Thunnus thynnus (Atlantic bluefin tuna): 137191709
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Entry
137191709 CDS
T11154
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tty00535
]
137191709 (col14a1a)
Proteoglycans [BR:
tty00535
]
Extracellular matrix (ECM) proteoglycans
Others
137191709 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_3
DUF4959
Motif
Other DBs
NCBI-GeneID:
137191709
NCBI-ProteinID:
XP_067458126
LinkDB
All DBs
Position
10:20607192..20755472
Genome browser
AA seq
1782 aa
AA seq
DB search
MLSTGQIRWCLWAPLVLLALVSHFPSKAQGQVPSPRRLRFKVLSASKLLVSWKEPKGDFD
SYLFLYNSIPGGRQREIIVSKSDSKVLITDYNPSKDYIVSVIAVSSNQQSRPLKGRHKAE
RGESHGGDKTEPQRLTDSVVHPEDANEISGVDQFVCHTEAIADIVILVDGSWSIGRLNFR
LVRMFLENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNAFTTKDSVIDAVKNLPYKGGNT
LTGLALTYILENCFKPESGSRVGIPKIGILITDGKSQDDVIPPAESLRNAGIELFAIGVK
NADENELRSIASEPENTHVYNVADFNIMSSIVEGLTKTVCEQVELQDKDIKQKQTPEKIG
APLDLVTSEVTARSFRVTWSHSPGDVEKYRVVYYPAQGGEPQEAVVDGSETSVVLQHLSS
LTEYQLAVFAVYANEASEALRGSETTLALPTVTGLQLLDVTHSTIKARWDSVDGVSGYML
LYAPLTDGGDLDEKEVKVSDAVTELELDGLTPHTEYTVTVYAMYGEEASDPMTSQETTLP
LSPPSNLQFSDITHNSAHISWDPAPTGVKGYRIMWIKTDDQLSEEVEVGPVSSYDLSELT
SLMEYSVAIFALYDNGQSVPLGDGFTTTPVPGPLNLLSSDVSTNSFQVSWDHSANDIILY
RLSWAPFTGGDTNEVVLSGSDNRYILNGLNPSTEYEVMLTAVFKDDSESDTISVIETTLT
ETTTIAPTTAVARQAVRNLQLSDETTQSLEASWELEDPHVEIYRVSYAGVRSNHKEESVL
VPGDQRRAVLQPLLSDTQYKVTVTPVYTDGQDGISVSALGATLPLLSPGNIRVSEEWYNR
FRVTWDPPQSPAEGYRIVYQPIYVPGPVLETTVGEDLNSVLLLNLLSGTEYSVHVTASYP
TGQSEPLLVNAKTLFLGVSGLSTYQVHHNSMCVQWQPLLHATLYRVSIQSTLNSQRQEVS
LGGGASRQCFYDLTPSSQYQISVHTQMQEMEGPAVSITDMTLPAPTQAPTEPPPTEPPPT
IPPAKEVCKEAKADLAFLVDGSWSIGDDNFMKITRFLYSTMGSLDLIGPDGTQVAIAQFS
DDARTEFQLSSHGNKEALLEAIQRIRYKGGNTKTGRAIKHVKESIFTSEAGARRGVPKVL
VVLTDGRSQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDAV
KKIEEQLITFVCEAATATCPSVLMSGNTMTGFRMMEKFGLVEKEYSTIPGVSLEPGSFNS
YPCYRLHRDALVSQPTKYLHPEGLPSDYTISMMLRLLPETPQEPFALWEILNKDSEPLVG
LILDNSGKTLTFFNYDYKGDFQTVTFEGTEIKKIFHGSFHKLHVTISKTAVKVVLDCSVV
GEKGISAAGNITTDGVEILGRMVRSRGRRDNSAPFQLQMFDIICSTSWASRDKCCELPAL
RVEEQCPSMPHSCTCSQDSKGPPGPPGPPGGPGIRGSRGDRGEPGVTGPQGPMGEIGSLG
PPGPPGPQGPSGLSIQGPPGAAGEKGERGEIGPAGQMGVPGSPGSPGRDGPPGARGLPGN
NGPQGRQGPPGPIGSPGAPGASGPGGPSGAQGDQGLPGPAGTKGDKGERGDVQSQAAVRA
IARQVCEQLIQSHLSRYNSILNQIPVQSAVSVRTVPGPPGEPGRRGLPGPQGEQGPPGRP
GFPGTNGQNGRPGERGLLGEKGERGSPGVGSQGPRGPPGPPGLPGEGRTGSQGPTGRPGN
PGSPGRPGNPGTTGPAGPPGYCDQNSCLGYNVGVQQDYGNDY
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctacaggacagatcaggtggtgtttgtgggctccactggtgttactggcccta
gtttcccatttccccagtaaagcacagggtcaagttccatctccgaggaggcttcgtttc
aaagtgctgagtgcaagcaaactccttgtttcatggaaggagcccaaaggagactttgac
agctatctgttcctctacaacagcataccaggtggtcgtcagagggagatcatagtatct
aaatctgacagcaaggtgttgataacagactacaacccctctaaagactacatcgtcagt
gtcatcgctgtcagcagcaaccagcagagtagaccactgaagggtagacataaagctgaa
agaggtgagagtcatggaggagacaagactgaaccccagaggctgactgattcagttgta
catcctgaggatgccaacgagatctccggagttgatcagtttgtgtgccacactgaggcc
atagcagacattgtgatcctggtggacggctcctggagtattggtcggctcaacttccgg
ctggtccgcatgttcctggaaaacctggtcaatgcctttgatgttggtattgataagaca
aggataggtttggcccagtacagcggtgatccaaggatagagtggcatctaaatgctttc
actactaaagattctgtcattgatgctgtcaagaatcttccttacaaaggaggaaacact
ctcacaggacttgcattgacctatatcttggagaactgtttcaagcctgagtctggctca
cgggttggtataccaaagattgggatcctcatcacggacggaaagtctcaggatgatgtt
ataccacctgcagagagcctgcgaaatgcagggatcgagctgtttgctattggtgtaaag
aatgctgatgagaatgagctacgctccatcgcctccgaaccagaaaacactcatgtctat
aatgtggccgacttcaacatcatgagctccatcgtcgagggattgaccaaaacagtgtgt
gaacaagtggagctgcaagacaaggacatcaagcagaagcagacaccggagaagatcggg
gcgccacttgacctggtgacatcagaggttacggcccggagctttcgagttacatggagc
cactccccaggagacgtagagaaatacagagtggtttattaccctgcacagggaggagaa
ccacaggaggctgtagtagacggcagtgagacttcagtggtgctgcagcatctcagctct
ctcactgaataccagctggctgtgtttgctgtgtatgcaaacgaggcaagtgaagctctg
agaggatcagaaacaaccctggctcttcccacagtgacgggcctccagctgctggatgtg
actcacagcaccataaaagcaagatgggacagtgtggacggagtatctggctacatgttg
ctgtatgcacctcttacagatggtggagacttggatgaaaaagaggtcaaggtatcagat
gcggtgacagagctggagctggatgggctgacccctcacactgaatacactgtcactgtt
tatgctatgtatggagaggaggccagtgaccccatgacaagccaggaaactacattacca
ctaagccctcccagcaaccttcagttctctgacatcacccacaactccgcccacatcagc
tgggaccccgcacccacaggagtgaaaggttatcgtatcatgtggatcaagacagatgac
caactctcagaggaggtggaggtgggtccagtgagctcttatgacctcagtgagctgaca
tctctgatggagtactcagtggccatctttgctctgtatgacaatggccaatcggtaccg
ctcggtgatggattcactaccactccagttcctggtcctctgaatctcctctccagtgat
gtcagtacaaacagcttccaggtcagctgggatcactcagccaatgacatcatcctctac
agactctcctgggcaccgttcacaggtggcgatacaaacgaggtggtcttgagtggaagt
gataacagatacatcctgaatggtctgaatccctctactgagtatgaagttatgttgacg
gctgtattcaaagacgattcagagagtgacaccatctctgtcatcgagaccacattgacc
gagacaacaacgattgctcctacaaccgcagtggcacgtcaggcggtgagaaaccttcag
ctgagtgatgagaccacccagagtttagaggcgtcgtgggagctggaagacccccacgtg
gagatctacagggtgtcctacgccggcgtcaggagcaatcacaaagaggagtctgtgtta
gttcctggtgatcagaggagagcagtgctccagcctttactatcagacacccagtacaaa
gtgacagtcacaccagtctacactgacggacaagatggcatcagcgtttctgccttgggt
gccacattgcccttgttgtctcctggaaacatacgtgtgtcagaggagtggtacaaccgc
ttcagggtcacctgggaccctcctcagtctcccgctgagggttacaggatcgtctaccag
cccatctatgttccagggccagttttggagacaacagtgggtgaggatttgaactccgtg
ctcctccttaatctactgagtgggacggagtacagtgttcatgtgacggcttcctaccct
acaggacaaagtgaaccactgctagtgaatgctaagacattgttcctaggtgtctctggc
ttgtcaacctaccaggtgcatcacaatagcatgtgtgtccaatggcagcctcttctacat
gctacattatacagagtctccatacagtctacactgaatagccagaggcaggaagtgagc
ctaggaggtggggcttcccgacagtgcttctatgacctcactcccagcagccaataccag
atcagcgttcacacccagatgcaggaaatggagggccctgctgtctccatcactgacatg
acactgcccgcacccactcaggctccaactgaaccccctcccacagagccccctcccacc
atcccgcccgctaaagaagtgtgtaaggaggccaaggctgacctggcattcctggtcgat
ggctcctggtccatcggagatgacaacttcatgaagattacacgtttcctctatagcact
atgggatcattggatctgattggaccagacggcacccaggtggccattgctcagttcagt
gacgatgctcggacagaattccagctgagttcccatggaaacaaggaagcgctgctggaa
gctattcagaggatcagatataagggaggaaacaccaagacaggtcgagccatcaaacat
gtgaaagagtccattttcacttcagaggctggagccagacgcggagttcccaaggtcctg
gttgtcctcactgatggccgctcacaagatgatgtcaacaaagtctccaaagaaatgcag
atggagggctatatcatctttgcaattggcttcgcggatgcggattacggggaactggtg
aatatagccagtaagcccagtgatagacatgtcttctttgtggatgatttggacgctgtg
aagaaaatagaagagcagctcattaccttcgtctgcgaggctgccactgccacttgtcca
tctgtattgatgagtggtaacacaatgacaggtttccgcatgatggagaagtttggcctg
gtagagaaggagtacagcaccatacctggagtttctctggagccgggttcgttcaacagc
tacccctgttacaggttacaccgtgacgctctggtgtcacagcccaccaagtatcttcac
cctgaaggtttaccctccgactacaccatttctatgatgctccggctacttcctgagact
ccgcaggagccctttgcattgtgggaaatcctcaataaggacagcgagccattggtggga
ctgattctggacaactctggaaagaccttaacgttcttcaactatgactacaaaggagac
tttcagaccgtcacgtttgaaggaactgaaatcaaaaaaatcttccatggcagtttccac
aagctccatgtgaccatcagcaagacagctgtgaaggtggtgttagactgctctgtcgtt
ggggagaaaggcatcagtgcagctggtaacatcaccacggatggtgtggagatcctggga
cggatggtccggtccagaggccgacgggacaactctgctccattccagctccagatgttt
gatatcatctgcagcacatcctgggccagcagagataagtgctgtgaactgccagcattg
agagttgaagagcagtgtccttctatgcctcattcctgtacctgctcccaggacagcaag
ggacccccaggaccacccggacctcccggtggtccaggaataagaggatccagaggagac
agaggagagccaggagtgacgggacctcaagggccaatgggagagattggctctcttgga
cccccaggaccgcctggtcctcagggacccagcgggctctctattcagggcccaccgggt
gctgctggggagaagggagagagaggagagattggtccagccggacagatgggtgttcct
ggaagcccaggctcccctggcagagacggccccccgggagcgaggggtctaccgggtaat
aatggacctcagggacgacagggacctcctggacccattggatccccgggagcacctgga
gcttcaggaccaggtgggccatcaggggctcaaggggatcaaggacttcctggtcctgct
ggtaccaaaggagataagggagaaagaggtgatgtgcaatcccaagctgcggtgcgtgcc
atcgcacggcaagtgtgtgaacagctcatccagagccacttgtctcgctataactccatc
ctgaaccagatccctgtccagtctgcagtgtcagtccgaacagtacctggaccaccagga
gagccaggtcgaagaggccttccaggacctcagggagagcaaggccctcctggcagacca
ggtttccctggtaccaacggccagaatggacgaccgggagagagaggtctgctaggagag
aagggcgagagggggagtccaggtgttgggagtcagggacctcgaggaccgcctggacct
ccaggcttgccaggtgaaggacgaacaggcagccagggccctaccggtcggcctggtaac
ccggggtcaccgggtaggccggggaacccaggtaccaccggaccagctggcccaccagga
tactgtgaccagaactcatgtctgggatacaacgttggagttcaacaggactatgggaat
gattactga
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