Thunnus thynnus (Atlantic bluefin tuna): 137189206
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Entry
137189206 CDS
T11154
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
137189206 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tty01009
]
137189206 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tty04515
]
137189206 (pcdh20)
Protein phosphatases and associated proteins [BR:
tty01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137189206 (pcdh20)
Cell adhesion molecules [BR:
tty04515
]
Cadherins
Protocadherins
137189206 (pcdh20)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
MRP_L53
Motif
Other DBs
NCBI-GeneID:
137189206
NCBI-ProteinID:
XP_067455042
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Position
9:13157931..13161699
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AA seq
857 aa
AA seq
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MPVLFSKTLLLTAYFFSRQNLLFLVHLRQIMCGSVRFSIPEEQEPGILTGSLSKHFPPPY
QLLTQEYLWMDKNRGNFYTTEQKMDREALCPEETKAEECIILHNAIVGPSRDLIQFPVII
EDINDNAPHFENSEIHLRVSEDVTAGTSFLLDAKAHDRDIGRNGKVQYHLEGSGEFFSLT
VDEESFITLVVQTALDRETQEQYQMALVASDCGSDPLSATATLIVTVTDVNDNCPSFSSD
SPRSVTIPGDSPKNMVVAQVTATDPDSGPNAAIVYSLSPKVSEQAKKLFSLDSLTGYIRL
TQDLQSDNSEELVLKVLASGHHCPPADTQVTVTVLPKANQEPTIKIGFIAEHQNQTMVLP
ENQPPTVLAVLELEGDSSFKGSSLAIEGEVPFTLSLQNGKYLLSTSKPLDYEMKSEHHIS
VVVHRRSAEGSVIAPTRHVIRVLVVDVNDNAPQFLHSHYQLEVEENNQPGMSLLRVSASD
ADSGYNGRVTYRLDKHTSTIFNIDPATGQLSVSASLDREQQYVHILTVFARDSGSPTLES
VATVSIRVVDQNDNAPVFLTQHFIFFIPENVAQFAQVGRVGVTDPDEGKNGNTELHVVNN
SEPFVVDNTQGTLRTTTNLDRETEDRYELYLLARDHGYPVSLTSTARVTIFVEDINDNQP
KVILPNSNFSCLTVSPETMAGTMITKIYAIDEDSGLNSEITYTVVAQEPAHNGSPFRVDS
RSGNITLAQRLVGNNLGMHHLFIMVSDGGKPAPLHTTVWVNLLVNESMEPCQLDSAPTWT
GPADLLVQNLSKAPICEVEESATRYAQLTLLVGLGMLLASICLLVVTAVLYLKQRRRRPP
QKNEIPLRLKDKYYSDD
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgctgttttcaaagacattactcctcacagcttatttcttctctcgtcagaat
ctgctgtttttggtccatctcaggcagatcatgtgtggttccgtccggttttccatccca
gaggaacaggaacctggtattctgaccggttcacttagtaaacactttccacctccgtac
cagctcctgacccaggagtatctatggatggacaaaaacagggggaatttttacaccact
gagcaaaagatggatcgcgaggccctctgccctgaggagacaaaagctgaggaatgcatt
attctacacaatgctatcgtggggccctcaagagaccttatacagtttcctgtgatcata
gaggacatcaatgacaatgcgcctcattttgaaaacagtgaaatacacctgagggtgtct
gaggacgtgacagcgggaaccagtttcttattagacgccaaggctcatgacagggatatt
ggtcgtaatgggaaggtgcagtaccacctggaaggttctggtgagtttttcagtttaaca
gttgatgaggagtctttcatcaccctagttgtgcagacagctttggacagggagactcag
gagcagtatcagatggcgctagtggccagcgactgtggctcagaccctttaagtgctaca
gcaactttaatagtcacagtgacagatgttaacgacaactgtccaagctttagctctgat
agcccccgcagtgtcaccatccccggagattccccaaagaacatggtggttgctcaggtc
acagccacagacccagattcaggcccaaatgctgccattgtttattccctcagccccaaa
gtctctgagcaggccaaaaagctctttagccttgacagcctcacagggtacatcagacta
acacaagacctccagagtgacaactccgaggagctggtgttgaaagtgttagctagcggc
catcactgccccccagcagacactcaggtaaccgtaactgtgctccccaaggcaaaccaa
gagccaacaataaagatcgggttcatagcagagcatcaaaaccagactatggtgttacca
gaaaaccagccccccactgtcttagctgttttagagctggaaggtgacagcagctttaaa
ggctcatctcttgccatcgagggtgaagtgcctttcactttgagcctgcagaatggcaaa
tacctgctttccacatcaaagcccctagactacgagatgaaaagtgaacatcatatttct
gtggttgttcacagaagatcagctgaaggatctgtgatcgctcctactaggcatgtgatc
agggtgttggtggtagatgtcaacgacaatgctccacagttcctgcattctcactaccag
ctggaggtggaggaaaacaaccagccagggatgtcactgttgcgggtctcagcttcagat
gcagacagtggatataacggcagggtgacctacaggctggacaaacacacatctaccatc
tttaacattgaccctgcgacaggtcaactgtctgtgtcagcttctctggatagagaacag
cagtatgtacacatactgaccgtgtttgcacgagacagtggctctcctaccttggagtct
gtggcaacagtatccattcgtgtggtggaccagaatgacaatgcacctgtttttctaacc
caacatttcatcttcttcatccctgagaatgtagcacagtttgcccaggtggggagggta
ggggtgacagacccagacgaagggaagaatgggaacacagagttgcatgttgtaaacaac
agtgaaccttttgttgtggataacacccaggggacattacgcaccacaaccaacttggac
cgcgaaacagaggaccgctatgaactctatctgctggccagagatcatggttacccagtc
tctttgacttccactgccagggtaaccatctttgtggaggacatcaatgacaaccagcca
aaagtgatccttcccaacagcaacttctcatgcctgactgtctccccagagacgatggca
ggtaccatgataacaaagatctacgccatcgacgaggactcaggactgaattcagagata
acgtacactgttgtggcgcaagagccagcacacaacggcagccccttccgggtggattca
aggtcagggaacatcacattagctcagcgtttggtaggaaacaacctgggaatgcatcac
ctgtttatcatggtcagtgatggggggaaaccagctccacttcatactactgtctgggtt
aatctgctggtcaatgaaagcatggagccctgccaacttgacagtgcacccacctggaca
gggccagctgacttattggttcaaaatctctcaaaggcccccatctgtgaggtggaggag
agcgctactagatatgctcagctgacactgttagtaggcctgggaatgttgttggcatcc
atctgtttgctcgtggtgacagctgttttatacctgaaacagaggagaagacgtccacca
cagaaaaatgagattccactcaggctcaaagacaaatattactctgatgactaa
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