Thunnus thynnus (Atlantic bluefin tuna): 137188264
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Entry
137188264 CDS
T11154
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04136
Autophagy - other
tty04140
Autophagy - animal
tty04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
137188264 (atg4b)
04140 Autophagy - animal
137188264 (atg4b)
04136 Autophagy - other
137188264 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tty01002
]
137188264 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137188264 (atg4b)
03029 Mitochondrial biogenesis [BR:
tty03029
]
137188264 (atg4b)
Peptidases and inhibitors [BR:
tty01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
137188264 (atg4b)
Membrane trafficking [BR:
tty04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
137188264 (atg4b)
Mitochondrial biogenesis [BR:
tty03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
137188264 (atg4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Dysbindin
Motif
Other DBs
NCBI-GeneID:
137188264
NCBI-ProteinID:
XP_067453946
LinkDB
All DBs
Position
8:complement(28974499..28982698)
Genome browser
AA seq
398 aa
AA seq
DB search
MDAATLTYDTLRFGEFEDFPETSDPVWILGKEYNALTEKDEILSDVTSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALVCRHLGRDWRWVRGQKQREEYISILNAFIDKKD
SYYSIHQIAQMGVGEGKPIGQWYGPNTVAQVLKKLAVFDTWSRLVVHVAMDNTVVIEEIK
LLCMPWLDPAGACGESEGVGELNGCLEGACALSEEETALWKPLVLLIPLRLGLSDINEAY
IETLKQCFMLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPCEDGQVPDETY
HCQHPPCRMHICELDPSIAAGFFCRTEDEFDDWCMRIRRLSCNRGGLPMFELVDSQPSHM
VSVDALNLTPAPFADFSDSDRLERFFDSEDEEFEILSL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctaccttgacatacgacacacttcgcttcggagagtttgaagattttcct
gagacctcagaccctgtttggatcttaggaaaagaatacaatgcactcacagagaaagat
gagattttatcagatgtcacttcacgactgtggttcacatacagaaaaaacttccctccg
atcgggggaacaggaccaacatcagatacaggatggggatgtatgttgcgttgcggccag
atgatcctcggcgaggctttggtgtgtcgacatttaggcagagactggagatgggtcaga
ggccagaaacaaagagaagagtacatcagtattctcaacgccttcattgacaaaaaagac
agctattattccatccatcaaatcgctcaaatgggagttggagaaggaaagcctataggc
cagtggtatggaccaaacacagtcgcccaggttctaaagaagctggcagtgttcgataca
tggagcagattagttgtacacgtggcgatggacaacaccgtggtcatcgaggagatcaag
cttctttgtatgccttggctggaccctgcaggagcctgtggtgagtcagagggagtgggt
gagctcaatggctgcctggagggtgcatgtgccctgtcagaggaggagacggctctctgg
aaacctctcgtcctgctcatccccctcaggctgggcctgagtgatataaatgaggcctac
attgaaaccctcaagcaatgcttcatgctgcctcagtccctgggtgttattgggggaaaa
cccaacagtgcccattacttcattggttatgtcggggaggagctcatctacttagacccg
cacaccacacagccggcggtggagccgtgtgaagacggccaggtccccgatgagacgtac
cattgtcagcacccgccttgtcgcatgcacatctgtgaactggacccgtccattgcagcg
ggtttcttctgcagaacagaggacgagtttgacgactggtgtatgcgcataagaaggctc
tcctgcaacagagggggcttgcctatgtttgaactagtagacagtcagccctctcacatg
gtcagcgtggatgcccttaaccttactcctgctccctttgcagatttctccgactcggac
aggttggaacggttctttgattcagaagacgaggagttcgagatcctttccttgtga
DBGET
integrated database retrieval system
