Thunnus thynnus (Atlantic bluefin tuna): 137186179
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Entry
137186179 CDS
T11154
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tty03036
]
137186179 (chd9)
Chromosome and associated proteins [BR:
tty03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
137186179 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
137186179
NCBI-ProteinID:
XP_067450985
LinkDB
All DBs
Position
1:29704563..29783221
Genome browser
AA seq
3026 aa
AA seq
DB search
MDFFDDPNLFVGGLDGLDEEGFPSAPSLVDELNLSADFEPLQVEPLGPGKHQDMMPPVSS
TSTQQAMPTYSHQIGHYIGMKAQNPMGQAFSGPGGTGGGDGGMIAEQHGQYHNATMTQVP
QSNGLFCNSSSPMWGNQDQNGNMYHPLSQQQQQLCHQQQQLHNQQLHVRQQQTQQQHHPC
HHQQQQQHRMRQQQLQQQQSHQQQLLNQRQHQQINTQTMSLQQQQHHNFSFHQGSQTQSQ
QQVHHSQQQVQHQLTVGGPRFHSRALPSKSYLDSQNASLTGTCLQQQQQQGSYQLNRGGQ
AFSGSGLEDNNLPFPMHSSSVGHSLPTYSVSSASTYQPAQYPAYPGEPEITSLSQQSLSS
ASVSRPTTTVAPLTSTVPELSGTVCPFSSTSVMGQQHIRTPVSQAEECPFRALRCSGETQ
GSCKSSEMFGDSMSCYPSMASQLPSEQPQSCVAINTNGFQALGDNLLPSGAQDGDLEGLE
PPDLLPDLLPQLEAALSQQDESNCSWADSNHERGHEHRKSPPVENKDDKPRKNTNGPGSQ
VRVLSPPMKSSSSSSSSSSSSSSSSSSSSEKRTSRRAHHQMESTQLEKQEKANRIISEAI
AKARQRGEKNIPRVMSPESFPSSSSQYKTHRDREHKGNGKARPKEKACRKACIVPSSKPK
QKAKIGKIVIKIGKKKKRKPPSSEEESDDDPPPRHTSKDDDSKRRSNRQVKRKKYAEELE
ARLSDEEVKVIVKAKKTNTAASKQPAVQLFVENPSEEDAAVVDKIMSSRIVKKEVSPGVV
VEVEEFFVKYKNYSYLHCEWATEQQLEKDKRIQQKIKRFKMKQAQRALFFADMEEDPFNP
DYVEVDRVLEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFEQLQAA
KPDSCRMERPPANLWKKREQSREYRNSNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLG
KTIQSITFLDEIYRAGIKGPFLIIAPLSTIANWEREFRTWTHLNVIVYHGSMVSRQMLQQ
YEMYFRDAQGRAIRGAYKFQAVITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLL
EGFKLMSLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDLKTEEQVQKL
QGILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANM
PNLVNTMMELRKCCNHPYLIKGAEEKILEDFREVYSPTAIDFHLQAMVQSAGKLVLIDKL
LPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSD
RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRN
SYEREMFDRASLKLGLDKAVLQSMSGRDNSLGGGTGGGAVQQQLSKKEIEDLLRRGAYGA
IMDEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFW
DKWAKKADIDVDMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGESDNDETKPKLRR
NHDRLNSYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTEWDVEAICRALLSYCLVH
YRGDDKIKSFMWDLIAPTEDGRTKELQNHLGLSAPVPRGRKGKKMKTQSSSFDIHKAEWL
RKHNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSQAQQVLDGVEASEINIWV
PEPDHSELPTLWWDTVSDKCLLLGIYKHGYEKYNTIRADPALCFLERVGRPDEKAIAAEQ
RGNDFMDGDVDDPEYKPAPALLKDDMEDDASSPGDLVVTDNAGDAVPVTEGESIYWPSSS
VLTARLRRLITASQRYTKSRQILHIHQAQSQQTMIMSAPLCPLPPTLNDTLNPKMAAKIE
RQQRWTRREEADFYRVVSTFGVVFDPDLGRFDWTKFRAMARLHKKTDESLQKYLCAFTAM
CRRVCRLPPKEGDSAVDPSLTIQPITEERASRTLYRVELLRQVREQVLRHSLLYERLSLC
QMSSDLPVWWEAGTHDRDLLIGAAKHGVSRTDYHILRDPELCFMAAQRNYSQTKAAQQQS
RTSTPLLHPQYQATSSVLTGSPAPPTAPRDPEPCGVVPKVEPASEGEDSREKHGESWSPP
RAPATPTGLEEKPIPEMRDSERQMVAARTKPLTPNSSERKPKKTSKRSRREARRGSESDS
DGSSSSSSSRSSSSSSSSSSSSSHSGSSSSSSSSSCSSGSSSSSSSSSSSSDDSESEGEE
GKKKVPAATSVKGFDEDSVASLSTTQDETQDTHVAENGITNNSSHPFQGGGYMLAASYWP
KDRVIINRLDSICQAVLKGKWPGTRRAYEPGGAVASFYTTKLLDNANSLCEDPSASPQGS
KVTKHVAENKEFSVKLNDQEGGLKLTFQKQGLPLKRPLETEEGPQAQQQYLARLQELQSA
SDTGLADITKPHCSFQNVPPGVAGQMRLNGVVDGQPVVKRRRGRRKNVEGMDLLFMNKSR
APAVSDQVPPGWGGIGQVGMAAAAVPGYSQSSSQSPADTEIRVPVINLKDGTRLAGDDAP
KRKDLEQWLKEHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNSLTG
DERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMFDRI
LTGPIVPEEVSRRGRRPKNPLAKAAAAATAAAAAAAPNPAASTLGLNPLLTNGLLSGMDL
TSLQAFQQNLQSLQSLQLTAGLMGLPSDASNLAASNLAAMFPMMLSGMAGLPNLLGMSSL
LGKPAQEGAAGTEDKAKGTASGGTGEPSASKAPSHTSDTKGERTEGSNTTPSSTYSATSS
ATAPQSASAASAASGHPLSLNPLLLSSMIYPGMLLTPGLNLPVSATQQQSSNSDPTPPAA
SQSSPQETQRPAAEKDREEEEEEEEEEEEEEEDDEALEEEEEDDDEESAEQKENSGPEGL
GKAESSSSESGSSSSSSDNSDSSDED
NT seq
9081 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttgatgaccctaacctctttgttggaggtttggatgggctggatgaagaa
ggtttcccctcagcaccgtcactcgtggatgagctaaatctcagtgctgactttgagccc
ctccaagtggagcctctaggcccggggaagcaccaagacatgatgccaccagtttcttcc
acatccacccaacaagccatgcccacttacagtcatcagataggccactacattggcatg
aaggcacagaatcctatggggcaggcattttctggtcctgggggcacaggtggtggagat
ggtggcatgattgcagagcaacatggccagtaccataatgccaccatgacacaagtacct
caatccaatgggctgttctgtaacagtagcagtccaatgtggggcaaccaggaccagaat
gggaatatgtaccaccccttatctcaacagcaacaacagctttgtcatcagcagcagcaa
ctgcacaaccagcaactgcatgtaagacaacaacaaacacagcagcaacaccacccctgt
catcatcaacaacagcagcagcacagaatgcggcagcagcagctgcaacaacagcaaagt
catcagcaacagctgttaaaccagcgccagcaccaacaaattaacacacagactatgtcc
ctgcagcaacaacagcatcacaatttctcctttcaccagggaagtcaaactcagagccaa
cagcaagttcaccatagtcagcagcaggttcagcaccagctaactgtaggaggaccaagg
ttccattcaagggctctgccaagtaagtcctatctggatagtcaaaatgcttctctgact
ggaacttgcttacaacaacagcagcagcagggtagctaccagttgaacaggggaggtcaa
gccttctctggatcaggactggaagacaataacctgcccttccccatgcattcatcatct
gtgggtcactccctgcccacgtactcggtcagttctgccagcacctaccaaccggctcag
taccctgcctaccctggagaaccagaaataaccagtctcagtcagcagtctttgtcatca
gcatcggtgtctaggcccaccacaactgttgctcccctcacttctacagtgcctgagctc
tcagggacagtatgcccgttttcatccacatcagttatgggtcaacagcacattaggacc
ccggttagccaggcagaggaatgtcctttccgtgctttacgctgttctggagaaacccag
ggaagctgtaagtcatctgagatgtttggtgattctatgagctgctaccccagcatggcc
agtcagctgccctctgaacagcctcagagttgcgtggccatcaacactaatggatttcaa
gcattgggagacaatctcctgccatcaggtgctcaggatggggacttggaggggttggaa
cctcctgacctcctgcctgacctactgccccagctggaggctgctcttagccagcaggat
gaatccaactgttcctgggctgattccaaccatgagaggggacatgagcaccggaagtca
ccacctgttgagaacaaggatgacaagcctcgaaagaacactaatggtcctggtagccag
gtacgggtcctcagtcccccaatgaagagcagctcatcgtcctcctcctcttcctcatca
tcttcatcctcatccagctcctcatcggagaagaggacttcgcggagggcgcatcatcag
atggagtcaactcagctggagaagcaggagaaggccaataggataatatcagaggctatt
gcaaaagcccggcagcgcggtgagaagaacatccccagagtcatgagcccggagagcttc
cccagctcttcctctcagtacaagacccaccgtgaccgcgagcataaaggaaatggcaag
gcaaggcccaaagagaaggcctgtaggaaagcctgcattgtaccttcctccaagcccaag
cagaaggccaagatcgggaaaattgtcataaagattgggaagaaaaagaagagaaagcca
ccgtcttcagaggaggagtcggatgatgaccctccacctcgacacacttctaaagacgac
gactcgaagaggcgatctaatcgccaggtgaaaaggaagaagtatgctgaagagctggag
gccaggctgtcagatgaggaagtcaaggttattgtcaaagccaagaaaaccaacactgca
gcatccaagcagcctgctgttcaactctttgtagaaaatcctagtgaggaggatgctgct
gttgttgacaaaatcatgtcctctcgtatcgtcaagaaggaggtctctccaggagtggtg
gtggaagtggaggagttttttgtaaaatacaaaaactactcctacctacactgtgagtgg
gctacagagcagcagctggagaaagacaagaggattcagcagaagatcaaacgcttcaag
atgaaacaagcacagagggcgctcttcttcgcagatatggaagaggacccctttaaccct
gactacgtagaggtggacagagtgctggaggtgtcatattgtgaggacaaagacacaggg
gaggaggtggtgtactacctggtgaagtggtgctctttgccttatgaggacagcacctgg
gagctgaaggacgacgtagatcagagcaagattgaagagtttgagcagctgcaggcagcc
aagccggactcatgcaggatggagcggcccccagccaatctgtggaagaagagggagcag
tcgagagaatacaggaatagcaacagcctcagggactaccagctagagggggtcaactgg
ctcctcttcaactggtacaacagacggaactgcatcctggcagacgagatgggcctggga
aagaccatccagtcaatcacattcctagatgaaatctatcgcgcgggcatcaaggggcca
ttcctcataattgctccactctccaccattgccaactgggagcgcgagttccgtacttgg
acccatcttaatgtcatcgtctatcatggaagcatggtcagcaggcagatgctccagcag
tatgagatgtatttcagggatgcacagggccgtgcgatacgaggtgcttacaagttccag
gctgttatcaccacatttgagatgatcttgggaggctgtcccgagctcaacgccatagag
tggcgctgtgttatcatcgatgaggcccaccgcctcaagaacaagaactgcaagctgcta
gaaggcttcaagctcatgagtctggagcacaaggtcctgctgacaggaactcctcttcaa
aacacagtggaggagcttttcagcctgcttcacttcctggagcctgcacgcttcccctca
gaaaacaccttcatgcaggagtttggagacctcaagactgaggagcaggtacagaagctt
cagggtatcttaaagcccatgatgctgcgtcggttgaaggaggatgtggagaagaagttg
gcccctaaagaagaaaccatcatagaggttgaactcaccaacattcagaagaaatactac
cgtgccatcctagagaagaacttttctttcctggctaaaggagctggccaggcaaatatg
cccaacctggtcaacacaatgatggagctgagaaagtgctgcaaccacccctacctcatc
aaaggggcagaagagaagatcctagaggacttcagggaggtgtatagtcctactgccatc
gactttcacctgcaggctatggtgcagtctgccgggaagctggtcctcattgacaaactg
ctgcccaagatgaaggccggagggcacaaggtgctcatcttctcccaaatggtgcgctgc
ctggacatcttggaagactacctcattcagagaaggtacttgtatgagcggatagatgga
cgtgttcgtgggaacctgcggcaggccgccattgaccgcttcagcaagcctgactcagac
cgcttcgttttccttctgtgtacaagagctggaggcctgggaatcaacctcacagcagca
gacacctgtatcatctttgactctgactggaacccgcagaacgacctgcaggcccaggct
cgctgccatcggatcggtcagaacaaggcagtgaaggtgtaccgtctgatcaccaggaac
tcgtatgagcgggaaatgtttgatcgtgccagcctcaagctgggtttggacaaagcagtg
ttgcagagcatgagtggccgagataacagcctgggaggaggtactgggggaggggcggtg
cagcagcagctgtctaagaaggagatcgaggatctgttgcgacgtggtgcctatggggcc
atcatggatgaggaagatgaaggggccaaattctgtgaggaggacatcgaccagatcctc
cagcgcaggacaaagaccatcaccattgagtctgagggacgaggatccacctttgcaaag
gccagttttgtggcatccggaaaccgcacagacatctctctggatgaccccaacttctgg
gacaagtgggccaaaaaggcagacatcgatgtggatatggtcaatggcagaaacagcttg
gtgattgacactccccgtgtcagaaagcagactcggcccttcagcgccaccaaggatgag
ctggcagagctttccgagggtgaaagcgacaatgacgagaccaaacctaaactcaggcga
aaccatgaccgcctcaacagctatggacgcacagagtgcttcagagtagagaagaacctg
cttgtatacggctggggtcgttggaaagatattctcaaccatgggcgttttaagaagcag
ctgacagagtgggatgtggaggccatctgcagggccctgctgtcctactgcctggtccat
tatcgtggagatgacaaaatcaaaagcttcatgtgggacctgattgctcctactgaagac
ggacgcactaaggagctgcagaatcaccttggtttgtctgctccagtccctcgaggcaga
aagggtaagaagatgaagacccagtccagctcttttgacatccacaaggctgagtggcta
aggaagcacaacccagagcacatgcttcaggacgacggctacaagaaacaccttaaacat
cactgcaacaaggtgctgctcagggtcagaatgctctactacctgaaacaggaggtgata
ggaagccaggcccagcaggtactagacggcgtggaagcaagtgagataaatatctgggtg
ccagagcctgatcattctgagcttccaaccttgtggtgggataccgtctctgataagtgt
ctgctgctgggtatctacaagcatggttatgaaaagtacaacactatccgtgcagaccct
gccctgtgcttcctagagcgtgtgggacgaccggatgagaaggccatcgctgccgaacag
agaggcaatgatttcatggatggggatgtagatgatccggaatacaagcctgctccagcc
ctgctgaaggacgatatggaggatgatgcctcttctcctggagacttggttgtcactgac
aacgctggagatgcagttccagtgacggaaggtgaaagtatctattggccttcttcttcg
gtgctgactgccaggctgaggcgtctgatcacagcctcccagcgctacaccaagagccgg
cagatcctccacatccaccaggctcagtctcagcagaccatgataatgtctgctccgctc
tgcccgctgccccccacactcaacgacaccctcaaccccaagatggctgctaagattgaa
cgccaacaaagatggaccaggcgagaggaggctgacttctatcgggtggtctccactttt
ggtgttgtttttgacccagaccttggacggtttgactggaccaagttcagggccatggct
cgactgcacaagaagactgatgagagtctgcagaaatacctgtgtgctttcaccgccatg
tgcaggcgggtgtgtcgcctgccacccaaggaaggagactctgcagtggacccatctctg
accatccagcccatcacagaggagcgagcgtctcgcacactgtacagagtagagttgctt
cgccaggtgagagagcaggtccttcgtcactcattactctatgagcgcctgtcactgtgt
cagatgagctctgacttacccgtgtggtgggaagctggtactcatgaccgtgacctgcta
attggtgctgccaagcacggcgtcagccgcacagactaccacattcttcgagaccctgag
ctctgcttcatggctgcccaacgcaactacagccaaacaaaagctgcacagcagcaatca
cgcacatccaccccgctcctacaccctcagtaccaggccaccagctcagtgttgacaggc
tcaccggcgcctccaacagccccgagagacccagagccctgtggggttgtacccaaagtc
gaaccagcctcagaaggggaggatagcagggagaagcatggggagagttggagtcctcct
cgagcgccagctactcctacaggtctggaggagaagcctattcctgagatgagggacagt
gaaaggcagatggttgcagcacgaacgaagcctctcactcccaactcctcagagaggaaa
cccaagaagaccagcaagagaagccgcagggaggccaggcgtggctcagagtccgactca
gatggctcctcctcaagctcttcatcccgctcctcttcctcttcatcatcatcgtcttct
tcctcgtcacattccgggtccagctcttcctcctcttcatcgtcttgctcctctggctct
tcatcgtcatcctcctcttcctcatcatcttctgatgacagtgaaagtgagggagaggaa
ggaaagaagaaagtgcctgcagcaacaagtgtaaagggctttgatgaggacagtgtggca
tctctgagcactacacaggatgaaacgcaagacacccatgtggctgagaacggcatcacc
aacaactcttcgcatcctttccagggaggaggatacatgcttgctgcatcgtactggcca
aaggatcgagtgattatcaaccgcctggacagcatctgccaggcagtgctaaagggcaag
tggccaggaacacgccgggcctacgaacctggaggtgcagtggcctccttttacaccacc
aagctgctggacaacgccaacagcctgtgcgaggacccctctgcctcgccacaagggtca
aaggtgaccaagcatgttgcagaaaacaaggagttctcagtaaaactgaacgatcaggaa
ggaggtctgaagttgaccttccagaaacagggtctccctctaaagaggcccctggagaca
gaggagggcccccaggcccagcagcagtacctggcccggcttcaagagctgcagagcgcc
tcggacacaggcctggcagacatcaccaagccacactgcagcttccagaacgtgcctcca
ggtgttgctggtcagatgaggctgaacggagtagtagatggtcagccggtggtaaagagg
cgaagggggaggaggaagaatgtggaggggatggacctgctcttcatgaacaagagtcga
gcccctgctgtctctgatcaggtgcctccaggatggggtggtattggccaggttggcatg
gctgcagctgctgtgccgggctacagtcagagctctagtcagagccccgcagacacagag
atcagggtccctgtcatcaacctcaaagatggcacccggcttgctggggatgacgctcct
aagaggaaagatctggaacagtggctgaaagagcaccctggctttgttgcagacacagga
gcctttatacctggggtgaataagatgcaaatgcagttccacttccaggacggtcggccc
aagcagaagaggcaccgctgtaggaaccccaacaagatcgatgtcaacagcctgacagga
gatgaaagggtccagatcatcaacaggagaaacgcgcgcaaggtcggtggagcctttgct
cctcctctgaaggatctgtgccggttccttcaggagaacccagagtacggagtcccacct
gaatgggcagatgttgtcaaacagtcgggttacctcccagagagcatgtttgacaggatc
ctgacaggacccattgttcctgaggaggtgagccggcgtggacggcgacctaagaatcct
ctggccaaggcggcagcagcagctacagcggcggcggcggcagcagcaccaaacccagca
gcctccaccctgggcctgaaccccctgctgaccaatggcctcctctctggaatggaccta
accagcctgcaggccttccagcaaaacctgcagagcttacagtccctgcagctcaccgca
gggcttatggggcttccatccgacgcaagcaacctggccgcaagtaacttagctgccatg
tttcccatgatgctgtctggtatggcgggattgccgaacctgcttggcatgagcagcttg
cttgggaagcctgctcaggagggcgcagctggcaccgaggacaaggcgaagggaactgcc
agcggtggaacaggagagccgtctgcctctaaagccccttctcacacctcagacaccaaa
ggagaaaggaccgagggctcgaacacaactccttcctccacttacagcgccacttcctct
gccaccgccccacaaagtgcttcagctgcctcggcagcctccggtcacccactgtctctt
aaccccttgttactctccagtatgatttacccagggatgcttctcactccaggccttaac
cttcctgtgtctgccacacagcagcagagctcaaacagtgatcccacccctcctgcagcc
tcccagtcatcgccacaggagacacagcggccagcagcagagaaggacagagaggaagag
gaggaggaggaggaggaggaggaggaggaggaggaggatgacgaggctttggaggaagaa
gaagaagatgacgatgaggagtcagcagaacaaaaagagaacagtggtcctgaaggtttg
ggaaaagcagagtcatcttcatcagagtctgggagctcgtcttcatcctcagacaattca
gactccagtgatgaggactga
DBGET
integrated database retrieval system
