Thunnus thynnus (Atlantic bluefin tuna): 137193635
Help
Entry
137193635 CDS
T11154
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137193635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tty03019
]
137193635
Messenger RNA biogenesis [BR:
tty03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137193635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
DUF7310
Motif
Other DBs
NCBI-GeneID:
137193635
NCBI-ProteinID:
XP_067460996
LinkDB
All DBs
Position
12:complement(4217568..4245502)
Genome browser
AA seq
2514 aa
AA seq
DB search
MAAVLLQALERTELNKLPKGAQNKLEKFVTELQGANEVLRTQHERYKADSEQQYFDIEKR
LVESQEQFLSTTRDLQTFKEENKKLNEELSTLKGIEGDTSEDKPPQQQTKSKYEIEAEKR
ELARLLEKRTHEVENLTEDVKRLNEKLTETNKVKTELLLKLDDIQSTETSVQHREKRMEQ
EKELLEKKIEWLTAELKTKTEELLNTNREKGKEILELQGSLKSSKEQVNRLESQLTSLKE
TSESQSKRAEDLNNKLKQANDERAAMEEKYRNELNAHVKLSSLYKGAAADMETKNQELSR
AVEELSKLVKNTGEANKVLEKKVSEGEELKKRIEAELREKIKKMEKELENSAMKASGKQC
CVPSLTEEQLDSMCPSAAAIAAIVKPGMKFFDMYNAYAECQTQLQLEKQETRRVSRVLDE
IVQEVESKAPVLKRQREEYESMQRSMASLCNKLEQARTEIYSLQKEKEETKQRCDTLERD
KLRTERQLEDTSTQVCALLVELEEARGNQVTKDDGSSADISSTTEVISSRQLSFRSVEEL
QRQNQSLLGRLRELEEENDRRQSQVTSARVSELEASVDKLQKEVEQLREHRNQQKQLADS
NARQRDMFKALLTQSTGFNLPPQGPDSSSQPAQVRPSVPATRSTPQRAAAAESAQTAQTK
AALKQLNDAFTLYKKEKAENDRMLNDTNDRLQRQLTELRSSHAKLTSQLEFSNKRYEMLQ
ETVTAYRREISALQDRNQKMAATAQRHEHIIHTMSQDLRQASEKLALEEVRVENLTKERD
ILRQAESRLSRDKEAMLAEQRNQNLLLTNFKSIQLTMERTETDTRQRLNNKIEHLEAELA
SMKTRLEQEVAQRHALGRTMDAQLLEAKKQLETQNTLQQKTRELLRSSEQQVASLRTQLA
SASSSEAVTSSSNTTTPATRAPGLRAPLRATVRSPAPPASQQPSQSEQEVAEVKGLLRTA
EEQNSELAEQLKSANATVEQYRAVVLTLEDSLKKEKEARSPLEIRLKESEEVQKQLEKRI
LEVEKNKQQEQEERRKAVDAVEKQVCELQRNLKASQAEQQEALERAAAAVTLEQKAIQDS
LLQTKLAGEAQAKYERELMLHAADVEALQELKKRSQQEAARKRELEEQLNKTTSLMLEKS
AAWNTMERRLKDDLSSQSRRSEELGKQNTLLHLQMDEMATKSRQQQQQQQQHQLDLSFSE
EGKTTEQILEILRFVRREKEIAMARCEASEGEALRYKQRVEHQDRELKDLQEAVNAEREK
MQVTAKTLAQQEEQLKKIESIGALQETNKMLKMDRDKLEQELQQAQAKLTKLQSDISPLH
HSLSQLSEKNGSLQADKRILEEDLKRCRARVQQLVSQQKDGDVEERQKVTTEREAQQRRI
TQLAEETAKLKTELARSSASSNSAQSQLQALRDSVARLTSERDTLKKDLETKSSDILEKN
KTITQVKKIGRRYKTQYEELKAQHDKLVEETAAKAGSEAGSSQEVQQELTKAQEELNKAK
EELTTLKEEVQKKQEEAQKSRQESEEAQKENQQNKDKFQEVQNQLTQNQSQLTQVQSQLT
QTQTQLQQNQNQLTQSQKELQQAKTHSQQLQNQLKSAQSQAQARQNQIQQIQRELQQAKD
TLQQNLANQKELQQTQQTSQQSHNQEVTNLKTALSQAESKMTELQGQLDSLQKTVGEREA
DNKRLQEQLNEANQANEASRASSQSIQASDANIASDANQALQEELSKLRQELSDCKNREE
QLRQQMADKEEKTKKAFMGAKTKINQLNTAKEQLSHEVEELKQNKEDLEMRMSALKSQYE
GRLLRLDRELRELTETQTHSDPREEPQDQSGSKAVDPARSADQRQISLKSPAQDWGSSSL
SEPPTANIRPTPSTPSPSNKPSPSPGSKTTPRASIRPMVTPATMPVPTPTATVMPTTQTD
SQEAASVHSTSASLVNTPTSMTQPTSTQTTAFVQPTQQQAANQDASSSVEAERPSTSSSL
SGTAGSKRGREEEEEEEESRPESSHTPPTTKKLRLRTTMAPQMEGDEEIEGELGDEGERQ
DSPDDSQELPEESFPILAEDDEDIEGEGVSQSVPSDQMSLQGSTLIRDVIVIDTDSESRE
SKDGEDKQEDDGEEEEEEEEEEEEEEYKEEEDDDEDEDDAGDSEMRGGEESNEESREAEE
EEEEEPSEATNAEENVCGASSDSRRPSEPSHSEGSSSAASESDPPRDPVHLAPTSSPSSS
SLTPRLPQPRRPPHPLPPRLYIQPPAPELGPPHTQRQSSQLRRPSTGLQRGGLQLTPGIG
SNQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGLSTRFRFGPPEDLLPQTSASH
SDLGQLASQGGLGMYESPLFLAAHDEDGGGRSVPTTPLQVAAPVTVFTESLPSDSADNMA
SQSVPMVTASTGMASAADDGDEVFMEQEGEGPGIESSLDSQADMESAGQQSDDASLPSTS
QVPDTSSQRRSQPLISSLSGRGTRGGRGEARTLLSRRGTFARGRGGAMGRGSLL
NT seq
7545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcctgctgcaagctctggagcggacggagttgaacaaactcccgaaaggc
gcccaaaacaagctggagaagtttgtaacggagctgcagggcgctaacgaggtgctgcgg
acgcagcacgagcggtacaaagcagacagcgagcagcagtactttgacattgagaagagg
ctggtggagagtcaggaacagttcctgtccaccaccagagacctgcagacattcaaggag
gaaaacaaaaaactcaatgaagagctgagcactctgaagggaatagagggagacacgtct
gaagataaaccaccacagcagcagactaagtccaagtatgagattgaggcagagaagcga
gagctggcgaggctgctggagaagagaacgcatgaggtggagaacctgactgaggatgtg
aagcgtctgaacgagaagctgacagagaccaacaaggtcaagacggagctgctgttaaaa
ctggatgatatccagtcaacggagacttctgtacagcaccgggagaagcgtatggagcag
gagaaagagttgctggagaagaaaatcgagtggttaactgcagaactgaagaccaagact
gaagaactgctgaacaccaacagagaaaaaggcaaagaaatactggagctacagggtagc
ctgaagagcagcaaggagcaggtgaacagactggaaagtcagctcacctctctgaaggaa
accagtgaaagccagagtaaaagagctgaagacctcaacaacaagctcaaacaggctaat
gacgagcgggctgccatggaggagaaataccgcaatgagctcaacgctcatgtcaagttg
tcttcactctacaagggggcagcagcagacatggagactaagaaccaagaactgagcaga
gcagtggaagagctcagcaagctggttaaaaacaccggggaagccaacaaagtgctggaa
aagaaggtgtcagaaggagaagaactcaaaaagcggattgaggcagagcttagagagaag
atcaagaaaatggagaaagagctggaaaactctgcaatgaaggcttctggcaaacaatgc
tgtgtgccatctctgactgaggagcagctggactccatgtgtccatcagcagctgccatc
gctgccatcgtcaagcctggcatgaagttctttgatatgtataacgcgtatgcagagtgt
cagactcagctgcagctggagaagcaggagaccaggagagtcagcagagtgctggatgag
atcgtgcaggaggtggagtccaaagcgcccgtcctcaaacgtcagagagaggagtacgag
agcatgcagagatccatggcatctctgtgcaacaaactggaacaggctcgaacggagatc
tacagtttgcagaaagagaaagaggagaccaagcagcgctgtgataccctggagagagac
aagctgaggacagagagacagctggaggatacatctacacaggtgtgtgctctcttggtg
gagctggaggaagccagaggtaatcaggtgactaaggacgatggcagctctgctgacatt
tccagcaccactgaggtcatcagttcacgtcagctgtccttccgcagcgtggaggagctc
cagaggcagaaccaaagcctgctgggaaggctgagggagctggaggaggagaacgacaga
cggcagagccaagtcacatcagcacgtgtatcggagttggaggccagtgtggataaactt
cagaaggaggtggagcagttgagagagcacaggaaccagcagaaacagctggctgactcc
aacgccagacagagagacatgttcaaggctctgctgactcagagcaccggcttcaacctg
cctcctcaaggtccagattcttcctcccagccggcacaagttcggccctcagtcccagct
actcgctctactcctcagagagctgctgctgctgaatctgcacagaccgctcagactaaa
gctgctttaaaacagctgaacgatgccttcactctgtataagaaggagaaggcagagaac
gacagaatgttgaacgacacaaacgacaggctgcagaggcagctgacagagctccgctcc
agccacgccaagctgacctctcaactggagttcagcaacaagaggtatgagatgctccag
gagactgtaacagcctaccgtagagagatctctgcactacaggacaggaaccaaaaaatg
gccgcaacggcccaacgacacgagcacatcatccatacaatgagccaagacctgcgacaa
gctagtgaaaaactggcactggaagaggtgcgcgtggagaacttgactaaagagagagat
atattaagacaagcagagagtcgactcagtcgagataaagaagccatgctggctgagcaa
cgtaaccagaacctgcttctcaccaactttaagtcaatacagttgactatggagcgtaca
gagacagacactcgccagcgactgaacaacaagatagagcatctggaggcagagctggct
tcaatgaagaccagactggagcaggaagtagcacagaggcacgcccttggacgcactatg
gacgctcaattgttagaagccaagaaacagctggagactcagaacaccttgcagcagaag
accagggagttgttgcgtagttctgaacagcaggtggcctcgctgagaacccaactggct
tctgcttcatcctctgaggctgtcacctcctccagcaacaccaccaccccagcaaccaga
gcgccaggcctcagagcaccacttagagcaacagtacgttctccagcaccaccagcctcc
cagcagcccagccaatcagagcaggaagtggcagaggtgaaaggtctcctgcgtactgct
gaggaacagaacagtgaactagcagagcagcttaagagtgctaatgctactgtagagcag
tacagagctgtggtactgactctggaagacagtctgaagaaagagaaagaggcccgctcc
cctctggagatccgactgaaggagtcagaggaggtgcagaagcagttggagaagaggatc
ttggaggttgagaaaaataagcagcaagagcaagaagagaggaggaaggctgtggacgca
gtggagaaacaagtgtgtgagctacagcgcaatctgaaggccagccaagcagagcagcag
gaggcgctggagagagctgctgctgctgttacactggagcagaaggccatacaggacagc
ctgctgcagactaagctagctggagaggctcaggctaagtacgagcgggagctaatgctg
cacgctgctgatgtggaggccctgcaggagctgaagaaaagatcccagcaggaagcagct
aggaagagagaactggaggagcaactgaacaagaccacctccctcatgctggagaaaagt
gctgcctggaacacaatggagagacggctgaaggatgatttgtccagtcagagtcgtcgc
agtgaggaactggggaagcagaacactctcctgcacctgcagatggatgaaatggccaca
aagagtcgtcaacaacagcagcagcagcagcagcaccagcttgatctgtcattcagtgag
gaaggaaagaccactgaacagatactagaaatactcaggtttgtgcggagagagaaggag
atcgctatggctcgatgtgaggcgtctgagggagaagctctccgctacaaacagcgagtg
gagcaccaagacagggaactgaaggatctgcaggaagctgtgaacgctgagagggagaag
atgcaggtcacagcaaagactctggcccagcaggaggagcagctgaagaagattgagagt
atcggtgctctccaagaaaccaacaagatgctgaagatggacagagataaactggagcag
gagttgcagcaagctcaggctaaactgaccaagctccagtcagacatcagcccactgcat
cactctttgtctcagctgtcagagaagaatggctccctgcaggctgataagaggatactg
gaggaggacctcaaacgctgtagagccagagtgcagcaactggttagccagcagaaagac
ggtgatgttgaagagagacagaaagtcaccaccgagagagaagctcagcagagacgcatc
acacagctagctgaggagacagccaagctaaagactgagctggccagatccagtgccagc
agtaactcggcccagtctcagctgcaagccctcagagattctgtggcccgtctgacgtca
gagagagacaccctgaagaaagacctggaaacaaaaagcagcgacattcttgagaagaac
aagaccatcacccaggtgaagaagatcggacggcgctacaaaacccagtacgaggagctc
aaagcccagcatgacaagctggtggaggaaacagcagctaaagctggaagtgaggcaggt
tcaagccaggaagtgcagcaggagctgactaaagcccaggaggagctcaacaaggccaaa
gaggagctgaccacgctgaaagaggaggtgcagaaaaaacaggaggaggcccagaagtcc
cggcaggaatcggaggaggcccagaaggaaaaccagcagaacaaggacaagttccaggag
gtccaaaaccagctgacacagaaccagagccagctgacacaggtccagtctcaactgacc
cagacacagactcaacttcaacagaatcagaaccagctgacacagagccagaaagagctt
cagcaggccaagactcacagccagcagttacagaaccagttaaaatcagctcagtctcaa
gctcaggcccgtcagaaccagattcagcagatccagagggagctccagcaggccaaagac
accctccagcagaacctggctaatcagaaagagctacagcagacacaacaaaccagtcaa
cagagccacaaccaggaggtcaccaacctcaagactgctctgagccaagcagagagcaag
atgactgagctccaaggccaactggacagcctgcagaagacggttggtgagcgtgaagca
gacaacaagcgtctgcaggagcagctgaatgaagcaaaccaggccaacgaagcgagccga
gcgagttcccagtctatccaggctagtgatgctaacattgctagtgacgctaaccaggcg
ctacaagaggagctgtcaaaactcagacaggagctgtctgactgcaagaacagagaggag
cagctcagacagcagatggctgacaaagaggaaaaaactaagaaggccttcatgggagcc
aagaccaaaatcaaccaactaaacactgccaaggagcagctcagtcacgaggtcgaagaa
ctgaaacagaataaggaggacctggagatgaggatgagtgccctcaagtctcagtatgaa
ggacgacttcttcggctagacagagaactcagagaactgacagagacacagacacactct
gaccccagagaggaaccacaggaccagagtggatctaaggcggttgatccggccagatct
gcagaccagagacagatatctttgaagagtccagcccaagactggggaagctccagcctg
tctgagcctcccactgccaacatccgccccaccccaagtactccatctcctagcaacaag
ccaagcccctcccctggtagcaagaccacgccccgtgccagcatccggcctatggttacc
ccggcaaccatgcctgtgcccacacccactgccaccgtcatgccgaccacacagactgac
agccaagaggcagcctccgtacactctaccagtgccagtctggtgaacacacccacatcg
atgactcagccaaccagcactcagactacagcatttgttcagcccacccaacagcaggca
gccaatcaggatgccagctctagtgtggaggcagagcgaccatctacgtcttcctctctg
agtggaacagcaggttcaaagagaggcagagaggaggaggaggaggaagaggagagcaga
ccagagagctcacacacccctccaactaccaaaaaactacgactaagaacaacaatggcg
ccgcagatggaaggtgatgaggagatagaaggagagctaggggatgaaggagaaagacag
gattctccagatgacagtcaggagctccctgaagagagctttcccatcttagctgaagac
gacgaggacatcgagggagaaggcgtgtcccagtctgtcccctctgatcagatgtccctc
cagggctccactctgattcgggacgtcatcgtgattgacacagacagcgagagccgtgag
agcaaagacggggaggataagcaggaagatgacggtgaagaggaagaggaggaagaagaa
gaagaggaagaggaggagtataaggaggaagaggatgatgatgaagatgaggacgacgcc
ggtgacagtgagatgaggggaggagaggagagcaatgaagagagcagggaggctgaagaa
gaggaggaagaggagccgtcagaagccaccaacgctgaggagaacgtgtgtggagcgtcc
tcagactctcgccgtccctctgaaccgtcacacagtgaaggcagcagcagcgccgcatcg
gagtctgacccccccagagaccctgtacacctcgcccccacttcctccccttcctcttcc
tcactcacaccccgccttccccaaccccgtaggcccccacaccccctccctccacggctc
tacatccaacctccagctccagagctgggacccccacacacacagagacagtcctctcag
ctgcgccgaccatcaacaggacttcaacgtggtggacttcaactaacacctggaataggc
agtaatcaacatttcttcgatgatgacgacaggatggttcccagtactcccacactggta
gtcccacaccgaactgatggcttcgctgaggctatacattctcctcaggtggcaggtctg
tccaccaggttcaggtttggacctccagaggatctgctgcctcagacatcagcctcacac
tctgacctgggacagctggcctctcaaggaggtctgggtatgtatgagtctcctctgttc
ctggctgctcacgacgaggacggaggaggaaggagtgtccccaccacgcctctacaggtg
gctgcaccagtgacagtcttcacagagtccctgccctcagacagcgctgacaatatggca
tcccagtctgttcccatggtaactgcctccaccgggatggcctcggctgcagatgatgga
gatgaggtcttcatggagcaggaaggagagggccctgggattgagtcttctttggacagc
caggcagacatggagtcagcaggacagcagagtgatgatgcatcacttccatccaccagc
caagtccctgacaccagcagtcagcggcgcagtcagcctttgatcagcagcctgtcaggc
agaggaaccagaggagggaggggagaggccaggacgttactcagccgcagaggaactttt
gcacggggaaggggaggagccatgggtagagggagcctcctctag
DBGET
integrated database retrieval system
