Thunnus thynnus (Atlantic bluefin tuna): 137186597
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Entry
137186597 CDS
T11154
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04136
Autophagy - other
tty04140
Autophagy - animal
tty04145
Phagocytosis
tty04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
137186597 (atg16l1)
04140 Autophagy - animal
137186597 (atg16l1)
04136 Autophagy - other
137186597 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
137186597 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137186597 (atg16l1)
03029 Mitochondrial biogenesis [BR:
tty03029
]
137186597 (atg16l1)
Membrane trafficking [BR:
tty04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
137186597 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
137186597 (atg16l1)
Mitochondrial biogenesis [BR:
tty03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
137186597 (atg16l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
ATG16
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_Aladin
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_VPS8
NBCH_WD40
Beta-prop_NOL10_N
Beta-prop_DCAF4
Beta-prop_EIPR1
CFAP251_N
eIF2A
Tricorn_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_ACSF4
Beta-prop_NWD2_C
CNN1_N
AP5B1_middle
KASH_CCD
CC_Bre1
FKBP15
Mis12
Motif
Other DBs
NCBI-GeneID:
137186597
NCBI-ProteinID:
XP_067451744
LinkDB
All DBs
Position
7:34122581..34143385
Genome browser
AA seq
621 aa
AA seq
DB search
MAERQVGSTWKKHIAEQLKLRDRVQKHAFEEIVHQYLHLLEKSDLQAVLSERYQTEKYDI
QRGHEASSGADSGRCDVLQQEMAQMRIKHQEELTELHKKRGELAHNVIELKNQIQEKDKE
IQSNEAMMLEYQQQIAKLEGDCRELRSFLQDLERANQTLKDEYDALQITFSALEEKLRKT
TEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQAKLQKELADAAKEPLPIDPDDDIEVL
AEDAGKGGGETSPNRPLNRTPSKKVSQPPPGGLLDSISNIFGVSECVQPGLVPPHSSRRR
TANSFSTSPESTEAPSGVCAEVRVPCTALHVFEAHDGEVNAVRFSPGSRLLATGGMDRRV
KLWEVVSGRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTG
HSGKVLSARFLLDNARIASGSYDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCIMSGH
FDKKVRFWDSRAETIVQELELLGRVTSLDLNHDRTELLTCTRDDLVKIIDLRSNAVRQTF
SAQGFKCGADWTRVTFSPDGSYVAGGSADGALYIWNVLTGKLEKTLDRNHNSAINSVSWS
PSGAFVASVEKGSKAILWSDM
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggcaggtggggagcacatggaagaaacacatcgctgagcagctgaagctc
agagaccgagtgcagaaacacgccttcgaggagatcgtccaccaatatcttcatctgctg
gagaagtcggacctgcaggctgttctgtcggagagatatcagactgagaagtatgacatc
cagagaggacacgaggccagttcgggggcggactcgggccgctgtgacgtgctgcagcag
gaaatggctcagatgagaatcaaacaccaggaggagctgacggagctgcacaagaaacga
ggagagctcgctcacaatgtgatcgaactgaaaaaccagatacaagagaaagacaaagag
atccagagcaacgaggccatgatgttggagtatcagcagcagatcgctaagctggaggga
gactgtcgggagctgaggagcttcctgcaggacctggagagagcgaaccagaccctgaag
gacgagtacgacgctctgcagatcaccttcagcgctctggaggagaagctgaggaaaacc
acggaggacaaccaggagctggtgtcccgctggatggctgagaaggctcaggaggcgaac
cggctcaacgccgagaacgagaaggacagcagacgcagacaagccaaactacagaaggag
ctggccgacgccgccaaagagcctctgcccattgacccggacgacgacatcgaggttctg
gcagaggatgctgggaaaggaggcggagagacgtcaccgaaccgaccgctcaacagaact
ccgagtaagaaggtctcccagcctcccccaggtggtctgctggactccatctccaacata
tttggcgtgtctgagtgtgttcagcctggactcgtcccaccgcactccagcaggcgtcga
accgccaactccttcagcacgtcaccagaaagcaccgaggctccgtcgggcgtgtgcgcc
gaggttcgggtcccgtgcacggcgctgcacgtgtttgaagcccacgatggcgaggtgaac
gcggtgaggttcagccccggctctcgtctcctagcaacaggagggatggaccgccgggtg
aagctgtgggaggtcgtctcaggtcgctgtgagcctaaaggagctctgaccggcagcaac
gcaggaatcaccagcatcgagtttgacagcgctggctcgtacctgctcgctgcctccaat
gactttgcgagtcggatctggacggtagacgactacagactgaggcacacactgacgggt
cacagcgggaaggttctgtcagctcgcttcctattggacaacgctcgaatcgcctccgga
agctacgaccgaacgctcaaactgtgggacctccgcagcaaagtctgtatcaagacggtg
tttgctggttccagctgtaacgacatcgtctgcacggagcagtgcatcatgagcggacac
tttgataagaaggttcgcttctgggacagcagagcggagactatagtgcaggagctggag
ctgttgggcagagtcacgtctctggatctgaaccacgaccgcactgagctgctcacctgc
accagagacgacctggtcaagatcatcgacctgcgctccaacgccgtcagacagacgttc
agcgctcagggcttcaaatgtggagccgactggaccagagtcaccttcagtcctgacggc
agctacgtggccggcggatcagctgacggagctctgtacatctggaacgttctgacgggg
aaactagaaaaaactctggaccgaaaccacaactctgccatcaactcggtgtcctggtca
ccgtcaggagcgttcgtcgccagcgtggagaaaggcagcaaagccattctgtggtctgac
atgtga
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