Thunnus thynnus (Atlantic bluefin tuna): 137187583
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Entry
137187583 CDS
T11154
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03018
RNA degradation
tty03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137187583 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
137187583 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137187583 (lsm4)
03041 Spliceosome [BR:
tty03041
]
137187583 (lsm4)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137187583 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
137187583 (lsm4)
Spliceosome [BR:
tty03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
137187583 (lsm4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
137187583
NCBI-ProteinID:
XP_067452687
LinkDB
All DBs
Position
8:12820902..12825350
Genome browser
AA seq
143 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGAQQNKQQGKGRGGAGRGLFGGRGRGMTG
AGRGLQQQQDKKPGKPQGMKNQH
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctgtcactgctgaagactgcccagaaccatcccatgctggtggagctgaag
aatggagagacgtacaacggtcacctggtcagctgtgacaactggatgaacatcaacctg
agagaagtcatttgcacctcaagggatggagataagttctggaggatgccggagtgctac
atccgaggaagcactatcaagtatctacgaatcccagatgagatcatcgacatggtgaag
gaggaggtggtgtcgaagggtcgcggacggggaggcgcccagcagaacaaacagcagggc
aaaggaagaggaggagccggccgaggtttgtttggcggtcgtggcagaggaatgaccggc
gctggtcgaggcctacagcagcagcaggataagaaaccaggcaaaccacagggaatgaag
aaccagcactga
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integrated database retrieval system
