Thunnus thynnus (Atlantic bluefin tuna): 137193016
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Entry
137193016 CDS
T11154
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137193016 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137193016 (hspd1)
03110 Chaperones and folding catalysts [BR:
tty03110
]
137193016 (hspd1)
03029 Mitochondrial biogenesis [BR:
tty03029
]
137193016 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tty04147
]
137193016 (hspd1)
Enzymes [BR:
tty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
137193016 (hspd1)
Messenger RNA biogenesis [BR:
tty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
137193016 (hspd1)
Chaperones and folding catalysts [BR:
tty03110
]
Heat shock proteins
HSP60 / Chaperonin
137193016 (hspd1)
Mitochondrial biogenesis [BR:
tty03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
137193016 (hspd1)
Exosome [BR:
tty04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
137193016 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
137193016 (hspd1)
Exosomal proteins of breast cancer cells
137193016 (hspd1)
Exosomal proteins of colorectal cancer cells
137193016 (hspd1)
Exosomal proteins of bladder cancer cells
137193016 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
137193016
NCBI-ProteinID:
XP_067460273
LinkDB
All DBs
Position
11:26678529..26685682
Genome browser
AA seq
620 aa
AA seq
DB search
MCSPLSSAQLHHTAVLSSSRYIIPSRRRVPCRNYKPSYLTKMFRLPTVMKQVRPVCRALA
PHLTRAYAKDVKFGPDARALMLQGVDLLADTVAVTMGPKGRTVIIEQSWGSPKVTKDGVT
VAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFDTISKGANPVE
IRRGVMMAVETVINELKKLSKPVTTPEEIAQVATISANGDEEIGNIISNAMKKVGRKGVI
TVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQDAYLLLSEKKISSVQSIVP
ALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMAIA
TGGTVFGDEALGIALEDIQAHDFGKVGEAQITKDDTLLLKGGGNPADLEKRAAEIVEQLE
NTTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDRVTDALNATRAAVEEGIVPG
GGCALLRCIPSLDTIKPANADQKMGVEIIRRALRIPSMTIAKNAGVEGSLVVEKILQGPA
EVGYDAMQGEYVNMVERGIIDPTKVVRTALLDAAGVASLLSTAEAVVTEIPKEEKDMPGG
GMGGMGGMGGMGGMGGGMGF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagtcccctctcttctgctcaattgcaccatactgctgtcctctcctccagtcgt
tatatcattccgtctcgcagacgtgtaccttgtagaaactacaagccctcttacctcaca
aagatgtttcgtttaccaacagtcatgaagcaggtgaggcctgtttgcagggcactggct
cctcacctcacacgagcctacgctaaagatgtgaagtttggacctgatgctcgtgccctc
atgctgcagggagtggatctgctggctgacactgtggctgtcaccatgggcccaaagggt
cgcactgttatcatcgagcagagctggggaagccctaaggtcaccaaggacggcgtgacg
gtggccaagagcatcgacctgaaggacaagtacaagaacatcggtgccaagctggtgcag
gatgtggccaacaacaccaacgaggaggctggtgacggcaccaccactgccacagtgctg
gctcgtgccattgccaaggagggctttgacaccatcagtaaaggtgctaatcctgtggag
atccgccgtggtgtcatgatggccgtagaaaccgttatcaatgagctgaaaaagctctcc
aagccagtcacaacccctgaggaaatcgcacaggttgctacaatctcagccaatggagat
gaggagattggtaacatcatttccaatgccatgaagaaagttggtcgcaagggagtcatc
actgtcaaggacgggaagactctgcacgatgagctggagatcattgagggtatgaagttt
gaccgtggttacatctccccatacttcatcaacaccgccaagggccagaaatgtgagttc
caggatgcctacctgctactgagtgagaagaagatctccagtgtgcagagcattgtgcca
gccctggagattgccaaccagcaccgcaaaccactggtcattgtggctgaggatgtggat
ggagaggccctcagcaccttggttctcaacaggctcaaggttggactgcaggtggtagca
gtcaaagctccaggctttggagacaacaggaagaatcagctgaaggatatggccatcgcc
accggaggcactgtgtttggagatgaggctttgggcattgctcttgaagacatccaggct
catgacttcggcaaggttggtgaggcacagataactaaagatgacaccttgctgctgaaa
ggaggcggcaacccagctgacctggagaaacgggcagcagagattgttgagcagctggag
aacaccaccagtgactatgagaaagagaaactcaacgagaggctggccaagctgtctgac
ggagtggctgtgctcaagattggaggaacaagtgatgtggaggtgaacgagaagaaggac
cgtgtgacagatgctctgaatgccacacgggcagctgtggaggagggcatcgtacccggt
ggaggctgtgctctgctgcgctgcatcccctccttggataccatcaaacctgccaatgcc
gaccagaagatgggtgtggaaatcatcagacgggcactccgtatcccctccatgaccatc
gctaagaacgcaggtgtggaaggttcgctagtagtggagaagatcctgcagggaccagcc
gaggtcggctacgatgccatgcagggagagtacgtcaacatggtggagaggggcatcatt
gaccccaccaaggtggtgaggacagcactgctggacgcagcaggagtagcctccctgctc
tccactgccgaggctgtcgtcacagagatacccaaggaggagaaggatatgccaggaggc
ggcatgggaggcatgggaggcatgggcggtatgggtggcatgggaggcggcatgggtttc
taa
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