Thunnus thynnus (Atlantic bluefin tuna): 137188980
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Entry
137188980 CDS
T11154
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
137188980 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tty03021
]
137188980 (polr1a)
Enzymes [BR:
tty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
137188980 (polr1a)
Transcription machinery [BR:
tty03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
137188980 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137188980
NCBI-ProteinID:
XP_067454685
LinkDB
All DBs
Position
9:complement(7069744..7090085)
Genome browser
AA seq
1696 aa
AA seq
DB search
MLFGKDVPWRRLEGMSFGLYSAEEIRKLSVKTITNFRFLDGVGNVAPNSLYDLALGPADN
KEVCSTCCQDFNNCPGHLGHVELPLPVYNPLFFDKLYLLIRGSCLACHMLTCPRAAIHLL
LNQLKLVDHGAMQDVYQAEQVLNQLLEENAKATGDEIEQALKEFTDSIVGVNVEASENSK
PIKHLVEKKSSLINDFWRIHMKTRKCPYCRSGRFTVRREHNSKLIVTMPSGAQTDSTNED
LVAGKRVYLTASTAREHTNKLWEKEGFFLKCLFSGLEEGSELMEGEKVFYPDLFFLELLV
VPPCRYRPINRLGDQMFTNGQTVNMQAVMKDCGIIRKLLALIAGEKTTQEEEAEAPEQTD
QSFLSGIPGVTLTDKLYNIWIRLQTHVNIVFDSDMDKMMTEKYPGIRQILEKKDGLFRKH
MMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLNGPNVH
PGASMVINEDGRRTILSPTNLAQREAVAKQLLTPCPGVQKMPMKIVNRHIKNGDVLLLNR
QPTLHRPSIQAHSARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYMLV
STDQQYLVPKDGKPLAGLIQDHMVSGTRMTIRGCFFTRDQYTELVYRGLTDKPGRVKLLP
PAIFKPQPLWTGKQVVSTLLLNVIPQKAVPLNLVGKSKIPSKAWIQEPPRAAPGYRPDSM
CDSQVVIRQGELLVGVLDKAHYGSSVYGLVHCCYELYGGETSGKLLSCLARLFTAYLQLY
RGFTLGVEDILVKQGANRQRKKIIQESLKIGTKALQAAFNLPSNVDQADAQSRWQDAHLN
PDQRDFSMADHKFKEVANQVNNEINKVCMPVGLHTSFPDNNLQLMVQSGAKGSTVNTMQI
SCLLGQIELEGRRPPLMPSGKSLPCFQPYDPAPGAGGFVSGRFLTGIKPQEFFFHCMAGR
EGLVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFL
QPRQFPFIEDNYEVIKRSQGLDDVLARLDPQTASKHFAAIQRWRTKREVASPRRGAFLLF
SQKKLAKLKQTELTAEPDAYGRDAAILQLVQQWHSLDEASRSKYSRKSSRCPEPSLGVFR
PDVCFGSVSENFHSITEKYLQNRTGTDSLDTHSLRQLLHYKWQRSLCDPGEAVGLLAAQS
IGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSVPVLNNKKALKRA
KTLRKKLTRVCLAEVLQKVDVVETLRIESGSHQKLRTFKVAFHFLPPDRYCDDKLLSPQQ
ILHYMETRFFRLLLEAIKKRSAKLASIAVETRKATPRDKDHDGEGTADTAGADDGEGEEE
REIVDDQGNEGDADASDAKRKDKQEEEVDYESEEEEGGGDDGEDKEDLGEEEEEAQENVE
NGSLEESQSESAGVRAERRKKRARRTGGGEESLNQMRVNSVLESNPAIERYCYDYQHELW
CEVELVLPVSKVHFDLTSVLSTLAQNAVIMETKGLTRCLLSENTTKTGEKETVLNTEGIN
MHEMFKHSDILDINRLYSNEVHAMANTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLV
ADYMCFEGVYKPLNRHAIRSNSSPLQQMTFETSYKFLKQATMLGSHDELVSPSACLVVGK
VVKGGTGLFELKQPLQ
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttggaaaagacgtgccatggcggcgtttggagggcatgtcgttcggcttgtat
tctgccgaagagataagaaagttgagtgtgaagacgatcactaacttcaggttcctcgat
ggtgttgggaatgtggcccctaacagcctgtacgatctggccctggggccagcagacaac
aaagaggtgtgttcaacctgctgtcaggacttcaacaactgtccaggacacctgggacac
gtagagctacctcttcctgtgtacaacccactgttttttgataaactctacctgttgatt
cgtgggtcatgtctggcgtgtcacatgttaacgtgtcccagagctgccatccatctgctg
ttgaaccagcttaagttagtagaccatggagccatgcaggacgtctaccaagcagagcaa
gttctcaaccagctcctggaggagaatgccaaagccaccggagatgagattgagcaggcg
ctgaaagagttcacagattcaatagttggagtgaacgtcgaagcttcagagaacagcaaa
ccgattaaacacctcgttgaaaagaagagcagtctaataaacgacttctggagaatccac
atgaaaactaggaagtgtccttactgcaggagcgggcgctttacagtacgtcgtgaacac
aacagtaaactgattgtcacgatgccgtcaggagcacagactgacagtactaacgaggac
ctggtagctggaaagagagtctacctgactgccagtacagccagagaacacaccaacaaa
ctgtgggagaaagaaggtttcttcctcaagtgtctgttctccgggctggaggagggatca
gagttgatggagggagaaaaagttttctatcctgacctcttcttcctggagctgctggtg
gtcccaccttgcaggtatcgtccaatcaatcgactgggtgaccagatgtttactaatgga
cagacagtcaacatgcaggctgttatgaaggactgtggaatcataaggaaacttctggct
ctcatagcgggcgagaaaaccactcaggaggaagaggcagaggctcctgaacagacagac
cagtcctttctgtccgggattccaggagtgacattaacagataaactctacaacatctgg
atccgcctccaaactcacgttaacatcgtttttgacagcgacatggacaaaatgatgaca
gagaaataccctggaatcagacagatcctggagaagaaggacggattgttccggaaacac
atgatgggcaaacgagtggactacgctgcacgatctgtcatctgtccagacatgtacata
gggaccaacgagataggaatacctatggtgtttgccaccaaactgacctacccgcagcct
gtcactccatggaacgtgaaggagcttcgtcaggccgtccttaacgggcctaacgtccac
cccggtgcttccatggtgataaatgaggatggcaggagaaccatcctatcacctaccaat
cttgcacagagagaagcagttgccaagcaactgctgacgccgtgtcctggtgtacagaag
atgcccatgaagatagtaaatcgacatattaagaacggagacgttttgttattgaacaga
caaccaactctgcacagaccctcaatacaagcccactctgctcgcatcttacctggagag
aaggtattaaggctccactatgccaactgcaaggcgtacaatgccgactttgacggagat
gagatgaacgctcatttccctcagagtgaactgggcagagcagaggcctacatgttagtc
agcaccgaccagcagtacctcgtccccaaggatggtaaacctttagcaggtctgatccag
gaccacatggtttcgggtacgaggatgacgatacgaggctgtttcttcaccagagaccag
tacaccgagctggtgtacagaggactgactgacaaaccaggcagagttaaactgctgcca
ccggccatatttaaaccacagccactgtggacaggaaagcaggtggtgtccaccctcctg
ctgaatgtaatcccacagaaagcagtacctctcaacctggttggcaaatcaaaaatcccc
agcaaagcatggatccaagaaccaccacgagccgctccaggatacagacctgacagcatg
tgtgactcacaggtggtgattcgtcagggggagctgttagtgggggttctggacaaagct
cactatggctcctcagtctacggtctggtccactgctgctatgagctgtacggaggggag
accagtggcaaactgctcagctgtctggcccgactcttcactgcctacctgcagttatac
agaggcttcactctgggtgtggaggacatcctggtgaaacagggtgccaaccggcagagg
aaaaagattattcaagaatcactgaagatcggcaccaaagctctccaagcagcatttaac
ttgccctccaacgtggatcaggcggacgctcagagccgctggcaggatgctcacctcaac
ccagaccagagagacttcagcatggctgaccacaagttcaaagaagtggccaaccaagtg
aataatgaaattaacaaggtgtgtatgccagtcggcctccacacctctttcccagacaac
aacctccaactgatggtccaatcaggagccaagggttctacagttaacaccatgcagatc
tcatgtctactaggccagatcgagttggagggtcgtaggcctccactgatgccttctggg
aaatcattgccgtgtttccagccatatgacccggcgcccggtgctgggggcttcgtttct
ggaaggtttctcacgggcatcaaaccacaggagtttttcttccattgtatggctggcaga
gaaggactggtggacacagctgtgaaaacatctagatcaggatatctgcagagatgtgtt
attaagcatctggagggtttggtagtacaatatgatcttacggtgagggacagcgacgga
tctgtggttcagttcctgtacggtgaagacgggctggatatccccaagactcagttcctg
cagccaagacagttccccttcatagaagacaactatgaggtcatcaagaggtctcagggc
ctggatgatgttttggcacgtttggaccctcagactgccagtaaacattttgcggccatc
cagcgctggagaacaaagagagaggtggcatctccacgcagaggagcattcctgttgttt
tcccagaagaagttggctaaactaaaacagactgaactaacagcagagccagatgcctat
ggcagagatgctgctatactgcagctggtacagcagtggcattctctggatgaagccagc
aggtcaaaatacagcagaaagtcctcccgctgccccgagccctccctgggcgtgtttagg
cccgacgtctgcttcggatcagtatctgaaaactttcacagcatcacagagaaatacctg
cagaacaggacgggtacagacagcctggacacccacagccttcgccagctgttgcactat
aagtggcagcgttcgctatgtgatcccggggaagcggtgggtctgctggcagcgcagtcc
atcggtgagccctccacccagatgaccctcaacaccttccacttcgccggcagaggagag
atgaacgtcactctgggaatacctcgactgagggagatcctgatggtggccagctccaac
atcaagactcccatgatgagcgttccagtgctgaacaacaagaaggccttgaagagagcc
aagacgctccgcaagaaactcaccagggtctgtctggctgaggttctgcagaaagttgat
gtggtagagactttgcggatcgagagcggctctcaccaaaagttgcggacgttcaaagtc
gccttccacttcctgcctcctgaccgttactgtgacgataagctgctatcgccccaacag
atcctccactacatggaaactaggtttttccgtcttctcctggaagccattaagaagcgc
agcgccaagctggcctccatcgccgtggagacgaggaaggccacccccagagataaggac
cacgacggcgagggaacggctgacacagcgggggcagacgacggagagggagaggaggag
agagagatcgtggatgaccaggggaacgaaggagacgccgacgcatcagacgccaagcga
aaagacaaacaggaagaggaggtggactatgagagcgaggaggaggaaggaggaggcgat
gacggtgaagataaagaagatctgggagaagaggaagaggaggcgcaggagaacgtggaa
aacggcagtctggaggagtcccagtcggagtcggcgggagtgagagcggagaggagaaag
aagcgagcgaggagaacgggaggaggagaagaatccctgaatcagatgagagtcaactcc
gtactagagtccaacccggcgatagagagatactgttacgattaccagcacgaactctgg
tgtgaggtggagctggtcttaccggtgagcaaggtgcattttgacctgacgtcagtcctg
tcgacgctggctcagaacgccgtcatcatggaaaccaagggcctgactcgttgcctgctg
agcgaaaacacaacaaagaccggagaaaaagagacggtcctcaacactgagggaatcaac
atgcatgaaatgttcaaacacagtgatatcttggacatcaacaggctgtactccaacgag
gtccacgccatggctaacacctacgggatcgaagtggctttaaaagtcatagagaaggag
atcaaagacgtctttgcggtctatggtattgaggtggatcccagacatctgtcgctggta
gcggactatatgtgtttcgaaggtgtatataagccattaaaccgacacgccatccggtcc
aactcctctccactgcagcagatgacctttgagaccagctataaattcctcaaacaggct
accatgctgggctcacacgatgagctggtttcgccgtcagcctgtctggtcgttgggaag
gtagtcaaaggtggaacaggactgtttgaactcaaacaaccgttgcagtaa
DBGET
integrated database retrieval system
