctgacctt
cctaatgagctcatcgagcttctggagaagattgtcctggataactctgtctttagcgag
cacagaaacctgcagaatctgctcatcctgacggccattaaagctgatcggacacgtgtc
atggagtacattaaccgtctggacaactacgatgccccagacattgcaaatattgccatc
agcaatgagctgtttgaggaggcctttgctatttttaggaaatttgacgtcaacacctct
gctgtgcaggttctgattgagcacattggtaatttggacagagcctatgagtttgctgag
cgctgcaatgagcctccagtgtggagtcagctggcaaaggcccagctgcagaaaggtctg
gtcaaagaagccattgactcttacatcaaggctgatgacccctctgcttacatggaggtg
gggcaagctgcagcccagagcggaaactgggaggacctggtgaagtttctgcagatggcc
cgtaagaaggcccgtgagtcgtacgttgaaacagagttaatcttcgctctggccaagacc
aaccgcctggctgagctggaagagttcatcaatggcccgaacaatgctcacattcagcaa
gtgggtgaccgttgctatgacgacaagatgtatgaggcagccaaactgctttacaacaat
gtgtccaatttcggccgcctggcatccactctagtgcacctgggagaataccaggcagct
gtggatggagctcgcaaggccaacagcacccgcacctggaaggaggtgtgttttgcttgt
gtagaggggaaggagttccggctcgcccagatgtgcggcctgcatattgtcgtacatgcc
gatgaactggaggaacttatcaattactaccaggatcgtggttactttgaggagctgatc
accatgctggaggcggccctgggactggagcgtgctcacatgggtatgttcacagagctc
gccatcctctactccaaattcaaaccccagaagatgagggagcacctggagctcttctgg
tcccgtgtcaacattccaaaggttctcagggcagcagagcaagcccacctctgggcagag
ctggtgttcctttacgacaagtatgaggaatatgacaacgccatcatcactatgatgaac
cacccatctgatgcctggaaggagggccagttcaaagacattgtcaccaaggtggccaac
gtggagctgtactacaaggcggtccagttttatctggagttcaaacctttgttactgaac
gacctgctcatcgtcctctctccaagactggaccacacacgcgccgtcaatttcttcagc
aaggtcaaacagctgcctctggttaaaccatacctgaggtcggtccagaatcacaacaac
aagtcagtcaatgaagccctcaacaacctcttcatcattgaggaagactacgcggcactg
cgcacctccattgatgcctacgacaactttgacaacatctcactggcccagggcttggag
aagcatgagttgattgagtttaggaggattgcagcgtaccttttcaagggcaacaaccgc
tggaaacagagtgttgagctctgcaagaaggacaagctctacaaggatgccatgcagtac
gcatcagagtccaaagacacagagctggctgaagagctcctggcttggttcctgaatgaa
gacaagaaggagtgttttgccgcctgcctattcacctgctacgacctgctgcggcccgac
gtggtgcttgagaccgcttggaggcacaacatcatggacttctccatgccatatttcatc
caggtcatgagggagtacctcagtaaggttgatgcgataaaggaaaaggtggacaaactt
gaagcctccgagtccctgaggaaacaggaggagcaggctacagagtctcaacccattgtt
tacggcacaccccagctcatgctcacagcagggcccaacgtggccgtgcctcctcagcag
gcctacggctacggttacacagcagcaccaggctacgcccagccgccacagcccagcttc
ggttacggcatgtga
DBGET
integrated database retrieval system
