Thunnus thynnus (Atlantic bluefin tuna): 137186262
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Entry
137186262 CDS
T11154
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03030
DNA replication
tty03420
Nucleotide excision repair
tty03430
Mismatch repair
tty03440
Homologous recombination
tty03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137186262 (rpa1)
03420 Nucleotide excision repair
137186262 (rpa1)
03430 Mismatch repair
137186262 (rpa1)
03440 Homologous recombination
137186262 (rpa1)
03460 Fanconi anemia pathway
137186262 (rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tty03000
]
137186262 (rpa1)
03032 DNA replication proteins [BR:
tty03032
]
137186262 (rpa1)
03400 DNA repair and recombination proteins [BR:
tty03400
]
137186262 (rpa1)
Transcription factors [BR:
tty03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
137186262 (rpa1)
DNA replication proteins [BR:
tty03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
137186262 (rpa1)
DNA repair and recombination proteins [BR:
tty03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
137186262 (rpa1)
MMR (mismatch excision repair)
137186262 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
137186262 (rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
RADX
DUF223
A_deaminase
Motif
Other DBs
NCBI-GeneID:
137186262
NCBI-ProteinID:
XP_067451154
LinkDB
All DBs
Position
7:complement(23677022..23715289)
Genome browser
AA seq
600 aa
AA seq
DB search
MTKLSEGAIEALSNGNGGNDAVLQLVNIRKIDGGNGPARFRVMMSDGRHSLSSFMLSTQL
NFMAEENKLAPNCICILKRHVTNILKDGRRVVIILEIDVIKPAEDVAGRIGDPTPYTEGQ
SKAPKAAPNPVNRPPLQQQNGNEGNRGFNRDFGKKAPSAMPSTPGGGSKVVPIASLNPYQ
SKWTIRARVTNKSSIRTWSNSRGDGKLFSMEIVDESGEIRVTGFNQEVDKFFSLIEVGKV
YYVSKGSLKIANKQYTSVKNDYEMTLNGESTVIPCEDSCDVPMVQCDFVSISELENRDKD
AIVDVIGVCKTVDEVTRLTTKSNREVSKRTLSLMDMSGKVVSVTLWGEEAENFDGSGQPI
LAIKAAKLSDFGGRSLSASFSSTLMINPDIPEAYKLRGWYDKEGHAMDGQSLTEVKGGSG
GGNTNWKAISDVKNEHLGHGDKADYYTCIATIVYLRKENCLYQACPSQDCNKKVVDQQNG
MFRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQLKDSNEA
AFDEIFQQANFNTFVFRNRVKLETYNDESRIKATVMDVKPVDHKDYSKRLIMNIRKLAAQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaactgtcagaaggtgcgatagaggctctgtcaaatggcaacggtggaaacgac
gcagtgcttcagttggtgaacattcgcaagatcgatggaggaaatggtccagctcgcttt
cgggtgatgatgagtgatggacggcacagtctgtcctccttcatgctctccacccagctg
aacttcatggcggaggagaacaaactggcccccaactgcatctgcattctcaagagacat
gtgaccaatatactgaaagacggacgacgcgtggtaatcattttggaaattgatgtaatc
aaacctgccgaagatgttgctgggagaatcggagaccccacaccttacactgaaggtcag
agcaaagccccgaaggcggccccaaaccctgtaaaccgccctccgctgcagcaacaaaat
ggaaatgaagggaacagaggattcaatagagattttgggaagaaggccccgtcagctatg
cccagtactccagggggtggctccaaagttgtgcccattgccagcctcaacccctaccag
tccaagtggacaattcgtgctcgtgtaaccaacaagagcagtatccgtacatggagcaac
tctcgcggtgatggaaaacttttctcaatggagattgtggatgagagtggagaaataaga
gtgactggtttcaaccaagaggtggacaagttcttcagccttattgaagttggcaaggtc
tactatgtgtctaagggctccctaaagattgccaacaagcagtacacatcagtgaagaat
gactatgagatgacactcaacggagagtccactgtcatcccctgtgaagacagctgcgat
gttcccatggtgcagtgtgactttgtctccatcagcgaactggagaacagagacaaggat
gccatcgtggatgtgattggagtgtgcaagactgtggacgaggtgacccgcctcactacc
aagtcaaaccgtgaggtttccaagaggacactcagtctgatggacatgtctgggaaggtg
gtgtctgtcacactgtggggagaggaagcagaaaattttgacggctctggacagcccatt
ctagccattaaggcggcgaagctctcagacttcggaggccggtccctctctgcatccttc
agcagcaccctgatgatcaacccagacatccctgaggcatataagctcagaggctggtat
gacaaagagggtcatgccatggacggacagtctctgacagaggtgaaaggtggcagcggt
ggaggaaacaccaactggaaggctatatctgatgttaaaaacgagcacctgggacacgga
gacaaggcagactactacacctgcatagcaactattgtgtacctgcgcaaggaaaactgc
ctttaccaggcctgcccgagccaagactgcaacaaaaaagtggtagaccagcagaatggc
atgttccgctgtgaaaagtgtgacaaagagtttcccaacttcaagtaccgcctcatcctt
tctgccaacatcgcagattatggggacaaccagtgggtgacttgcttccaggagagtgca
gaggccattctgggccagaatgcagcttacctgggacagctcaaggactcgaatgaagct
gcttttgatgagatcttccaacaagccaacttcaacactttcgtcttccgcaacagagtg
aagctagaaacatataacgatgaatccaggatcaaggctacagtgatggatgtgaagccc
gttgaccataaggactacagcaagaggttgatcatgaacataaggaaactggctgcccag
tag
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integrated database retrieval system
