Thunnus thynnus (Atlantic bluefin tuna): 137189477
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Entry
137189477 CDS
T11154
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tty03000
]
137189477 (ssrp1a)
03036 Chromosome and associated proteins [BR:
tty03036
]
137189477 (ssrp1a)
Transcription factors [BR:
tty03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
137189477 (ssrp1a)
Chromosome and associated proteins [BR:
tty03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
137189477 (ssrp1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
Rttp106-like_middle
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
PDU_like
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
137189477
NCBI-ProteinID:
XP_067455469
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All DBs
Position
9:17866457..17880258
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AA seq
705 aa
AA seq
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MGDTLEFNEIYQEVKGSWNDGRLRFSKQNVVYKSSKTGKVDSIPAGELNLAQWRRVCLGH
GIKLSTSGGHVYKYDGFRDTDFEKISEFFKANYKLELTEKDMCVKGWNWGTAKFSGPLLS
FDINDNTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQADERQDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDISLTLNMSEEDVERRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEGMKGKIDEYSDSDDDQHDAYLERMKAEGKIREEGNDSDDSDSGSDES
FNPGEEDDDIAEEYDSKASASNSSDEGDESEDESAKKKKAKKAKVVKEKKEKKPRKEKKK
QKDTGGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLGKDEKEEWEGKA
GEAKRQYDKAKKEYNESGGGSSSVSKKDSRKSGGKKEEKKRKSAGGDKDRERGGGNESFK
SKEFIETSEESSSDSDHKSKSKRKKESDEEEEAVSTPASSEEESD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactctggagttcaacgagatttaccaggaggtgaaaggctcctggaatgac
ggccggctgcgtttcagcaagcagaatgtggtttataagagcagcaagacagggaaggtg
gacagcatcccagcgggtgagctcaacctggcccagtggagacgagtgtgtttaggtcac
ggcatcaaactgtccaccagcggaggacacgtctacaaatatgatggcttcagggacact
gactttgagaagatctctgagtttttcaaggcgaactacaagttggagctgacagagaaa
gacatgtgtgtgaagggctggaactggggaacagccaagttctcaggacctctgttatcg
ttcgacattaatgacaatacagcgttcgagatcccgctgtctaacgtgtcccagtgcgcc
acggggaagaatgaagtcactctggagtttcaccagaatgacgacactgaggtctcactc
atggaggtccggttctatgtcccacccagccaggctgatgaacggcaagaccccgtggag
gcgtttgcccagaacgtgctgtctaaggctgatgtgatccaggcaacaggagacgcagtg
tgtatcttcaaagagctgcagtgtcttacacccagaggaagatatgatatccgtatctac
ccgaccttccttcaccttcatggtaagacctttgactacaagattccttacactaccgtc
ctccgtctattcctgctgccacacaaggaccagaggcagatgttcttcgtgatcagtctg
gatcctcccatcaagcagggacagactcgttatcacttccttattctgctcttttccaaa
gaagaggacatcagcctcacactcaacatgagcgaggaggatgtcgagcgccgttttgag
ggcaaactcagtaagaacatgtcagggtctctctatgagatggtcagcagggtgatgaag
gccctggtcaaccgaaagatcaccgtgccaggaaacttccagggccactcgggggctcag
tgcatcacctgctcctacaaagcgtcgtcaggcctcctctaccccctggagaggggcttc
atctacgtccacaagccccctgtgcacctgcgctttgaggagatctcttgcgtcaacttt
gccagaggcaccaccacaacgcgttccttcgactttgagatcgagaccaagcaggggaac
cagtacaccttcagcagcattgagagagaagagtacggcaaactgtttgactttgttaac
gccaagaagctcaacatcaagaacagagggttcaaagagggcatgaagggtaagattgac
gagtacagcgactcagacgacgaccagcatgatgcctacctggagaggatgaaggccgag
ggcaagatcagagaggagggcaatgacagcgacgattcggatagcggaagcgatgagtct
ttcaaccctggtgaagaagatgacgacattgcagaagagtacgacagcaaggcttcagcg
agtaacagcagcgacgaaggagacgaaagcgaagatgagagcgcaaagaagaagaaggca
aagaaagccaaagtggtgaaggagaagaaggaaaagaaaccacgcaaagagaagaagaag
cagaaagataccggaggccccaagaggccaatgagtgcctacatgctgtggctcaactcc
agtcgcgagcgaatcaagtcggagaaccctggtatctccatcacagagatctccaagaag
gctggagaaatgtggagacaactgggcaaagatgagaaggaggagtgggaaggaaaggca
ggagaggcgaagaggcagtatgacaaagcgaagaaagagtacaacgagagcggtggagga
tcatcctccgtttccaagaaggacagcaggaagtctggaggtaaaaaggaggagaagaag
aggaagtctgccggaggagacaaggaccgggagcgaggaggaggcaacgaaagcttcaaa
agcaaagagttcatcgagaccagcgaggagagttcgtcagactcagaccacaagagcaag
tccaagaggaagaaggaatcagacgaggaggaagaggctgtatccacacccgccagctca
gaggaagagtctgactaa
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