Thunnus thynnus (Atlantic bluefin tuna): 137192628
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Entry
137192628 CDS
T11154
Symbol
ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04622
RIG-I-like receptor signaling pathway
tty05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
137192628 (ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137192628 (ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tty04054
]
137192628 (ifih1)
Enzymes [BR:
tty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137192628 (ifih1)
Pattern recognition receptors [BR:
tty04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
137192628 (ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137192628
NCBI-ProteinID:
XP_067459575
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Position
11:complement(17714142..17726042)
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AA seq
995 aa
AA seq
DB search
MEPEEDNIYETLIEQLWPRLRELIVVEQVLDHIHFIKADQKDQIRQKERTEGNPTAANLL
ISTVIKKPHEPGWFQAFVDALIQAGCRHAADYMQGKLPEPEVEAENDYCVQLIQILSPSL
VDMNTAQVCLQCNASKLLTLEDADIVNAETTNRGPRNGARELLRRIVRGRPGWFSEFLNV
LRKTEHKHLLHQLTGGPPDNDKQDEKLSSLKDEPSGSGTATEESTAGAESCDSPESVDIS
MTTETQEEAAELYKGENTDSTQLPNSSEPSQPDGTDSEAAAGCPEKADIVLRDYQMEVAR
PALEGKNIIICLPTGSGKTRVAVYITKKHLDCRRAEGQSGKVVILVNKIPLVEQHYSAEF
LPYLKHTYKVERVSGDSQLKISFTEIVKKNDVIICTAQILENYLERSNKGDDEGVDLKDL
TLIVIDECHHTQKGGVYNHIMMRYLKQRHKNKRLQKEQKKPVSLPQILGLTASPGVGGAT
KMDKAEEHILRICANLDASKIMTGNLGEYKKELDKIIVTVEDRKEDPFGHVIKKIMNAIH
THAELSPTCALGSQNYEQWVVQKERTAATEEDQKVRVCAEHLRQYSEGLQLSNTIRMRDA
FSFLNKYHEEERKRKTTPDDEDTIQITNTERFLFKLFDENKDELEKLAENPEYENDSLSK
LRTTILREFSSRKEGRGIIFTKTRRSAIALSQWVQENPKFADIGVKASYVIGGGDQSVVK
PMTAAEQRDVLSKFGNGEVNLLIATTVAEEGLDIPACNFVIRYGLVTNEIAMIQAQGRGR
AEDSSYTLVEVKGSGVAEKECVNEYRKTMMHKAIDKIRALPQADYEKKITEYQIQAIMEE
KVRMVKKKQKELKNENPSDLKFSCRGCSKNVCSGEDIQIIENMHRVNVSSQFSQLFIRRE
NTTLQERLLDYETNGFITCKDCGQRWGSMMLYRGIECPCLHVKNFVVASNGKKISKCTKW
SELAVKFSAFDYAEHASRVAESSDDDDEEEEEETK
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgaggaagacaacatttatgaaactctcattgagcaattatggcccaggctg
cgagagcttatcgtggtggaacaggttctggatcacatacatttcatcaaagccgaccaa
aaggatcagatcaggcaaaaagagaggaccgagggtaaccctacggccgcgaatctcctc
attagcacggtcatcaagaagccacacgagcccggctggttccaagcgtttgttgacgcg
ttaatacaggcaggctgtcgacatgcggcggactacatgcagggcaaactcccagaacct
gaagtggaggcagagaatgattactgtgtccagcttattcaaatactgtctcccagtctt
gttgacatgaatactgcacaggtgtgcctacagtgtaatgcgagcaaactactcaccctt
gaagacgcggatattgttaatgctgaaacgacaaacagaggacccaggaatggagctcgt
gaacttctgagaagaatcgtgagaggtcgcccaggatggttttctgaatttctcaatgtt
ctacgtaaaactgaacacaagcaccttcttcaccagctgacaggagggccacctgacaat
gacaagcaagatgagaaactctcttcactgaaagatgaaccttcaggaagtggtaccgcc
acagaggagagtacagcaggagctgagagctgtgatagtccagaatctgtggacatcagc
atgaccacggagacacaggaggaagccgcagagctctacaaaggagaaaatactgactcc
acacaactgccaaacagctcagagccctcacaaccagatggaactgactcagaagcagca
gccggatgcccagaaaaagctgatattgttcttcgagattatcagatggaggttgctaga
cctgccttggaggggaaaaacatcatcatatgcctcccgacaggaagtggtaaaaccaga
gttgcagtttatattaccaagaaacatctggactgcaggagggctgaagggcaatcaggg
aaagtggtcatcctggtgaacaagatccctcttgttgagcagcattattcagcagagttc
cttccatatctgaagcacacatataaagtggagagagtgagtggagactcccagctcaaa
atctctttcacagagattgtgaagaaaaatgatgtcatcatttgcacagcccagatcctg
gagaactacttggaaaggtccaacaaaggagacgatgaaggagtggacttaaaagatctg
acactgattgtgatagatgagtgtcaccacactcagaagggaggagtctacaaccatata
atgatgcgctacttgaagcagaggcacaagaacaaaaggctgcagaaggagcagaagaaa
cctgtgtctctccctcagatcctgggcctgactgcctcacctggggttgggggagccaca
aaaatggataaagccgaggaacacattctgcgcatttgtgcaaacttggatgcttccaaa
atcatgacagggaaccttggggagtataaaaaggaactagacaagatcattgtaacagtg
gaagacagaaaagaggatccttttgggcatgtaatcaagaaaatcatgaatgctattcat
acccatgctgagctgagccccacttgcgctcttggctctcagaattatgaacagtgggtc
gttcaaaaagagcgaacagctgcaacagaggaagatcagaaagttcgggtttgcgcagag
caccttcgacagtacagcgagggcctgcagctcagcaacaccattcgcatgcgtgatgcc
ttcagtttcctgaacaaataccacgaggaggagaggaagagaaaaacaaccccggatgat
gaagacaccatacaaattacaaacactgagagattcctcttcaaattgtttgatgagaac
aaggacgagctggagaagcttgcagagaatcccgagtatgaaaatgacagcctgtcgaaa
ctaagaaccacaattctgcgcgagttcagcagcaggaaggaaggcagagggatcattttc
accaagacacgtcgcagtgccattgccttaagtcagtgggtgcaggaaaaccccaagttt
gccgacattggagtgaaagcctcatatgtcatcggaggaggagaccagagtgttgttaaa
ccaatgacggctgcagagcaaagagatgtgttgagcaaattcggcaatggcgaagtcaac
ttgctgattgctaccaccgtggcagaggaaggtttggacataccagcgtgcaattttgtt
atccgatatggccttgtgaccaatgagattgctatgattcaggctcaaggcagaggacga
gctgaggacagcagttacaccctggttgaggtgaaggggtctggagtggctgaaaaggag
tgtgtcaatgagtaccgcaagaccatgatgcacaaagccattgacaaaatcagagcctta
cctcaagcagactatgagaaaaaaatcacagagtatcaaattcaagctataatggaggag
aaggtgagaatggtaaagaaaaagcagaaagaactgaagaacgagaacccgtctgatttg
aagttcagctgtcgaggctgcagcaaaaacgtctgctccggtgaagacatccagatcatc
gaaaacatgcacagagtcaatgtttcatcacagtttagtcaacttttcattcggagagaa
aacactactcttcaagagcggcttctagattatgagaccaacggcttcatcacatgcaag
gactgtgggcagagatggggttcgatgatgctctaccgcgggattgagtgcccttgcctc
cacgtgaaaaactttgtggtggcgtccaatggaaagaagattagcaaatgcaccaagtgg
agtgagctcgccgtcaagttttcagcttttgactacgctgaacatgccagccgggtggca
gagagctcagatgatgatgatgaggaagaagaagaagaaacaaaatga
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