Thunnus thynnus (Atlantic bluefin tuna): 137189877
Help
Entry
137189877 CDS
T11154
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03013
Nucleocytoplasmic transport
tty03015
mRNA surveillance pathway
tty03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137189877
09122 Translation
03013 Nucleocytoplasmic transport
137189877
03015 mRNA surveillance pathway
137189877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137189877
03041 Spliceosome [BR:
tty03041
]
137189877
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
137189877
Spliceosome [BR:
tty03041
]
Common components
Common spliceosomal components
Cap binding complex
137189877
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
WIT1_2_N
Importin_rep_6
DUF1690
Vfa1
AAA_11
AAA_13
tRNA_bind_2
FapA
DUF1664
Motif
Other DBs
NCBI-GeneID:
137189877
NCBI-ProteinID:
XP_067456090
LinkDB
All DBs
Position
9:29516080..29527634
Genome browser
AA seq
795 aa
AA seq
DB search
MSRRRHSDENDGGQAHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKNKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNNL
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRSDWFVYVVLSCLPWV
GKELYEKKDVEMDRLLSQIEGYLKRRVKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMPDAQYPMPRVVFRMFDYTDAPEG
PVMPGSHSVERFVIEENLHCIIKTHWKERKTCAAQLLSYPGKNKIPLNYHIVEVIFGELF
QLPIPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCIDRLINWFSHH
LSNFQFRWSWDDWADCLTMDLEKPKPKFVKEVLEKSMRLSYHQRIVDIVPPTFSALIPAE
PIFTYKYADESASLLPGYPVSITVGNAIKNRASNEEILTILKEVPNPNQEDDDDEGESFN
PVKIDVFLQTLLHLAAKSFSHSFSALGKFHEILKTLTYSDEGKLHILKVVYEVWRNHPQM
IAVLVDKMVRTQIVDCAAVANWLFSQDMAHEFTRLFIWEILHSTIRKMNKHVQKIQKELE
EAKDKLEKQQHKRRDSGDDEDMDKNSEDEDGQLEEQIERLQEKVESAQSEQKNLFLVIFQ
RFIMLLTEHLVRCETGSVDISTPWYKNCIERLQQIFLMHHVTIQQYMGTLENLLFTAELD
HHILAVYQQFCALQL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggagacgacacagcgacgagaatgacggaggtcaggcccacaaaaggaggaga
acctcggagcccatcgagattgaagatcgcctggagtctctgatatgtcgtgtgggcgag
aagagtacgtcgtccctggagagcaacttggagggtctcgctggcgttctggaggcggac
cttccaaactacaaaaacaaaatccttcgcattttatgtgctgtcgcccgcctcctccct
gagaagttgacggtctatacaactttagtcggactcctcaacgccaggaattacaacttc
gggggcgagtttgtggaagcaatgatcagacaactcaaggagacgttgaaaaacaacttg
tacaatgaagctgtttacttggtgcgttttctgtcggatttggtcaactgccatgtgatt
gctgctccctctatggtggccatgtttgaaaactttgtcagtgttactcaggaggaagat
gtaccacaggttcggtcggactggtttgtgtacgtggtgctgtcctgtctgccctgggtc
ggtaaggagctttacgagaaaaaggacgtggagatggaccgactgctcagccagatcgaa
ggctacctcaagaggagagtaaagactcatgttccaatgctgcaggtgtggacagctgag
aagcctcacccacaagaggagtacctggactgcctttgggcccagattcagaagctaaag
aaagaccgctggcaggagcgccacatccttcgtccatacatcgccttcgacagcgtgctg
tgtgaagccctgcaacacaacctgccccccttcacccctccgggacacatgccagacgcc
cagtaccccatgccccgggtcgtcttccgcatgttcgactacactgacgccccagagggt
cccgttatgcccggcagtcattctgtggagagatttgtcatagaagaaaacctgcactgt
atcatcaagactcactggaaagagaggaaaacctgcgctgcccagttactcagctatcca
gggaaaaataagattcctctcaactatcacatcgtggaggtgatctttggagaacttttc
cagttgcccatccctcctcacatcgacgtcatgtacaccactttgcttattgaactctgc
aaactgcagccgggatcgttgcctcaagttttggctcaagccacagagatgctgtacatg
agactggacaccatgaacaccacctgcatagacagacttatcaactggttttctcatcat
ttgagcaacttccagtttcgatggagctgggacgactgggctgactgcttgaccatggat
ctagagaaacccaaacccaagtttgtcaaagaggttctggagaagtctatgagactttcg
taccatcagcggatagtggacatcgtccctcccaccttctcagccctcatcccagctgaa
cccatcttcacttacaaatatgcagatgaaagcgcctctttgttaccaggttacccagta
tccatcaccgtcggtaacgccatcaagaaccgagcatccaacgaagagatcctgaccatc
ctcaaagaagtgcccaaccccaaccaggaagacgacgacgacgagggggagagtttcaac
cccgtgaagatcgacgtgttcttgcagactcttctccatctggcagccaaatccttcagc
cactccttcagcgccctcggcaagtttcatgaaatcttgaagaccctgacgtacagcgac
gaggggaagctgcacatcctcaaagtggtttatgaagtgtggaggaaccacccgcagatg
atcgctgtgttggtggacaaaatggttcggacgcagatcgtcgactgtgctgctgtggcc
aactggctcttctctcaggacatggctcatgagttcaccagacttttcatctgggagatt
ctgcactcgaccatccgtaagatgaacaaacacgtccagaagatccagaaggagctggag
gaggccaaggacaagctggagaaacagcagcataagaggagggacagcggagacgacgag
gacatggacaagaacagcgaggatgaggacggtcagctggaggagcagatcgagaggcta
caggagaaggtggagtcggctcagagcgaacagaagaacctcttcctcgtcatcttccag
cgtttcatcatgttattgacggagcatctcgtccgctgcgagacgggcagcgtcgacatc
agcacgccatggtacaaaaactgcatcgagcggctgcagcagatcttcctcatgcatcac
gtgaccatccagcagtacatgggaaccctggagaacctgctgttcaccgccgagctcgac
caccacatcctggccgtctaccagcagttctgtgccctgcagctctga
DBGET
integrated database retrieval system
