Thunnus thynnus (Atlantic bluefin tuna): 137192398
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Entry
137192398 CDS
T11154
Symbol
col18a1a
Name
(RefSeq) collagen type XVIII alpha 1 chain a isoform X1
KO
K06823
collagen type XVIII alpha
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tty04147
]
137192398 (col18a1a)
00535 Proteoglycans [BR:
tty00535
]
137192398 (col18a1a)
00536 Glycosaminoglycan binding proteins [BR:
tty00536
]
137192398 (col18a1a)
Exosome [BR:
tty04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
137192398 (col18a1a)
Proteoglycans [BR:
tty00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
137192398 (col18a1a)
Glycosaminoglycan binding proteins [BR:
tty00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137192398 (col18a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137192398
NCBI-ProteinID:
XP_067459144
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All DBs
Position
11:complement(8412908..8502812)
Genome browser
AA seq
1436 aa
AA seq
DB search
MRTQFGVLFFLTLWVVYSDAWFWSWTSTTTMAPTVEPEGSGGSGSGEIPTENIARHGAEI
IDEGHGIHKAAQNWDETTEAPRLTTLIPTTELEIEGTSERGTAEISSRTRKPEDSGVSLL
QLIGDPPPNEITRVYGPDNSPGFVFGPDANTGQLARAHLPSPFYRDFALIFNLKPTSNKG
GVIFSVTDAAQQIMYVGVKLSDVQGGNQNVILYYTEPDSQQSYEGARFLVPSLRDTWTRF
AIAVRDDRVMFYLNCDTDPQVMRIERSPDEMELEAGAGVFVGQAGGADPDKFLGVIGELR
VVGDPRAAERHCEEDEDDSDMASGDGSGYGETRPLKPALEKHTWTTSPPSSRPIQQPPVI
RKEEASITRETGPIGAKGAKGDRGDRGEKGDRGPTGAKGEAGSGSGFSSRGGGPGGKGER
GEKGAKGSAGFGSQGPKGEPGLPGPSGPPGPPGPSADFSAGSDGSVVSRVPGPRGPAGPH
GVPGPPGPPGADGEPGDPGEDGKAGAEGPPGFPGTPGDPGPKGDKGDRGEGQPGPRGPPG
PPGPPGPGIRSTFVDMEGSGFPTLDSPQGPPGPPGPPGPPGPPGPSTTGTALSSGAFGPP
GKDGAKGQDGLPGLPGTDGLPGAPGPKGEKGDSGELGLPGAVGEKGARGDPGLPGTTGQT
GLAGLPGPQGPVGPPGPPGPPGPSYRVGFDDMEGSGGVLSNGLPGIRGPAGRQGPPGTPG
VPGKNGLPGLPGQKGMEGPVGKDGRPGLDGFPGPPGQKGDRGDKGETGEPGRDGIGLQGP
PGPPGPPGQVIYQNPDNFDGVAGRVGPQGGPGLPGQAGFPGPIGPKGDRGEPGTPGYGSK
GEKGEPGLVIGPDGNPLYLDGLIGLKGERGPIGPAGPPGPYGPPGLKGEIGMPGRPGRPG
VNGYKGEKGEPGGGAGYGYPGVPGQPGPPGPPGPPGPAIPIDRFNRYDETSRNYPAIKGE
KGERGDRGVPGIPGTSSNIDIYAFKNELKGERGTTGVKGEKGEPGGGYYDPRFGVQGPPG
PPGKQGLPGPKGDSIMGPPGPPGSPGQPGIGYDGRQGPPGPPGPPGTPGSYSLPGAYRPN
QPVSVPGPPGPPGPPGSPGLSSGVTVLRSYDTMIATARRQAEGSLIYIIDKADLYLRVRD
GLRQVMLGEYSPFFRDLENEVAEVQPPPVILYSQSPEQSHNNGAGHYSQDVSAARPIEPP
PHPPVDPRYPPRYDPRFPDPRYTDGRSATHQSENRYPVTPQRRPSQPVVQPAVHAGTSAS
GLHLIALNAPQTGNMRGIRGADFLCFQQARAVGLKGTFRAFLSSKLQDLHTVVRRSDRDS
IPIVNLKDQTLFSSWESIFSDDASKMRENVPVYSFDGRDILRDSAWPEKMIWHGSSKKGH
RQTDHYCETWRAGDRAVTGLASSLHSGHLLQQSSSSCSSSYIVLCIENAFTSPSKK
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgaggacccagtttggagttttgttttttttgaccctgtgggtggtctactccgatgct
tggttctggtcctggactagtaccacaactatggctccaacagtggaacctgaggggtct
ggtggttcaggtagtggagaaattccaacagagaatattgcaaggcatggagcagagatc
attgatgaaggacatgggatccacaaggctgcgcagaattgggatgagactactgaggct
cctcgactgaccactctaatacctacaacagaactggagattgaaggcacatcagaaagg
ggcacagcagagatctcgtctcgcacacgtaaacctgaagacagtggagtctccctgctg
cagctcattggggaccctcctccaaatgagatcaccagagtctacgggccagacaacagc
cctggcttcgtctttggccccgatgccaacacgggccagctggcgcgtgcccacctgccg
agcccattctaccgagactttgccctcatcttcaacctgaaacccacctcaaacaaggga
ggcgtcatcttctctgtcacagacgccgcacagcagatcatgtatgtgggtgttaaactg
tcagatgtgcagggcggcaaccagaatgtgatcctgtactacacagagcctgactcacag
cagtcttacgagggggccaggttccttgtgccctccttgagggatacctggacccgtttt
gccatcgctgtgagggatgatagggtgatgttctacctcaactgcgacacagatcctcag
gtgatgcgcatagagaggtccccggatgagatggagctggaggctggcgctggagtcttt
gtcgggcaagctggaggggctgatcctgataagttcctgggggtgatcggtgagctgagg
gtggtgggagaccctcgtgcagctgagaggcactgtgaagaagatgaagatgactcagat
atggcttcaggggatggaagtggctacggagaaaccagaccgctaaaaccagccctggag
aaacatacatggacgactagtcctccatcttcccgacccattcaacagccacccgtgatc
aggaaagaggaggcgtcaattacaagagagacagggccaattggggctaaaggagcgaag
ggtgaccgaggggacagaggagagaaaggagatagaggtccaactggggcgaagggagaa
gcaggttcaggctctggcttcagttcacggggtggaggccctggaggaaagggagaaaga
ggggaaaagggagccaagggcagtgcaggctttggctctcaaggaccgaagggagagcct
ggcctccctgggccctctgggccccctggtccccctggcccttcagccgatttttcagct
ggcagtgacggctcagttgtttcaagggtccctggaccccgaggaccagctggaccacat
ggtgtcccaggcccaccgggaccaccaggagctgatggagagccaggtgatcctggtgag
gatggaaaagctggtgctgaaggacctccaggcttcccaggaactccaggtgaccctgga
cccaaaggggataagggagaccgcggagagggacaaccgggccccaggggacccccaggt
cctcctggacccccaggacctggaatcagatctacttttgtggacatggaaggctctggg
ttccccactttggattctccccaggggccaccaggtccccctggtccccctggtccccct
ggtcctcctggtccctctacaacaggtacagcattgagttctggagcatttggaccacca
gggaaggacggcgcaaaaggtcaagatggtttgcctggtttgccaggtactgatggcctc
ccaggagctcctggtcctaagggagaaaagggtgattcaggcgagctgggtcttccagga
gcagttggagagaagggagctagaggagacccaggtttaccaggaacaacaggacagact
ggactggctggtctgcctggaccacagggaccagttgggccacccgggccacctggacct
cctggaccaagttatcgtgttggatttgacgacatggagggctccggcggagttttgtct
aatggacttcctggcatcagaggaccagctggaagacagggtcctcctggcacgcctgga
gttccgggtaaaaatgggttgcctggcctaccaggccaaaagggcatggaaggtcctgta
ggaaaagatgggcgaccgggattggatggcttccctggacctccgggacagaagggtgac
agaggtgacaaaggagagacgggggaaccaggccgagatggaatcgggctccaaggccca
ccaggcccacctggaccaccaggacaagtcatctaccagaatcctgacaattttgatggt
gttgctggcagagttgggcctcagggaggacctggtttacctggtcaagctggattccct
ggtccgattggaccaaagggtgacagaggagaaccaggcaccccaggttatggatcgaag
ggtgagaagggtgagccaggcctagtaatcggtcctgatggaaatcctctgtatctggat
gggctaataggtttgaagggagagagaggacctattggacctgctggacctcctggtccc
tatgggcctcctggattaaagggtgaaattggaatgcctggaagacctggtcgccctggt
gtaaatggatacaagggtgagaaaggagagccaggaggaggtgctggctatggctaccca
ggagtccccggccaaccaggacctcctggaccacctggacctcctgggccagccattcct
atagatcgcttcaatcgctatgatgaaacttcaaggaattatccagcaattaaaggagaa
aaaggggagcgtggtgaccgtggagttccagggatcccaggaacgtcctccaatattgat
atttacgctttcaagaatgaactgaagggagagcgtggaaccacaggagtgaagggagaa
aagggagagcctggtggtggatattatgacccacgttttggagtacaaggcccaccagga
cctcctggcaaacaaggcttaccgggaccaaaaggagattccataatgggccctcctgga
cctccgggatcaccagggcaaccagggattggttatgatgggcgtcaaggccctccaggt
ccacctggacctccaggcacaccagggtcttactctctacctggagcatataggcccaat
caacctgtcagtgtaccagggcctcccggtcctcctggaccccctggaagtcctggtcta
tcatctggggttacagttttgaggtcatatgacacaatgattgctactgccagacgccag
gcggagggcagcctgatctacatcatagacaaagcagacctctatttaagagtccgcgac
ggactgcgacaagtcatgcttggagagtacagtcccttcttcagagatctggagaatgag
gtggcagaggtccagcctccacctgtcatcctatactcccagtccccagaacagtcccac
aacaatggagctggccattactcacaggatgtttctgctgcacgacccatcgagcctcca
ccacacccacctgtagaccccagatacccaccacgttatgatcccagattcccagacccc
agatacacggatggaagatcagccactcaccagtctgagaacagatacccagtaactccc
cagcgacgccccagccaacctgtagtgcagcctgcagtgcatgcgggcacatcagcatca
ggactacatctcattgccctgaatgcccctcaaactggtaatatgcgaggaattcgcggg
gcagacttcttgtgcttccagcaggcccgtgccgttggcctgaagggcaccttcagagct
ttcctgtcctccaagcttcaagacctccacaccgtcgtccgcaggtcggacagggacagc
atccctattgtgaacctcaaggaccaaacgttgtttagcagttgggagtccatcttcagt
gatgatgcgagcaaaatgagggagaatgtaccagtttactcctttgatggaagagatatc
ctcagggacagtgcatggccagagaaaatgatctggcacggctcaagcaagaaaggccac
cggcaaacagaccactactgcgaaacatggcgggcaggcgaccgcgctgtgactggtttg
gcatcatcactacacagcggccacctcctgcagcaaagctccagtagctgttccagctcc
tatatcgtcctctgcattgagaacgccttcacatcaccctccaaaaaataa
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integrated database retrieval system
