Thunnus thynnus (Atlantic bluefin tuna): 137188685
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Entry
137188685 CDS
T11154
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03020
RNA polymerase
tty03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
137188685 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
137188685 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tty03021
]
137188685 (polr2b)
03400 DNA repair and recombination proteins [BR:
tty03400
]
137188685 (polr2b)
Enzymes [BR:
tty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
137188685 (polr2b)
Transcription machinery [BR:
tty03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
137188685 (polr2b)
DNA repair and recombination proteins [BR:
tty03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
137188685 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
137188685
NCBI-ProteinID:
XP_067454407
LinkDB
All DBs
Position
9:complement(35404490..35426191)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAFTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccaggacgaagataaccagtatgacgaggacgatgatgaaatcactccagat
ctgtggcaggaagcctgctggatcgtcatcagctcgtattttgacgagaagggtttggtg
cggcagcagctggactcgttcgatgagttcatccagatgtcggttcagcgcatcgtggag
gacgctccgcccattgacctgcaggctgaagcccagcacacctctggagaggtggaggag
ccgcctcgttacctgctgaagtttgagcagatctacctgtccaagccgacccactgggag
agagacggagcaccgtcccccatgatgcccaatgaagcccgactccgaaacctcacgtac
tcggcccccctgtacgtggacatcactaaaaccatcattaaggagggtgaggaccaactg
cagactcagcaccagaaaaccttcattgggaaaatacccatcatgcttcgctccacctac
tgcctgctgagcgggctgacggatcgtgacctgtgtgagctcaacgagtgtccactggac
cccggaggttacttcatcatcaatggctccgagaaggtgctgattgcacaggagaagatg
gccaccaacactgtgtatgtgtttgccaagaaagactcaaagtacgcgttcaccggagag
tgtcggtcctgcctggagaactcatcccgtcccaccagcaccatctgggtcagcatgatg
gctcgtggagggcagggagtaaagaagagcgccatcggtcagaggatcgtgtccacgctg
ccgtacatcagacaggaagttcccatcatcattgtgtttcgagcgctgggcttcgtttcg
gacagagacatcctggaacacatcatctatgactttgatgaccccgagatgatggagatg
gtgaagccgtccctggacgaagcatttgtgatccaggagcagaacgtggcgttaaacttt
atcggttccagaggagcgaaacccggagtgacaaaagaacgtagaatcaaatacgctaaa
gaagttctgcagaaagagatgctgccacacgtcggagtcagcgacttctgtgagaccaag
aaggcttacttcctagggtatatggtccacaggttgctgcttgccgctttgggaagacga
gagctggacgacagagatcactatggaaacaagaggctggacttggccggaccgctattg
gccttcctgttcagaggcatgtttaagaacctgctgaaggagatccggatttacgctcag
aagttcattgacagagggaaagacttcaacctggagctcgccatcaaaacccgaatcatc
tccgacggcctcaagtactcgctggccaccggaaactggggcgacgtcaagaaggctcac
caggcccgagccggagtgtcacaggtgctgaaccgcctcacctttgcgtccactctgtcc
cacctacgccgagtcaactccccgatcggcagagacggcaaactggcaaaacctcgacag
ctgcacaacactctctggggaatggtgtgtccggccgaaacgcctgagggtcacgctgtg
ggtctggtgaagaacttggctctgatggcctacatctctgtgggctcccagccgtctccc
atcctggagtttctggaggagtggagtatggagaacctggaggagatctcgcctgctgcc
atcgcagatgccacaaagatctttgtgaacggctgctgggtcggcatccacaaagaccct
gaacagctgatgaacacactgaggaagctgcggcgacagatggacatcattgtgtctgag
gtgtcgatgatcagagacatcagagagcgtgaaatcagaatctacacggacgccggacgc
atctgccgaccgctgctgatcgtcgaaaagcagaaactgctgctgaagagacgacacatc
gaccagctgaaagagagagagtacaacaactacagctggcaggacctggtggcaagcggc
gtggtggagtacatcgacactctggaggaggagacggtgatgctcgccatgacccccgat
gacctccaggaaaagggcgtggcttactgctccacctacacccactgtgagatccatccg
tccatgatcctgggggtctgcgcgtccatcatccccttccctgaccacaaccagtctccc
aggaacacctaccagtcggctatgggtaaacaggccatgggagtctacatcaccaacttc
catgtacgaatggacacgctggctcacgtgttatattaccctcagaaaccactggtcacc
actcgatccatggagtacctgcgcttcagagagctgcctgcaggtatcaactccatcgtg
gccatcgcctcgtacacgggctacaaccaggaggactctgtgatcatgaaccggtcggct
gtggatcgaggcttcttcaggtctgttttctatcgatcctacaaagagcaggagtctaag
aaaggcttcgatcaggaggagatctttgagaagccgacacgtgaaacctgtcaggggatg
agacacgccatctatgacaagctggacgacgacggcctcatcgcgcccggcgttcgtgtc
tctggcgaggatgtgatcatcgggaaaactgtgacgctgccagagaatgatgacgagctg
gacagcaccaaccggcgctacaccaagagggactgcagcaccttcctgagaaccagcgag
actggcatcgtggaccaggtgatggtgaccctgaaccaggagggctacaagttctgcaag
atcagggttcgatcagtccggattccgcagatcggagacaagttcgccagccgacacgga
cagaaaggaacctgtggaatccagtacagacaggaggacatgccgttcacctgcgaggga
atcacgcctgacatcatcatcaaccctcacgccattccgtccagaatgacggtcggccat
ctgatcgagtgtctacaaggaaaggtgtcggcgaataaaggcgagatcggcgacgcgacg
ccgtttaacgacgccgtcaacgtgcagaaagtgtcaaacctgctgtcagagtacggatac
cacctgagaggcaacgaggtcctgtataacggcttcacgggtcggaagctgacatctcag
atcttcatcggtccaacttattatcagcgtctgaagcacatggtggacgacaagatccac
tcgagggcccgaggccccgtccagatcctcaacaggcagccgatggagggccgctcccgt
gacggcggtctccgtttcggggagatggaacgtgactgtcagatcgctcacggagcggct
cagttccttagagagcgtctgttcgaggcgtctgatccgtatcaagttcacgtgtgtaac
ctgtgcggactgatggccatcgccaacacacgcacgcacacgtatgagtgccgtggctgc
cgcaacaagacacagatctctctggtccggatgccgtacgcctgcaagcttttgttccag
gaattgatgtcgatgagtatcgctcctcgtatgatgacatcatag
DBGET
integrated database retrieval system
