Thunnus thynnus (Atlantic bluefin tuna): 137189508
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Entry
137189508 CDS
T11154
Symbol
pcdh11
Name
(RefSeq) protocadherin-11 X-linked
KO
K16498
protocadherin delta 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
137189508 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tty01009
]
137189508 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tty04515
]
137189508 (pcdh11)
Protein phosphatases and associated proteins [BR:
tty01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137189508 (pcdh11)
Cell adhesion molecules [BR:
tty04515
]
Cadherins
Protocadherins
137189508 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
DUF6377
Motif
Other DBs
NCBI-GeneID:
137189508
NCBI-ProteinID:
XP_067455514
LinkDB
All DBs
Position
9:complement(18448591..18471981)
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AA seq
1043 aa
AA seq
DB search
MDLASQAHVLVVLLTCVVLLCLAQEKDYTVKEEQPENVRIGNLRKDVDLNLDPNIRLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGVFAEKRCYYEIEVAVLPDEIF
RLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGNPPKSSTAILQVTIS
DVNDNRPIFKDSEVEVTVPENAPMGTSVVQLHATDADLGSNAQIHFAFSNQISASTKRHF
AIDSSTGLITVKQPLDRELTPVHKLIVLASDGSSTPSRATVIVNVTDVNDNVPSIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENND
PSTQLIKISATDADSGHNAEIIYTLGPDAPDGFNIDRRSGILSVGKRLDREKQERYSFTV
IARDNGSTSLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNAVITLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAVDGGQPPSSSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSIISSII
ITSRVSPRGLFTIDKTTGNVTLQEKIVAADQGLHRLVVKVKDLGQPESLHAIALIHLFVN
DTVSNATFIQEQLRKSMETPLDRNIGDSEVTPQANGYVIVVIAIIAGTMTVILVIFVTAL
VRCRQTPRHKVVQKGKQSGEWVSPNQENRQIKKKKKRKKRSPKNLLLNFVTIDESKPDDP
THEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPV
APKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECSCQGGFKTAGQITTRQETAL
KPPHYGTLCGTGTTRSHRIKINL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggacttagcaagtcaggctcatgtgctggtggtcttgctcacctgcgtggtcttgcta
tgcctggcccaggagaaggactacacggtgaaagaggagcagccagagaacgtccgcatt
gggaacctgcgcaaggatgtggacctcaacctagaccccaacattaggctatcctcgccg
ctgcagttcaagcctgtgtacaagacaggtgacgtgcctttggtgagggtggaggccaac
acgggggagatctttaccaccaatcacagaatcgatcgggagaagctgtgctcaggtgtc
ttcgctgagaaacgctgctactatgagattgaggtggccgtgctgcccgatgagatattc
cgattggtcaagatccgcttcctgatagaggatgtgaatgacaacgcaccccttttccag
tccactgtaataaacatctccatcccagagaacacagccatcaacacccgatacccggtg
ccctcagcatttgaccctgatgtagggatcaatgggatccaacattatgaactagtcaag
agtgtcagcgagtttggcttagacatcattgagactcctgagggtgacaagtggccgcag
ctaatcgttcagcagaacctggatcgtgagcagaaggacacctttgtcatgaagataaaa
gtggaggacggtggcaaccctcccaagtccagcactgccattctccaagtcaccatctct
gatgtcaatgacaatcgtcccatcttcaaggacagtgaggtggaggtcacagtaccagag
aatgctcccatggggacatcagttgttcagcttcatgccacggacgcagaccttggttcc
aatgcacagatccacttcgccttcagcaaccagatctctgcctcaacaaaacgtcacttt
gccattgacagctctacaggactgatcactgtgaagcagccgctggacagggaactaaca
cctgttcacaaactcatcgttctggccagcgatggcagctccaccccctccagagccaca
gtgattgttaatgtaacagacgttaatgacaatgttccctccatagacactcgctacatt
atcaacctggttaatgggactgttctgctgtctgagaatgcgcctctcaacaccaaaata
gccctaattactgttactgacaaggatgcagatctttatggcaaagtagcttgctacact
gaccatgatgttccttttcggttgaagcccgtctttaatgatcaattcttactagagaca
gctgcccccctagattatgagacgactcgagaatatgcaattaagatagtggcctcggat
agggggacgcctcctttgaacacttcagctatggttttaattaaaatcaaggatgagaac
gacaatgcacccatcttcccccagccggaaatccaactttccataccggagaacaatgac
ccttctacacagttaataaaaatcagcgctactgatgcagacagtggacataatgctgag
atcatttatactctcggccctgatgcgcctgatgggtttaacatagacagacggtcagga
atcctctctgttggcaaacgactggacagagagaagcaggagaggtactcattcactgtc
atagcgagggacaatggttccacatccctgcagagcaatgtcactgtcaggctaatcgtc
caggaccttaatgacaacagcccagctttcacacaccctgagtacaacttctatgtgcct
gagaacctgcctctctatggaactgtgggcttaatcacagtaacggatgcagatgcagga
gataatgctgttataaccttgtccattttgaacgggaaagataatttcatcatcgatccc
caaaccggtgtgatcaaacccaatatcacctttgatagggagcagcaaagctcctacaca
tttatggtcaaggcagttgatggagggcagcctccgagctcctcctatgccaaggtcact
ataaatgtagtcgatgtgaacgacaatcgccctgtgttcgtcatcccatcctccaattac
tcatatgacctagtgcggaccaccaccacccctggagctgtggtcacaagagtgtttgcc
attgacaatgacactggtatgaatgctgagctgcagtatagtattatcagcagcatcatc
ataacatctagggtctcccctcgaggtctcttcaccatcgacaaaacaacgggtaacgta
acactgcaggagaaaattgtggcagctgatcaggggctgcataggctggtcgtcaaggtc
aaagatctaggccagcctgagtcattacatgctattgcacttattcacttgtttgtcaat
gacactgtgtcaaatgctacctttattcaagagcagcttcgaaaaagtatggagacaccc
ttggaccgtaacataggggacagtgaggtaacacctcaagccaacggatatgtgattgtt
gtcatagctatcatagcagggaccatgactgtcatcttggtgatatttgtgactgccttg
gtgcgctgccggcagacacccagacacaaagtggtacagaagggcaagcagagtggtgag
tgggtgtcacccaaccaagagaaccgtcagatcaagaagaagaagaagagaaagaagcga
tcccccaagaacctcctcctgaactttgtgaccatagatgaatccaagcctgacgacccc
acccatgagcatgttaatggtacactggatctccctgtggagctagaggagcaaaccatg
gggaagtacaactgggccaccacgcccaccaccttcaaacccgacagcccagacttagcc
aagcattacaagtctgcgtcccctcagcctacatttcaaatcaaaccggagactccagtg
gccccaaagaaacaccatgtgatccaggaactccccttggacaacacattcgtggtgggc
tgtgactcactctccaagtgctcatcgactagctccgacccatacagtgtctcagagtgc
agctgtcaggggggattcaagactgcggggcaaatcaccacccgacaggagacggcactg
aaaccaccacactatggcacactctgtggcacaggtacaactcgctcccacaggattaaa
atcaatctctag
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integrated database retrieval system
