Thunnus thynnus (Atlantic bluefin tuna): 137189468
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Entry
137189468 CDS
T11154
Symbol
clp1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137189468 (clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137189468 (clp1)
Enzymes [BR:
tty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
137189468 (clp1)
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
137189468 (clp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
ATP_bind_1
TniB
MMR_HSR1
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
137189468
NCBI-ProteinID:
XP_067455457
LinkDB
All DBs
Position
9:17768460..17772404
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AA seq
441 aa
AA seq
DB search
MATEGAEKTSEDAPVPGKVSTRFDLEKETELRFEVEAGEAAEQVELELLTGMAEVFGSEL
NRNKKYTFGPGSKIAVFTWQGCSVNLYGKPEVSYVSKDTPMLLYLNTHAALEQMRKQAER
DNERGPRVMVVGPTDVGKSTVCRLLLSYAVRVGRRPTLVELDVGQSGVSVPGTVSALCIE
RPADVEEGFSVQAPLVYHFGSTTPGTNIKLYNKLTSCLAEVFSQRCEVNRKASVGGCIIN
TCGWVKGSGYQALVHCASAFEVDVVLVLDHERLYNELKRDLPHFVRVVLLPKSGGVVERS
KECRRDTRDEKIREYFYGFRGLSFYPFSYEVRFSDVRIYKIGAPSIPDSCLPLGMSQDDT
QLKLVPVTPGRDLTYHVLSVSSAEDGEEGARKGIVESPVCGFIVVTNVDTQAQVMKVLSP
APRPLPRHTLLIMDIRFMDMR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagagggtgcagaaaagacgagcgaggatgctccagtacctggaaaagtcagc
actaggtttgatctggagaaggagactgaactacggtttgaggtggaggcaggagaggct
gcagaacaagttgagctggagctcctcacaggaatggctgaggtctttggctcagagctg
aaccgcaacaagaagtacacatttggaccaggctccaagattgcagttttcacctggcaa
ggctgcagtgtgaatctttatgggaagccagaggtgtcttacgtgtccaaggatactccc
atgctgctctacttgaacacacacgctgccctggaacagatgagaaaacaggcagagcgg
gacaatgagagggggccgagggtgatggtggtgggacctactgatgtggggaagtcgacc
gtgtgccggctgcttctgagctatgctgtgagagtgggcaggaggcccacactggtggaa
ctggatgtcgggcagagtggggtgtctgtacctgggacagtgtcggcactgtgcattgag
cgtccagcagacgtggaggagggtttctcagtccaggctcctctggtctaccactttggc
tcaactacaccagggaccaacatcaaactgtacaataagctgacatcatgcctggccgag
gtgttttcccagcgctgtgaggtgaacaggaaggccagcgtgggcggctgtatcatcaat
acctgtggctgggtgaagggctctggataccaggctctggtccactgtgcatctgccttt
gaggtggatgtggtgctggtgctggaccatgagaggctctacaatgaactaaaaagggac
ctcccgcactttgtccgggttgtgctcttacccaagtctgggggggtggtggagcgctcc
aaggagtgccggcgggacactcgggatgagaagatccgagagtacttctacggcttccgt
ggattgtccttctaccctttctcctacgaagtgcgtttctctgatgtccgcatctacaag
attggggcaccatccatcccagactcgtgtctgccactgggaatgtctcaggatgacaca
cagctgaagcttgtgcccgtgacgccagggagagacctcacatatcatgtgctgagcgtg
agcagtgcagaggacggagaggaaggcgctagaaagggtatagtggagagtcctgtgtgc
ggctttattgtggtgactaatgtggacacacaagcacaggtgatgaaagtgctgtccccg
gcacccagaccactgccccgacacactctgcttatcatggacatccgtttcatggacatg
agatga
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integrated database retrieval system
