Thunnus thynnus (Atlantic bluefin tuna): 137192365
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Entry
137192365 CDS
T11154
Symbol
pms1
Name
(RefSeq) PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tty03400
]
137192365 (pms1)
DNA repair and recombination proteins [BR:
tty03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
137192365 (pms1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HMG_box_2
HATPase_c
HMG_WDHD1
DUF1104
Motif
Other DBs
NCBI-GeneID:
137192365
NCBI-ProteinID:
XP_067459075
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All DBs
Position
11:7132583..7155217
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AA seq
908 aa
AA seq
DB search
MKQLSADTVRLLSSSQVITSVVNVVKELLENSLDAGASSIDVKLENYGLDRIEVRDNGQG
IKAADTAVMAVRHFTSKICSHEDLEQLETYGFRGEALGSVCAVAEVAVTTKTEDDDISTQ
YTLNCTGGIVSQKPSHLGQGTTVSVLKLFKNLPVRRQYYSSTKKCKEEVKKVQDLLIAYA
IIKPDLRLTLAHNKVVVWQKAKVVDHRSALLATLGPGTVANLLPCHHRQEQPEIFLDGFF
PKPGADYSSTSTSTPDKTFIFVNNRPVHQKDIMKLLRQHYNAQYPDDRNRYPTLMLKIVV
SPSSVDVNLTPDKTQVLLHNKEAVLTAVEALLVSLYGCQPSSDPPPGKQLSHETSSPSSP
LQTDASQPGGETSVERDVTPDDRGGDVLEDAPERCDAAPSTAGSTDVPLNSQTSNGSSSS
SIAEDWIVNQIPDGLESNFSLYDDETANTGSKSPESCEDNGVLDADTSKDGLSAEDWSRG
TALTDPVSGEPLQPVEIHQPSKHNHSDSDEIKSSSNKKVFNVITEKRAALTAYDLISNRV
MRAPLSPAALYEKEVRAEVLREKPTASLQDISVAVHERWKNLREEDRKKYEEKAKKHLEH
HNHKTKLASAEGPRETSASTPRGHAQGQKRKAPLSNQQLLDELFSAQPQKKMRNPAPKPS
QPLPCSVAALRLQLQRLSSQSSAAPRGLRLVNRLASQSAWVILCGQRLMLLNPFRVEEAL
LFKRLLENNILPAVSLQNPIQLTDGSLRGAEYVEALCNMKKQNPDLNGTMFISDPRIVAN
GFKIRLTPGLTSAERHLEVTAMADCVPFLGVEDLREILTAVLHRKASTVHECRPLKVTNY
LQGEAVRLARQLPSHLSREDVQETLQRMEQQLDENNRTCFHGRPFLQHLTDIPRTDEEAE
ALLKPLEL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagctgtctgctgacaccgtgcggctgctgtccagctcgcaggtcatcacttct
gtagtgaacgttgtgaaagaactgctggaaaactccctggacgctggagcttcaagcatt
gacgttaaactggagaactacggcttggaccggatagaagtacgtgacaacggccaagga
atcaaagctgctgatacggctgtgatggccgtgagacatttcacctcaaagatctgcagc
cacgaggatctggagcagctggagacgtacggcttccgaggagaggcgctgggctccgtc
tgcgccgttgccgaggttgccgtcactacgaagaccgaggacgatgacatcagcacccag
tacacactgaactgcacaggaggcatcgtctctcagaagccgtctcacttaggtcaagga
acaacagtgagcgtactgaagcttttcaagaatcttccagtgaggaggcagtactattcc
tccacaaagaagtgcaaggaggaagtgaagaaagtgcaggacctgctgatagcctacgcc
attataaaacctgacctgaggctcacgctcgctcacaataaggtggtggtttggcagaag
gccaaggtggtcgatcacagaagcgccctcctcgctacactggggcccggtactgttgcc
aacctgctcccttgccaccatcgccaggagcaaccagagatttttttagatggttttttt
ccgaagcctggagcagattactcctctacaagcacgtcgacacctgacaaaacattcata
ttcgtcaacaacaggcctgtccaccaaaaagatataatgaagctgttgcgtcaacactac
aacgctcagtatcccgacgaccgaaatcgatatcccaccctcatgcttaaaatcgttgtt
tcgccttcctcggtggacgtcaacctgacaccagacaagacccaggttctccttcataac
aaggaggctgtgctgactgcagtagaggctttactggtttctctatatggctgtcagccc
agtagcgaccccccaccggggaagcagctcagccatgaaacatcttcaccatctagtcct
ctgcagaccgatgcttcacaaccgggcggcgagacgagcgtggagagggatgtcacgccc
gacgaccgcggcggcgacgtcctcgaagatgcacccgaacgctgcgacgcggctccgtcg
acagccgggagcaccgatgttccactgaacagtcagacctccaacggcagctcttcatcc
tctatagcggaggactggatcgtcaaccagatcccagatgggctcgagtctaacttttct
ctttatgacgatgaaacggctaatacaggaagcaaatcccccgagagttgcgaggacaat
ggcgtgttagacgcagacacgagtaaagacggtctatcagctgaggactggagcaggggg
acggctctgacggaccccgtgtcaggagaaccccttcaacccgtcgaaatccatcaaccc
tcaaagcacaatcactcagactcggatgagatcaagagcagctcaaacaaaaaggtgttc
aacgtgataacggaaaagcgggcggctctgacggcctacgacctgatcagcaaccgcgtc
atgagggcaccgctgtctcccgccgccctctatgagaaggaggtcagagcagaggtcctc
agggagaaacccacagccagcctgcaggatatcagcgtcgccgttcacgagagatggaaa
aatctgagggaggaagaccgtaagaagtatgaggagaaagcaaaaaaacacctggaacac
cacaaccacaagaccaagttggcctccgccgaaggtcccagagagacgagcgcgagcacc
ccgagaggccacgcgcagggccagaaacgcaaggccccgctctccaaccagcagctgctg
gacgagctcttctccgctcagccccagaagaagatgaggaaccctgcgcctaaaccctca
cagcccctcccctgcagcgtggctgcccttcggctgcagcttcagcgcctctcatcccag
agcagcgcagcaccgcggggcctccgtcttgtaaaccggctggcctctcagagcgcctgg
gtcattttatgtggtcagaggctcatgttgttaaacccatttcgagtggaggaagccttg
ttgtttaagagacttctagagaataatatacttccagcagtgagtctgcagaaccctata
cagttaacagatgggagtctcaggggagctgagtatgtcgaggctttgtgcaacatgaag
aaacaaaaccctgatctgaacggaacgatgttcatctctgatcccagaatcgtggctaac
gggtttaaaatcagactcactccaggtctcacgtcagccgagagacatctggaagtgaca
gctatggcagactgcgtgcctttcctcggcgtggaggacctcagggagatcctgactgca
gttcttcacaggaaggccagcaccgtgcatgagtgccggccacttaaagtcacaaactac
ctacaaggtgaagcggttcgactggcccggcagctgccctcacatttatccagagaggat
gtgcaggagacgcttcagcggatggaacagcagcttgatgagaacaaccggacctgtttc
catggacgaccgtttctacaacacctaactgacatccctcgtacagacgaggaagccgag
gctctgctcaagcctttagagctgtaa
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