Thunnus thynnus (Atlantic bluefin tuna): 137189009
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Entry
137189009 CDS
T11154
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04120
Ubiquitin mediated proteolysis
tty04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137189009 (syvn1)
04120 Ubiquitin mediated proteolysis
137189009 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tty04121
]
137189009 (syvn1)
Enzymes [BR:
tty01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137189009 (syvn1)
Ubiquitin system [BR:
tty04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137189009 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
zf-RING_Vps41
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
137189009
NCBI-ProteinID:
XP_067454733
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All DBs
Position
9:complement(8344409..8352923)
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AA seq
635 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHFRVLSLMALLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYVLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNNQTPAPAQAPPPAPAAPANA
PAAPPANVAPGMLPGFPPGIFPFWGPFPAVPPPAAAVAAPGATDAPQSSTEATQAAGTSQ
PTSSTADTAAAAAAAAAAAPGSTIPGFPFSFPPPPFPAAPWLPMPPPPPFVSSMPPPPPS
LSRLSEEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRAEGGA
GEASGTTHSASSPSADSSTESPRQEKDSTSSDQVSEATVSQPADSTSAGSDTDRKETMEE
GAEEEDGEPNTAELRRRRLRKLETSSSSSSPPPDN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagccttggtgaccgccaccagtctggcactgactggagccgtggtggca
cacgcttacttcctcaaacaccagttctacccgactgtggtctacctcaccaagagcagc
cccagcatggcggtgttgtacattcaagcctttgtgttggtgttcctgctgggaaagttc
atgaggaaggtcttttttggacagttaagggctgcagaaatggagcacctcatcgagcgc
tcctggtacgcggtgaccgagacgtgcctggcattcactgtgttcagggacgatttctcc
ccccgcttcgtcgccctcttcactcttctgctcttccttaagtgcttccattggctggct
gaggatcgggtggactttatggaacgaagtccaaacatatcctggatttttcacttcaga
gtattatctctcatggctctgctgggtgtcttggactttctgttcgtcaaccatgcctgt
cacagcatcattaccagaggagcctcagtccagcttgtttttggatttgagtatgccatc
ctgctgaccatggtgctgacaaccttcatcaagtacgtcctgcacactattgacctgcag
agtgaaaacccgtgggacaacaaggctgtctacatgctctatactgagctcttcacaggt
ttcatcaaagtgctcctgtacattgcttttatgacgatcatgataaaggtccacaccttc
cccttgtttgccatccgccccatgtatctggctatgaggcagtttaagaaagctgtaacg
gatgctataatgtctcgaagagccatccgcaacatgaatacactataccccgatgctact
cctgaagatctgcaggcctctgacaacgtctgcatcatctgtcgggaggaaatggtcaca
ggagccaagaaactaccctgtaatcacattttccactccagttgcttgcgctcctggttc
cagaggcagcagacctgtcccacctgtcgcatggacgtcctccgggcgtctaataataac
aatcagactccagccccagcacaggctccgccccctgctccagcagcccccgccaacgct
ccagcagccccgcctgccaacgtggctccaggcatgttacctggctttcctcctggtatt
ttccccttctggggtccctttcccgcagtgcctcctcctgctgcagcagtcgcagctcct
ggtgctactgacgctccacaaagcagcacagaagctacgcaggcagctggtaccagccag
cccacctcgtctactgcagacaccgctgctgcagcagctgctgcagcagctgctgctcca
gggtcaacaatcccaggattccccttctccttcccccctcctcccttccccgctgcacca
tggcttcccatgccaccacctcctccctttgtgtcatcgatgcctcctcctcctccgtct
ctgtcccgtctgtcagaggaggagctgagggagctggaggcagagggccgacggggcctc
gaggccagactccagtgtctccaaaacatccacaccctgctggacgccgccatgctcaac
atccaccactacctcagcaccgtcgccacactcactcctccgcgggctgagggcggcgct
ggagaagccagcgggacgacccactctgcttcatccccctcagctgatagtagcacagag
agtcccagacaggagaaggactctaccagctctgatcaagtgagtgaagctacagtctct
cagcctgccgactcgacttccgccggctcggacactgacagaaaagaaacgatggaggag
ggagcggaggaggaggacggagagccgaacaccgctgagctgaggcgtcgtcgccttcgc
aagctagagacgtcgtcgtcgtcgtcgtcaccccctcctgacaattga
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