Thunnus thynnus (Atlantic bluefin tuna): 137191292
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Entry
137191292 CDS
T11154
Symbol
u2af2a
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2a isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137191292 (u2af2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tty03041
]
137191292 (u2af2a)
Spliceosome [BR:
tty03041
]
Complex A
U2 snRNP components
U2 related factors
137191292 (u2af2a)
Complex B
137191292 (u2af2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MUD2_C
RRM_occluded
DUF8489
RRM_7
Transformer
F07F6_N
Motif
Other DBs
NCBI-GeneID:
137191292
NCBI-ProteinID:
XP_067457374
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All DBs
Position
10:14584723..14599563
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AA seq
476 aa
AA seq
DB search
MSDFDEFERQLSENKQAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRDRRGDSKERR
HRRSSPSSYPQDNAGSRSPHREKKKKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATAL
LPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQA
PGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN
PSVYVPGTQPINGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSA
TGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKNATLTSINQTPVTLQ
VPGLNSSVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIEIPR
PVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcgacgaatttgaaagacagctgtctgaaaacaaacaagctgaaagggac
aaagagaaccgccaccaccgccgctcctcttcccgcagccgtagcagagagaggaaaagg
aggagcagagacagggatagacgcagcagggaccgccgtggggacagtaaggagcgcaga
cacagacgcagctcaccatccagctacccccaggacaatgctggaagtcgttctccgcat
cgtgagaagaagaagaaggtgaagaagtactgggatgttcccccgcctggttttgaacac
atcactcccatgcagtacaaagccatgcaagctgcaggccagattccagccacagccctc
ctgccaaccatgactccagatggcctggctgttactcccacccctgtacctgttgtgggc
agccagatgacccggcaggcccgccgactgtacgtgggaaacatccccttcgggatcaca
gaggagtccatgatggacttcttcaatgcccagatgcgtttgggtggtcttactcaggcc
cctggaaaccctgtccttgcagtacagatcaaccaggataagaattttgccttccttgag
ttccgctcagtggatgaaacaacacaggccatggcttttgatggcatcatctttcaaggc
cagagtcttaagattcgccgtccccatgattaccagcccctgcccggcatgagcgagaac
cccagtgtctatgtgcctggtacacagccaattaatggtgtggtgtccacagtggtgcct
gactcggctcataagctcttcattggtggcctgcccaactacttaaatgatgaccaggtg
aaggagctgttgacgtcttttggccccctgaaggcctttaacttggtgaaggacagcgct
acaggcctatctaaaggatatgccttttgtgaatatgttgatgtcaaccttaatgaccag
gctattgctgggctgaacggcatgcagctgggagacaagaagctcctggtgcagagagct
agtgtgggatccaagaacgccactctgacaagtataaaccagacccccgtgacgctgcag
gtgccaggtctgaatagctcagtgactcagatgggtggtctgcccaccgaggtgctgtgt
ctgatgaacatggtggcaccagaggagctgctggatgatgaagagtatgaggagatcgtg
gaggacgtcagggacgagtgcagcaagtacggccaagtcaagagcattgagatacctcga
cctgtggacggcctggaagtgcctgggaccggcaagatctttgtggagttcatgtcagtt
tttgactcccagaaagccatgcaggggctgacaggaaggaagttcgccaacagggtggtg
gtgaccaaatactgcgatccagacgcatatcaccgccgggacttctggtag
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