Thunnus thynnus (Atlantic bluefin tuna): 137186031
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Entry
137186031 CDS
T11154
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137186031 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tty03041
]
137186031 (prpf8)
Spliceosome [BR:
tty03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
137186031 (prpf8)
Complex C
U5 SnRNP specific factors
137186031 (prpf8)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
137186031
NCBI-ProteinID:
XP_067450740
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All DBs
Position
7:complement(17446031..17465168)
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AA seq
2338 aa
AA seq
DB search
MAATFPYRGVPAGIPPGVPPPAPVPDFMSEEKLQEKARKWQQLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDPEEDGSVVEWFYEHQPLKDTAKFVNGTTYRRWQFTLPMMST
LYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEYVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGR
TRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDT
ATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTV
HLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCS
FTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQV
SWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMFG
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaccttcccctacagaggagtccctgcagggatcccaccaggtgtaccccct
cctgcaccggtcccagacttcatgtctgaggaaaaactgcaagagaaagcaaggaaatgg
cagcagttgcaggcaaagcgctactcagaaaagaggaagtttggctttgtggatgctcag
aaggaagacatgccacctgagcatgtccgcaagatcatcagggaccatggagacatgacc
aatagaaagtttcgtcatgacaagagggtctacctcggtgccctcaaatacatgccccat
gcagtgttgaaactgctggagaacatgcctatgccctgggaacagatccgagatgtgccc
gtcctgtaccacatcacaggagccatttccttcgtcaatgaaatcccatgggttattgag
ccggtctacatcgcccagtggggcaccatgtggatcatgatgcgtcgtgagaaacgtgac
cgtcgacacttcaaaaggatgcgctttccaccgtttgatgatgaggagccgccactggac
tacgctgacaacatccttgatgtggaaccactggaggccattcagatggagctggacccc
gaggaggacggctcagttgtagagtggttctatgaacaccagcccctcaaagacactgcc
aagtttgtgaatggcaccacctaccgtcgctggcagttcacattgcccatgatgtccaca
ctgtaccgcctggccaaccagctgttgacggacctggtggatttcaactacttttatctg
tttgacctcaaggctttcttcacttccaaggccttaaatatggccatccctggaggacca
aagtttgagcccctggtccgggacattaacctccaggatgaagactggaacgagttcaat
gatatcaacaagatcatcatcagacagcctatcaggacggagtacaaaatcgcattcccc
tacctgtacaacaacttgccgcaccacgtccacctcacctggtatcacacaccaaatgtg
gtgtttatcaagacagaggatccagatcttccagcgttctactttgacccgctgatcaac
cccatttcacacagacactctgtcaagagtcaagagcccctgcctgatgacgatgaagag
tttgagcttcctgagtacgtggaacccttcctcaaggagacgccactctacacagacaac
accgccaacggcattgctctgctgtgggcgccgagacccttcaacctccgctccggccgc
acgaggagagccattgatatccccctgatcaagaactggtaccgtgagcactgccctgcc
ggacagccagtgaaggtgcgtgtgtcataccagaaactgctcaagtactatgtgctcaac
gctctcaaacacagaccaccaaaggcccagaagaagaggtatctgttccgctccttcaag
gccaccaagttctttcagtccaccaagctggactgggtggaggtgggcctgcaggtttgc
agacagggctacaacatgctcaatctgcttatccaccgtaagaacctgaactacctgcat
ctcgactacaacttcaacctgaagcccgtcaagacactgaccaccaaggagcgtaaaaag
tcccgtttcggcaatgccttccacttgtgcagagaggtgctgcgtctcagcaagctggtg
gtggacagccacgtgcagtacagactgggaaatgttgatgccttccagttggctgacggg
ctgcagtacatcttcgctcatgtggggcagctgacaggcatgtaccgctacaagtacaag
ttgatgagacaaatccggatgtgcaaagatctgaagcatctcatctactaccggttcaac
actggtcctgtgggcaagggtccaggatgtggtttctgggcacctggctggagagtgtgg
ctgttcttcatgaggggcatcactccactgttggagaggtggctgggaaatctgctggcc
aggcagtttgaaggacgtcactccaagggagtggccaagacggtgaccaaacagcgtgtg
gagtctcactttgatctggagctgcgtgcagctgtgatgcatgacattttggacatgatg
cctgaaggcatcaaacagaacaaagccagaaccatcctgcagcatctcagtgagtcctgg
aggtgctggaaggccaacatcccctggaaggtgccaggcctgcccactcccattgagaac
atgatcctgcgctacgtgaaggccaaagctgactggtggaccaacacggcccactacaac
cgtgagcgaatccgtcgtggagccactgtggacaagactgtctgcaagaagaacctggga
agattgacccgtctgtacctgaaagctgagcaggagagacagcacaactacctgaaggac
ggcccatacatcacagctgaagaggcagtagccatttacaccaccactgttcactggctg
gagagtcggcggttctcccccatccccttccctccactgtcctacaaacatgacaccaag
ctgctcatcctggccctggagagactcaaggaggcgtacagtgtgaaatcccgtctgaac
cagtctcagagggaagagcttgggctgatagagcaggcttacgacaatcctcacgaggct
ctgtccaggatcaaacgtcacctgctcactcagagagctttcaaagaggtgggtattgag
ttcatggacttgtacagccatctggtgccggtgtacgacgtagagcccctggagaagatc
actgatgcctaccttgaccagtacctttggtatgaggcagacaagaggcgactgttcccg
ccctggatcaaaccagctgacactgaaccaccaccactgctggtctacaagtggtgccaa
ggtatcaacaacttgcaggacgtgtgggagactgcggagggagagtgtaacgtgatgctg
gagtcccgctacgagaagatgtatgagaagattgatctgacgttgctcaacaggctgctg
cgtcttattgtcgaccacaacattgctgattacatgacggctaagaacaacgtggtcatc
aactacaaggacatgaaccacacaaactcgtacggcatcatcagggggctgcagtttgcc
tcattcattgtacagtactatggcctggtgatggacctgctggtgctgggcctgcaccgt
gccagtgagatggccgggccaccccagatgccaaacgacttcctcagcttccaagacaca
gccacagagagcgcccacccaatccggctgtactgccgctacatcgaccgcatccacatc
ttcttcaggttctctgctgacgaggccagggacctcattcagaggtatctaacggagcac
ccagaccccaacaatgagaacattgtgggttacaacaacaagaagtgctggcctcgcgat
gcccgcatgagactgatgaagcacgatgtcaaccttggacgtgcagtcttctgggacatc
aagaaccgcctgccgagatcagtgaccacagtccagtgggagaacagctttgtgtcggtc
tacagcaaagacaaccccaacctactcttcaacatgtgtggcttcgagtgccgcatcctg
cccaaatgtcgcaccagctatgaggagttcactcacaaggacggtgtctggaacctgcag
aatgaggtaaccaaagagaggacagcgcagtgtttcctgcgtgtggacgatgaatcaatg
cagcgcttccacaaccgagtgcgtcagatcctgatggcctccggatccaccacattcacc
aagattgtgaacaaatggaacacggctctcatcggcctgatgacgtacttccgtgaagca
gtggtcaacactcaagagctcctggatctgctggtcaagtgtgagaacaagatccagaca
cgtatcaagatcggccttaactccaaaatgcccagtcgcttccctcctgtagtcttctac
actcccaaagagttgggcggccttggcatgttgtctatgggccacgtgctgattccacag
tcagacctgcggtggtccaagcagacagatgtgggcatcacccacttcaggtctggaatg
agccatgaagaggaccaactgattcctaatctgtatcgttacattcagccatgggagagt
gagttcatcgactcccagagggtctgggctgagtatgccctcaagagacaggaggccatt
gctcagaacagacgtctgactttggaggatttggaggactcgtgggacagaggaatcccg
cgtatcaacacacttttccagaaggacagacacacattggcctatgacaaaggctggaga
gtcaggacagatttcaaacagtaccaggtgctgaagcagaatccgttctggtggacccac
cagaggcacgatggcaaactgtggaacctgaacaactaccgcacagacatgatccaggct
ctgggtggtgtggagggcatcctggagcacacactcttcaaaggcacttatttccctacc
tgggagggtctcttctgggagaaggccagtggctttgaggagtccatgaagtggaagaag
ctgaccaatgcccagaggtccggtctcaaccaaatccccaaccgtcgcttcacactttgg
tggtcacccaccatcaacagagccaacgtgtatgtgggtttccaggtgcaacttgacctg
acgggaatcttcatgcacggaaagatccccacactgaagatctccctcattcagatcttc
agggctcacttgtggcagaagattcatgagagcattgtcatggatctctgtcaggtgttt
gaccaggagctggatgctctggagattgagactgtgcagaaggagaccatccaccccagg
aagtcatacaagatgaactcgtcctgtgctgacatcctcctctttgcatcatacaagtgg
aacgtctctagaccgtctctgctcgccgactccaaggatgtgatggacagcaccaccaca
cagaagtactggattgacattcagctgcgttggggtgactatgactcacatgatatcgag
cgctacgccagggccaagttcctggactacaccaccgacaacatgagtatctacccctcc
cccacaggggtgctcattgctattgacctggcttacaacctccacagtgcttatggtaac
tggttccctggaagcaaacctctgatccagcaggccatggccaagatcatgaaggccaac
cctgccctgtatgtgctcagggagcgcatccgcaagggtctgcagctgtactcttcagag
cccactgagccgtacctgtcctcacagaactatggtgaactcttctccaaccagatcatc
tggttcgtagatgacaccaacgtctacagagtcaccatccacaagacctttgagggtaac
ttgaccacgaagcccatcaatggagccattttcatcttcaaccccaggactggccagctc
ttcctcaagatcattcacacctctgtgtgggctggacagaaacgtctgggacagctggcc
aaatggaaaacagctgaagaagtagctgccctgatccgctccctgcctgttgaagagcaa
ccgaaacagatcattgtaaccagaaagggcatgctggaccctctggaggtccacttgctc
gacttccccaacattgtgatcaagggctcagagttgcagctgcccttccaggcctgtctg
aaggtggagaagtttggagacctcatcctgaaagctacagagcctcagatggtgctgttc
aacctgtatgatgactggcttaagaccatctcgtcttacacagccttctcccgactcatc
ctgatcctcagagcgctccatgtcaacaatgaccgtgccaaggtgatcctgaaacctgac
aagacaactatcactgagccccatcacatttggcccactctcactgacgaggagtggatc
aaggtggaagtgcaactcaaagatctcatccttgctgactatggcaaaaagaacaatgtg
aacgtggcctcgctgacccagtcggagatccgtgacatcatcctgggtatggagatctca
gctccgtcacagcagcgccagcaaattgctgaaattgagaagcagaccaaggagcagtcg
cagctcaccgccacacagacccgcactgtgaacaagcacggtgacgagatcatcacctcc
accacctcaaactacgagactcagaccttctcctccaagactgagtggagggtcagggcc
atatctgctgccaacctccatctccgtaccaaccacatctacgtgtcatctgatgacatc
aaggagacaggctacacctacatcctgcccaagaacgtcctcaagaagttcatctgcatc
tcagatctgcgagcacagattgcaggatacctgtacggcaccagtccaccagacaacccc
caagtgaaggagatccgatgtatcgtcatggtgccacagtgggggacgcaccagaccgtc
cacctgcccaaccagctgcctggacatgaatacctcaaagagatggagcccctcggctgg
atccacacccagcctaatgagtcaccgcagctgtcccctcaggatgtcaccacccatgcc
aagattatggctgacaacccctcttgggatggagagaagaccatcatcatcacttgcagc
ttcacaccaggctcttgcacgctcacagcctacaagctgacacccagcggctacgagtgg
ggtcgacagaacacagacaagggcaacaaccctaaaggttacctgccatcccactatgag
agagtgcagatgctgctctctgaccgcttcctgggcttcttcatggttcccggtcaagtc
tcctggaactacaacttcatgggtgtgcgccacgaccccaacatgaagtacgacctgcag
ctggccaaccccaaggagttctaccatgaagtccaccggccctcgcacttcttaaacttt
gcctcgctgcaggagggtgagatctacaacgccgaccgtgaggacatgtttggctga
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integrated database retrieval system
