Thunnus thynnus (Atlantic bluefin tuna): 137193663
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Entry
137193663 CDS
T11154
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137193663 (gapvd1)
Membrane trafficking [BR:
tty04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
137193663 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
137193663
NCBI-ProteinID:
XP_067461065
LinkDB
All DBs
Position
2:complement(14882155..14915789)
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AA seq
1475 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNSDVLKTAERLYRAAWIAKQQRINLDRLIL
TSAEASPAECCQHAKMLEDTQFVDGYKTLGFQETIYGEFVARLRENPRLVASCLVAGERL
NQEHTQGVIHTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLEIDPAKVTERLTPAQQERFGEKGSE
GYKQRVQAAVEANEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDADPR
RKSCLSKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTAVYITHNQLLALVDFVR
SVTAGDHLREEDHMALETLLANVPQSRTVKSNSLELTPSNTPQLSPATTPANKKNRLPIG
QHLAAITSWDPTTTTLSAHIPLVTPFAAARSRSRTNIAQEGEAEASSQESLQELMPEEVL
VISLGSGPQNVPGMMSENEVLNLQMADGAQGDGHADDTKLHGKPDKTLRFSLCSDNLEGI
SEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEI
RDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSLLCLPGSG
SVLLDPYGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGVGSTSDDTEVREV
SSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEESGHGSHHLTS
PPSQADSLLAMFDPLSSGEGSSTGTIVRPKVHYARPPHPPPDPPIPEASALGQETRHSLF
TPHCLAQAELEHTKQRHSFPDRLVRSRSSDIVCPGRRPTSDPGLNRRVAVEERDPAGAFA
LGPSSSPSKDSLKGETEDRKDSDDEKSDRNRPWWKKRFVSAIPKAPIAAFRKRDKQEKDD
IAQERIPQDDPLPRQSSQAQAAEDILDKYRNIKRTSPSDGAATGASYDGAGDLCVEDSVH
DSPREDTLQNISTDDLPDSASQTAQQHDSKFSFSDAKKKLRLALCSADSVALPIMTPATT
RNGLPDHMDPEDNEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVSRFDARTCRKLLAAI
AEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCVRLLLEHMES
KMLDFIKAFQGCTAADDKTAAVEDFLRYLYGAMARDAIWQYASEDQLQDAQMAIERSVMN
RIFKLAFYPNQDGDILRDQLFHEHIQRLSKVVTANHKALQIPEVYLKEAPWPSAQSEIRT
INAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIRANPPCLLSTVQ
YINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggagcggctgtatgtg
gcgtcggagaagcagctgatccagaggctcaacagtgatgtgctgaagacagctgagagg
ctctaccgggccgcctggatcgccaagcagcagaggatcaacctagatcgtctcattctc
accagtgcggaggcctctccagctgaatgctgccaacatgccaaaatgctggaagacaca
cagtttgttgatggctacaagactctgggcttccaggaaactatatatggcgagttcgtg
gcccggttgagggagaaccccagactggtggcgtcatgcctggtggcaggagagaggctg
aaccaggagcacacccagggggtcatccatacagtcttcacctcactttatggcaactgc
atcatgcaggaggatgagagctacctgctgcaggtgttgcggtacctgatagagtttgag
ctgaaggagagcgacaaccctcgccgtctgctgcgaaggggaacctgtgccttcagcatc
cttttcaagctcttctccgaaggcctgtattcagccaaactcttcctcactgccaccctc
catgaacccattatgcagctgctggtagaagatgaagaccatctagagattgacccagcc
aaggtgacagaacgtctcactccggcccagcaggagcgctttggggagaagggctctgag
ggatacaaacaaagggtgcaggcagctgtggaggccaatgaagccaagctggtagctctg
gtcaataagtttattggttacttgaagcagaacacctactgctttccccatagcctgcgc
tggattgtgtcccagatgtacaagacgttgtcatgtgtggagcgtcttgaggtgggtgaa
gtgcgcaccatgtgcacagacctgctgttgacctgcttcatctgcccagctatagtcaac
ccggagcagtatggtatcatctcagatgcccccatcaatgaagtggcccgcttcaatcta
atgcaggtggggcagcttttgcagcagttggccatggctgacgatgatgcagacccaagg
cggaaaagctgcttgtccaaatttgataagagttgtgtagctgcctttctggatgtggtg
attggaggacgagcagtcgagaccccacctatgtcctcaatgaaccttctggaaggccta
agcaggactgcagtctatattacgcataatcagctgctggcgctggtggactttgtgcgg
agcgtgacggcgggagaccaccttcgggaggaggaccacatggctctggagaccctgttg
gccaatgtgccccaatctcgaactgtgaagagcaacagtctggagctcaccccttccaac
accccccagctctccccggccaccactcctgccaacaagaagaacaggctccccatagga
caacacttagccgcaataacatcctgggaccccacaaccaccactctgtctgctcacatt
ccattagtaaccccttttgcagctgctcgtagccgcagccgtaccaacatagcccaggag
ggggaggcagaggccagctcccaagagtccctgcaggagctgatgccagaggaggtgctg
gtgatttcactaggatctggtcctcagaatgtccctgggatgatgtcagagaatgaggtt
ttgaacctgcagatggctgatggggcccaaggcgacggccatgctgatgacactaagctg
catggtaaaccagacaaaaccctgcgcttctccctctgcagtgacaacctggaaggcatc
tcagagggtccatctaatcgttctaactctgtatcatctctggacctcgagggagaatct
gtttctgagctgggagctggaccatcagggagcaatggggtggaggctctacagcttttg
gagcatgaacaggccaccactcaggacaacctggatgacaaactgcgcaaatttgagatc
agagacatgatgggcctgacagacgatcgggacatctctgagacagtcagtgaaacttgg
agcacggatgtactcggcagtgactttgatcccaacatggatgaagatcggctgcaggaa
atagcaggggcagctgcggagaacatgcttggcagcctgctgtgtcttcctggctcgggc
tcagtgctgctcgacccctatggctccacgatctcagagaccacaagcgaggcctggagt
gtggaggtcctgcctagtgactcagaagccccggacctgaagcaggaggagcggctgcag
gagctggagagctgctcaggtgttggcagcacctcagatgatacagaggtcagagaggtc
agctctagacccagcactccaggcctcagtgttgtctcaggtatcagtgcaacctctgaa
gacatccccaacaagatcgaggacctgcggtcagagtgcagctcagactttggaggaaag
gactctgtgaccagtccagatggggaggagtcaggccacggatcacaccatctgacatct
ccaccctcacaagctgattccttattggccatgtttgatcccctctcctccggtgaaggt
tcctccaccggaacaatagtgaggcccaaagtgcactacgccaggccccctcaccctccc
cccgaccctcccatccctgaagccagcgccctggggcaggagacgcgccactctctcttc
acgccccactgcttggcccaggctgagctggagcacactaagcagcgccactccttccct
gacaggctggtccgtagccgcagctctgacatcgtgtgcccaggccgccggcccacaagt
gaccccggccttaatcggcgggtagcagttgaagagcgtgaccctgccggggccttcgcg
ctaggaccgtcctcgtcccccagcaaggactccctgaaaggagagactgaggacagaaaa
gacagtgatgatgagaagtctgatcgcaacagaccatggtggaagaaacgttttgtgtca
gccattcctaaagctccaatagcagcatttcggaaaagggacaagcaggagaaagatgat
attgctcaggagcgaatcccacaagatgaccctttgcccagacagagctcacaagcccag
gcagctgaagacatcttggacaagtacaggaacatcaagaggaccagcccaagtgacgga
gccgcaactggagcttcttacgatggggcaggagatctttgtgttgaggacagcgtgcat
gactctccaagagaagacactctgcagaacatttccacagatgacctcccagactcagcc
agccagacagcacagcagcatgactccaagttctctttcagtgatgcaaagaagaagttg
aggttggcgttgtgttctgcagactcagtggctctgcccatcatgactcccgcaaccact
cgaaatgggctgcctgaccacatggaccctgaagacaatgagatcgtctgcttcctgaag
gtccagctagcagaggccatcaaccttcaggataagaaccagatggcccagatccaggag
accacgcgctgtgtcagccgtttcgacgcgcgtacctgccggaagctgctggctgctatt
gcggaggattacagaaagcgggcaccatacatagcctatctaaccaggtgtcgccagggc
ctgcagacctcacaggcccatctggagaggctcctccagagggtgctgagagataaggaa
gtggctaaccgctacttcaccactgtctgtgttcggctccttctcgaacacatggagtcc
aagatgcttgacttcattaaggcgttccaggggtgcacagcagctgatgacaagactgca
gcagtggaggattttctgcgctacttgtacggcgccatggcccgtgatgccatttggcag
tatgctagcgaggaccagctgcaggatgcccagatggctatcgagcgcagcgttatgaac
cgcatcttcaaactggccttctacccaaaccaagatggagatattctcagagaccagctt
ttccatgaacacatccagcggctctcaaaagttgtgacggccaatcataaagctcttcaa
atcccagaggtttacctgaaggaggctccttggccctctgcgcagtctgagatcaggacc
atcaatgcctacaagacaccaagagacaaagtccagtgtatactgcgcatgtgttccacc
attatgaacctcctcagtcttgcaaatgaagactctgtccctggagctgatgactttgtg
cctgtgctcgtctttgtcctcataagggcaaacccgccctgcctgctgtccaccgttcag
tacatcaataatttctacgccagccggctgagtggggaggagtgctattggtggatgcag
ttcaccgcggcggtggaattcattaagaccatcgacgatcgcaagtga
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