Thunnus thynnus (Atlantic bluefin tuna): 137190980
Help
Entry
137190980 CDS
T11154
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04010
MAPK signaling pathway
tty04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
137190980 (cacna1ba)
04020 Calcium signaling pathway
137190980 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tty04040
]
137190980 (cacna1ba)
Ion channels [BR:
tty04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
137190980 (cacna1ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
CATSPERB_C
Motif
Other DBs
NCBI-GeneID:
137190980
NCBI-ProteinID:
XP_067456853
LinkDB
All DBs
Position
2:complement(5842172..5990906)
Genome browser
AA seq
2398 aa
AA seq
DB search
MARFEDELSSRYGGSCPTGPARGAIRQPGPPGVQRMYKQTMAQRARTMAIYNPIPVKQNC
LTVNRSLFIFSEDNIIRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPALDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGADFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGK
FHRTCFRTDTGEQAAEFPCGLEAPARTCSNGTACKEYWTGPNFGITNFDNILFAVLTVFQ
CITMEGWVEILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKSLDGAWYKRKHNNSVLKRA
KKSKNDLINAEEGEDHFTDISSVAPPGSPFARASVKSKNENSSYFRRKEKRIRFTIRRLV
KSQSFYWTVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLAEMSMKMYGLGPQ
NYFHSSFNCFDFGVIIGSIFEVIWAAIKPGASFGISVLRALRLLRIFKVTKYWNSLRNLV
VSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQI
LTGEDWNAVMYHGIESQGGVHGGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELT
KDEEEQEEAINKKLALQKAKEVKEVSPMSAANMSITAFLTRSRGNAHSSSSSICSVNSLS
YVCTPVHHYLSKEQQKSMKTMSVWEQRANQLRRQNRASCEALYSELDPEERLRLATALHI
RPDMKTHSDRPLVVEPGDGPLLGGHQHHRHKSCMSDEAETAADPPPPPLPPQPRRHHRHR
TRTREETNDNGETSREGRHHVHHSRSKDHDGSRGKEGKSERSRSQEGGRRHQSSVDDSGG
GGVTSEREHRHHHSHRPSQEGNGTVNSGGRGERRSRHKDGRSSNKAEDRISRGDGGASGE
RRRHRTHGSRGQSTAEGEEANERVKTHSHRFGDSEGESLAIPPQQGSVEPNWTLDRPEDS
DNQRNVRRTGQSSIQIPPVTITSPPGETTLIQLNSIDCETMPMNEKTLEDLGQSGPKPIL
PYSSMFIFGQTNPVRRLCHYIVTMRYFEMSILVVIAMSSIALAAEDPVWTNAPRNNVLKY
LDYAFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDIS
TIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFK
GKFFYCTDESKGLEKDCKGQFLDYDKEEVAAMPREWKKYEFHYDNVLWAFLTLFTVSTGE
GWPTVLKHSVDATFEDQGPSPGYRIEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDK
ALSECSLEKNERACIDFAINAKPLTRYMPENTQSFQYRMWKFVVSAPFEYSIMIMIALNT
VVLMMKFHGAPDFYEAMLKNLNIVFTTLFSLECILKIIAFGPLNYLKDAWNVFDFVTVLG
SITDILVTEINTTDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLL
IAMLFFIYAIIGMQVFGNIDLNEDTAINHHNNFRTFLQALMLLFRSATGEAWHEIMLSCL
SHRPCDERSGTHGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGP
HHLDEFIRVWAEYDPAACGRITYKDMYNLLRIISPPLGLGKNCPNRVAYKRLVKMNMPIA
DDNTVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKELSTVWPNLSQKTMDLLVTPH
KPNELTVGKVYAALMIFDYYKQNRARRLQQQQQESASGSQCKVRALFKPLLPLTHMQEND
PPMMSNSVEPLSVLQPQPESQAKPQPQTRPSSNSLNNGGTLPGHEHNIKGSSSWVMEKPI
EGSRAKAMQNLSRGPSEDTPDTAVIQESVEMKKMETSASSTIAVPGSGLENQGRAASMPR
LNAELQRSHSRHSPGIHLASVPDASPMKRSASTVAPQRPQEVNLRDYTLEKPSQDRPHHH
HHHHRCHHRRDKDRDRDKDRDREKRQRSLDTPLGGQPPSSAGAPGEAVPDPVTSRERAHD
RGRSHERKHHHSSVDKQRYYSCDRYCSREHCHTKSATASCAASPSEAQETSNKQGSGWVK
GSPVALSSSSSTPSRGRRQLPQTPLTPRPGVAYKTANSSPVHFVSSQASLSPGRLSRGLS
EHNALRHSGSRHFPCPVTRISSEPFLGRGHGEALGSPYSSLRDQLDVFQDAASLSPSPRT
GRSSRTALPRMMGALLPAPQQNLGVPNGYHFSFGGSTSPGSGVRAPRYYQEAEEDEWC
NT seq
7197 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctttgaagacgaactgtccagccgctatggaggcagctgtcccacgggcccg
gccagaggggccatccggcagccggggcctccgggggtccagaggatgtacaagcagacg
atggcccagagagccaggaccatggccatttacaaccccatcccagtcaaacagaactgc
ctcaccgttaaccgctctctgttcatcttcagtgaggataatatcatacggaaatatgcg
aaaaagatcaccgaatggcctccatttgagtacatgatcctggccaccattatagcaaac
tgcatcgtgctggccttggagcaacacctaccggccttagacaaaacaccgatgtcagag
cgtttggacgacacagagccctactttattggaatattttgttttgaggctggcatcaag
atcatcgccctgggctttgcctttcacaaaggctcctacctgcgtaatggctggaatgta
atggactttgtggtggtcctaacagggatcctggccactgtgggagctgattttgacctg
agaacactgagagcggtgagagtgctgcggccgctcaagctggtctctggcattcccagt
cttcaggtggtgttgaagtccattatgaaagccatggtacctctgctgcaaatcggcctg
ctgctcttcttcgccatcctcatgttcgccatcatcggcctcgacttctacatgggcaag
ttccatcgcacttgcttcaggacagacacaggcgagcaagcagcagagttcccctgtggc
ctggaggctccggcaaggacctgcagcaacggcaccgcctgtaaggagtactggaccgga
cccaactttggcatcaccaactttgacaacatccttttcgctgttctcaccgttttccag
tgcatcaccatggagggatgggtggaaatcctctacaacgccaacgatgcctcagggaac
acgtggaactggctgtacttcatccccctcatcatcatcggttccttcttcatgctcaac
ctggtgctaggtgtgctgtcaggggagtttgccaaggagagagagagagtggagaagagg
caggaattcttgaagctccgcaggcagcagcaaatagagagagagttaaccgggtacctg
gagtggatctgcaaagcagaggaggtgatgctggctgaggaggataagaacgcggaggag
aaatccctggatggagcgtggtacaaaaggaaacacaacaactctgtgctgaaaagagcc
aagaagagtaagaacgacctcatcaatgcagaagaaggagaggaccacttcactgacatc
tcatctgttgcccccccagggtctccgttcgccagggccagtgtaaagagcaagaatgag
aactcatcttacttcaggagaaaagagaagaggattcgctttaccatccgccgtctggtc
aagtcccagagcttctactggactgtgttgtgtctggtcggcctcaacacgttgtgtgta
gccatcgtacactacgaccagcctgagtggctcacctatgcactatacctggctgagttt
gtgttcctgggcctgtttttggcagagatgtcaatgaaaatgtacggcctcggaccccag
aactacttccactcctcattcaactgttttgactttggggtgattatcggcagtattttt
gaggtaatctgggccgccatcaaacctggagcctcatttgggatcagtgtcctacgggct
ctgagactgctcaggatcttcaaagtcaccaagtactggaactctttgagaaacctggtt
gtatctctactcaattccatgaagtccatcatcagcctgttgttcctcctcttcctcttc
attgtggtcttcgctctgctgggcatgcagctgtttggtggacagtttaattttgaagac
gaaacgccgacaaccaactttgacacattcccagcagcgattctcactgtcttccagatc
ctgaccggggaagactggaacgcagtcatgtatcacgggatcgaatcacagggtggtgtc
catggaggaatgttctcctccatttatttcattgtactcactctctttggaaactacaca
ctcctcaacgtcttcttggccattgctgtcgataaccttgcaaatgcccaggagctcact
aaggatgaagaggaacaagaggaggccatcaataagaaacttgccctccagaaagccaag
gaagtaaaggaggtcagccccatgtcggccgctaacatgtccatcacagcttttctaaca
cgcagtcgaggtaacgcgcactctagcagctcatccatctgcagcgttaactcactgagt
tatgtctgcaccccagtccatcactacctgagtaaggagcagcagaagtctatgaagacg
atgtcggtgtgggagcagagggccaaccagctgagaaggcagaaccgcgcaagctgcgag
gccctatacagtgagctggaccctgaggaacgtctgcgcctagccacagccctccacatc
cggccagacatgaagacccacagcgaccgtccactggttgttgagcccggggatgggcct
ttgctaggtggccaccagcaccaccgtcacaagtcctgcatgtcagatgaggctgagact
gcggccgaccctcctcctcctcctctgcctccccagccccgtcgccaccaccgccacaga
accagaaccagggaggagacaaacgataatggcgaaaccagtagggaaggcaggcaccat
gtccatcacagccgctccaaagatcacgatggcagccggggcaaagaggggaagagtgag
aggtcccgcagccaagagggaggcaggaggcatcagagctcagtggatgacagcggaggt
ggaggagtcacgagtgagagagagcatcggcatcatcattcacaccggccgtctcaagag
ggcaacgggacagtgaacagtggagggaggggagagcgaagatcccgccacaaagatgga
cgttcatctaacaaggctgaggataggatttccagaggagacggcggggccagtggagag
aggaggagacatcggactcatggatccaggggccaatccacagctgaaggagaggaggcc
aatgaaagagtgaagactcatagtcacaggtttggtgactcagagggggagtctctagcc
atccccccacagcagggctctgtggagcctaactggactcttgaccgacccgaggactca
gacaaccagaggaacgtcagacgaaccggccaaagctccatccaaattccccctgtgacc
atcacatccccacctggagagaccacacttatacaattgaacagtatcgactgtgagacg
atgcctatgaacgagaagaccttggaggatctcggtcagagcggacccaaacccatcctg
ccttacagttctatgttcatctttggacagaccaatccggtgaggcggttatgtcactat
attgtgactatgcgttattttgagatgtccatcctggttgtcatcgctatgagcagtatc
gctttggcagcagaggatccagtctggacgaacgctcctcgcaacaacgtgctcaaatat
ctggactacgccttcaccggggttttcacttttgaaatggtgattaagatggtggacctg
ggcctgctgctccatcctggatcttacttcagagacctgtggaacattctagacttcata
gtggtcagtggggcgctggtggcttttgcattttcggggaccaaaggcaaagacatcagc
acgatcaagtctctgagggttctccgagtgctcaggcctctcaagactatcaaacgtctg
ccaaaactcaaggctgtgttcgactgtgtggtcaactccttgaagaatgtgctgaacatc
ctcatcgtttacatcctcttcatgttcatctttgccgtcatcgctgttcagctcttcaag
ggaaaattcttctactgcacagacgagtccaagggcttggagaaggactgcaaagggcag
ttcctagactatgacaaagaggaggtggctgctatgcccagagagtggaagaaatatgag
ttccattatgacaacgtgctgtgggccttcctcaccctcttcactgtgtccactggggag
ggctggccaacagtcttgaagcactctgttgatgccacctttgaagaccagggtcccagt
ccaggctaccggatagagatgtccatcttctatgtggtctactttgtggttttccctttt
ttctttgtcaacatcttcgtcgctctgatcatcatcaccttccaggagcagggagacaag
gccttgtctgaatgcagcttggaaaagaatgagagggcttgtattgactttgccatcaat
gccaagcctctgacacgctacatgccggagaacacccagtccttccagtacaggatgtgg
aagtttgtggtctcagctccatttgagtactccatcatgatcatgatcgccctcaacact
gtggtactgatgatgaagttccatggagctccagacttctatgaagccatgttgaagaac
ctcaacatcgtcttcaccactctcttctctctggagtgtatcctcaagatcattgctttt
ggtccactgaactacctaaaggacgcctggaacgtatttgactttgtgacggtgttgggt
agcatcactgacatcctggtcactgaaatcaatactacggacaggctgctcaacctgagc
ttcctgaggcttttcagagccgctcggctcatcaagctgctgaggcagggttacaccatc
cgcatcctgctgtggaccttcgtccagtccttcaaggccctgccttatgtttgcctgctg
attgctatgctgttcttcatttatgccatcattgggatgcaggtgtttggcaacattgat
ctgaatgaggatacagctatcaatcaccacaacaacttccgcactttcctccaggctctc
atgctgctgttcaggagtgcgacaggcgaggcatggcacgagatcatgttatcatgtctg
agtcatcgaccctgtgacgagcgatcagggacccatgggaaggagtgtggcagtgatttt
gcctacttctactttgtctcctttatcttcctctgctccttcctgatgctgaacctgttt
gtagcagtcataatggataactttgagtaccttaccagagactcctccatcctggggcct
catcaccttgatgagttcatccgggtctgggctgagtacgaccccgctgcgtgcggacgg
attacctataaggatatgtacaatttgttacgtattatctcacccccccttggcttagga
aagaactgccctaatagggtagcatacaagcgcctcgtcaaaatgaacatgcccatcgct
gatgacaacaccgtccacttcacctccaccctgatggccttgattcgcaccgccctggag
atcaaactggcctcaggtatggtggcccagcgattatctgacgctgagttaaagaaggag
ttgtccacagtgtggccaaacctctctcaaaagaccatggacctgctagtgacgccacat
aaacccaatgaactgacagtagggaaggtttatgcggccctgatgatcttcgattactac
aagcagaaccgagccaggaggctgcagcagcagcagcaagagagtgcgtcaggctcacag
tgcaaggttcgggctctgtttaagccattgctgcctctgactcacatgcaggagaatgac
ccgcctatgatgtcaaacagtgtggagcctctcagcgtgcttcagccccagcccgaatcc
caggccaagccccagccacagaccagacctagctccaactccctcaacaatggaggcact
ctgccaggtcatgagcacaacattaagggatcatcttcctgggtgatggagaaacccata
gaagggtcccgagctaaggcgatgcaaaacctgtccaggggcccatcagaggacacaccg
gacactgccgtcattcaggagtcggtagagatgaagaagatggagaccagtgccagcagt
acaattgcagttcctggctcaggtctggagaaccagggcagggctgcctctatgcctcga
ctcaatgctgagctgcagcggagccactcacgccactctccagggattcatctagcttct
gtccctgatgccagccccatgaagcgctctgcctccactgtggccccacagcgcccccag
gaggtcaacctgagggactacaccctggagaaacccagccaggacagaccccatcaccac
caccaccaccaccgctgccaccaccgcagagacaaagacagagacagagataaagacaga
gacagagagaagaggcagaggtctctggatacacctctgggtggacaacctcccagctct
gctggtgcaccaggagaggcagtgccagacccagttacctccagagagcgagcccacgac
cgcggacgctcccacgagaggaaacatcaccactcatcagtagacaagcagcgctactac
tcctgcgaccgctactgcagccgggaacactgccacaccaaatctgccaccgccagctgt
gccgcctcccccagcgaggcgcaggaaaccagcaacaagcagggcagtggttgggttaaa
ggcagcccagtggcactgagctccagttctagcacgccaagccgcggacgtcggcagctc
ccccagacccccctcaccccgcggcccggggtggcctacaagactgccaattcctccccc
gtgcactttgtgtccagccaggcctctctgagtcccggccggctgagtcgcggcctgtcg
gagcacaatgctctccgacacagcggctcccgccacttcccctgccctgtcactcgtatc
agctcggagcccttccttggccggggccacggcgaggccctgggcagcccgtatagcagc
ctccgggaccagctggacgtcttccaagatgctgcgtcactgtcgcccagcccccgtacc
ggacgctcatctcggaccgcactgcctcgcatgatgggagccctgcttcccgctccacag
cagaaccttggggtgcccaacgggtaccacttcagcttcgggggcagcaccagcccaggc
tctggcgtcagggcacccaggtattaccaggaggcagaggaggacgaatggtgctag
DBGET
integrated database retrieval system
