Thunnus thynnus (Atlantic bluefin tuna): 137193626
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Entry
137193626 CDS
T11154
Symbol
depdc5
Name
(RefSeq) GATOR1 complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
137193626 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137193626 (depdc5)
Membrane trafficking [BR:
tty04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
137193626 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
FGGY_N
Motif
Other DBs
NCBI-GeneID:
137193626
NCBI-ProteinID:
XP_067460976
LinkDB
All DBs
Position
12:complement(4077353..4096921)
Genome browser
AA seq
1589 aa
AA seq
DB search
MKTNKSYKLVLHKKGFGGSDDELVVNSKVFPQVSIGDIIEIAHPTDEYSPLLLQVKSLKE
DLQKETISVDQTVAQAFKLRAYQDVIVNIVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYSAKTIDEFPEILRA
SIRQDHEGRFYEDFYRVVAQNERRDEWTSLLVTIKKLFIQYPVLVRLKEADGFPVGYNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRTTPGDSRVGDDYNLPHWINHSFYTSKSQNSCSSFT
PRIKLAGRKLHAEKFKSSKDHTLCAPKDSDNSLPIQVDYDAYDAQVFRLPGPSRIQRSTN
FRMGRDKETSGRKSWGSVDVSTGIGASPPVRSGGPDEQRSLASDDSLGPVSNMLLIPRMP
PAQYEVSSSLGYTSTRELLEKMMDSQRDSSAPGRFTVGSAESTLHIRPGGYTPQRALINP
FTPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSQQRDPAHTSAELLE
LAYHEATGRRTTSRQTGENGLYIGGGMEEFTGSPRSNSSGALTNRGSSFEDFSLSGADPT
LLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQTLQNDYTEGCYDLLPHSDLE
RREDEAPVMSATQVFEEFICQRLMQGYQIIVQPNNRKPQPAVATPLGSSPLYSRGLVSLR
RAEEEETVYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESAQIQYSYSLCPPHSDAQFVS
CWVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVADGEGH
WDVYGDGASTGMGGSGEWVLLDGFIRFLEGLNRIRRRHRSDRIIRQKGTPMKGLQVTSPL
PPYPTEPVAPPQGKKGTSALSALLEMDQNQKTLEEQQQQQAKPSAAISDPASVATALSYV
DSPRKDAAFILDFIRSPRSSYIYHSQLPAEATEAADKGVQPGVTAGAAAQPAGETAASSS
TDTSGQSAAGALSLSSSSTLMEILEAIKHPTTGVQLLPEQKGLPLHCFISAEVVHWLVNN
VEGVATQGMAVDVMQKMLDEGLVAHASGDAMRTFVYGFYFYRIVGEKDGPTSQLTPSAAG
GWSAAALEDFALFQRKWFEVAFVLEERRPCDLPAFLLPWLPSRPASYASRHSSFSRSFGG
RSQAAALLAATVPEQKTVTVDVDVNNRSDRTEWCSCYYHGNFSLNAAFEIKLHWMAVTAA
VLFEMVQGWHRKAASCGFLLVPVLEVPFALTSYLYGDPLRAQLFIPLNIHCLLKNGSDNL
FEGFEPETYWDRMQLFQEAILYRFGFVHDKFSASSFNFPSENKPQYIHVTGTVFLQLPYS
KRKYPSGQQRRRRNSTTSNSQGPFGGEERAGYYWAYNTMLTKAWRTGVLGDERLADRLLR
DFSDFCANKDNRLLNFWDSCQEKMNASAP
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaataagtcatataagcttgtgctgcacaagaaaggctttggtgggagtgat
gatgagttggttgtcaactcaaaggttttccctcaagtcagtattggggatataatcgag
attgcacaccccacagatgagtacagtcctctcctgctgcaggtgaagagcctaaaagag
gatcttcagaaagagacgatcagtgtggaccagactgttgcgcaagctttcaaactgcgt
gcataccaggatgtcattgttaacattgtcgacccaaaggacgttacactggacctggtg
gagctgactttcaaggaccagtacatcggtagaggggacatgtggagactgaagaagagt
ctggtgagcacgtgtgcttatgtgacacagaaggtggagtttgctggaatcagagcccag
gccagtgaactctgggtgaagggagagaaagtgacctgtggttacatcagtgaagacacc
agggtggtgttcagatccacatctgcaatggtgtacatctttatccaaatgagctgtgag
atgtgggactttgacatctatggtgacctctactttgagaaggctgtaaatggtttcctg
tcagaccttttcgccaaatggaaggagaagaactgcagtcatgaagtgacggttgtactc
ttctcacgtaccttctacagtgctaaaacaatagatgaatttcctgagattctcagagcg
tccatcagacaagatcatgaaggacgtttttatgaagacttctacagggtcgtggctcag
aatgagagacgggatgagtggacgtcattactggtcactatcaagaagctcttcattcag
tatcctgtcctggtgcggctgaaagaagcagatggttttcctgtcggttacaactccacc
tctgcccaaggaaactacctggaggccattaacctttctttcaatgtgtttgacaagcac
tacatcaaccgtaactttgaccgcactggccagatgtcagtggtcatcacacccggggtt
ggagtgtttgaagtcgaccgtctgcttatgattctcaccaaacagcgtatgattgataac
ggtattggtgtagacttggtgtgtatgggggagcagccattgcatgcggtaccattattc
aagttgcacaataggacgacacccggagactctcgtgtgggagacgactataacctccct
cactggatcaaccacagcttctacacctccaaaagtcagaactcttgcagttccttcacc
cctcgaatcaaactggctggccgcaagcttcatgctgaaaaattcaagagcagcaaagac
cacactctctgtgcaccaaaggactctgacaacagcttgccaatacaggtggactacgac
gcctatgatgctcaggtgttcagacttcctggtccttcacgaattcagagaagcaccaac
ttcaggatgggtcgagacaaagagacgagtgggaggaagagctggggctcggtggacgtc
agcacaggcattggtgcatcccctcctgttcgctctggaggtccggatgagcagcgtagc
ctggcctctgatgacagtctgggccccgtgtccaacatgctgctgataccccggatgccc
cctgcccagtatgaagtcagcagttctctgggatacacaagcaccagagagctgttggag
aagatgatggactctcagcgggactccagcgcaccaggaaggttcacagtgggaagtgct
gagtccactttgcacatccgcccaggaggttacacccctcagagagcgctcataaacccc
ttcactccatccaggatgcccatgaagctcacctccaaccgcaggcgctggatgcacacc
ttccctgtcggtccatctggagaggctattcaaatccatcaccagaccagacagaacatg
gctgaactgcagggcagccagcagagagaccctgcccacacctcagccgagctgctggag
ctggcctatcacgaggctaccggaagacgaacaacctcacggcaaacaggagagaacggc
ctttacatcggtggagggatggaagagttcactggaagtccaaggagcaacagtagtgga
gctctgaccaaccgcggctcctcatttgaagacttctccctcagtggtgccgatccaacc
ctgctgctgtctgcacccccaacagtgcccagcttctgctgcacggtgggggtggactgg
aagtctctgaccacaccggcctgcctgcccctcaccaccgactacttccctgaccgccag
acgctgcagaatgactacactgaaggctgctacgacctgctgccgcacagcgacctggag
aggcgggaagatgaagctccagtgatgagtgccactcaggtgtttgaggagtttatctgt
cagaggttgatgcagggctaccagatcatcgtccagccaaataacaggaaaccacagcca
gctgtggccacaccccttggcagcagccctctatactccagaggtctggtgtctctgcgt
cgagcagaagaggaggagacggtgtactggctcagtatgggccggacctttcataaagtt
tgcctcaaagacaagatcatcactgttactcgctacctgccaaagtacccgtatgagtct
gctcagatccagtacagctacagcctgtgtcctccacattctgatgctcagtttgtgtcc
tgctgggtggagtttggccatgagagactggaggaatacaagtggaactacctggaccag
tacatctgctctgctggctctgaggacttcagtttgatcgactctctgaagttctggagg
actcgcttcctcttgctgccggctgggggggctcggcgggtggcagatggggaggggcac
tgggatgtttacggggatggagcgagcactggaatgggtggcagtggagagtgggtcctg
ctggacggcttcatccgcttcctggagggcctcaaccgcattcgacggcggcatcgctcc
gacaggatcatcagacagaagggcacaccaatgaaggggctgcaggttaccagtcctctc
cctccatatcctactgaacctgtagcgcccccacaaggcaagaaaggcacatcagctcta
tcagccctgctggagatggatcagaaccagaagacgctggaggagcagcagcagcagcag
gcaaagccctcagcagccatcagtgaccctgcaagtgttgctacagctctctcatatgta
gacagtccacgcaaggacgctgcctttattttggattttatacgtagccctcgctcctcc
tacatctatcactctcagttgcctgctgaagccaccgaggctgcagataaaggagtccag
ccaggagtgacagctggagcagcagcacagcctgcaggagagactgcagccagcagcagc
acagacaccagtgggcagtctgcagctggagccctttctctgtcctcttcctcaacactc
atggagatcctggaggccatcaaacatcccacgacaggagtacagctgctcccagagcag
aagggtctgccactccactgcttcatcagcgccgaggtggttcactggctggtcaacaac
gtggaaggcgtggccacacagggcatggctgtggatgtcatgcagaagatgctggatgaa
ggtttggtggcccacgcttctggggatgccatgcgcaccttcgtctatggtttctacttc
tacaggatagtaggagagaaggacggtccgacctcccagctcaccccctcagcggctggt
ggctggtcagccgcagctctggaggactttgccctgttccagaggaagtggttcgaggtg
gccttcgtgttggaggagcggagaccctgcgacctcccggccttcctcctgccctggctg
cccagccggccagcttcctacgcaagtaggcacagctccttcagccgcagctttggagga
cgcagccaggccgccgcactgctagctgctacagtcccggagcagaagacggtcaccgtg
gatgtggatgttaacaaccgcagcgaccgaactgaatggtgcagctgttattaccacggc
aacttctccctcaacgccgcctttgagatcaagctgcactggatggctgtcaccgctgca
gtgctctttgagatggttcaagggtggcacaggaaagcggcgtcctgcggcttcctgttg
gttcccgtgctggaggttcctttcgcactgacttcttacctgtacggagacccactgaga
gcccaactcttcatccctctgaacatccactgtctgctgaagaacggcagtgacaacctg
tttgaaggtttcgaacccgagacgtactgggacaggatgcagctctttcaagaagccata
ctctacagattcggctttgtgcacgacaagttttctgcctcttcttttaatttcccctca
gagaacaagccccagtacatccacgtcacaggcaccgtgttcctgcagctgccgtattct
aagaggaagtacccgagcgggcagcagcgccggcgcagaaactccaccacctccaacagc
caggggccgttcggcggcgaggaacgggccggttactactgggcgtacaacaccatgctg
accaaagcctggaggacgggcgtgctgggcgacgagaggctcgccgaccgcctgctcaga
gactttagcgacttctgcgccaacaaggacaacagactgctgaacttctgggacagctgc
caggagaagatgaacgccagcgcaccctga
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integrated database retrieval system
