Thunnus thynnus (Atlantic bluefin tuna): 137194153
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Entry
137194153 CDS
T11154
Symbol
rc3h1b
Name
(RefSeq) roquin-1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tty03000
]
137194153 (rc3h1b)
04121 Ubiquitin system [BR:
tty04121
]
137194153 (rc3h1b)
Transcription factors [BR:
tty03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
137194153 (rc3h1b)
Ubiquitin system [BR:
tty04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137194153 (rc3h1b)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137194153
NCBI-ProteinID:
XP_067461863
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Position
12:complement(15272467..15290216)
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AA seq
1134 aa
AA seq
DB search
MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAISTD
IEQLPVNTALLQLVGGQVPKAQPVALISSPEDSQHYEEARQCVEELALYLKPLSNTRGVG
LSSTAQSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADPQQPPQHSKYKTYMCR
DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARLPGSGLMPDEGLPLDVAVTRKPSP
LTNGSSAPSLPQLIARGTDTVSYDVLRKPIKMDVGSPSAPGSPPDPLDSVPKPGMPLPPH
AMAHPRMPADHLSGVKQMPVVPRGSPVYPQPQLSDMFYPDTRPPPSGPQYEPTQYPPGYP
YQQPPQYVPRDYIRNPPPPSESGPPYHDPYPGYGPPERPYQAPHSGPPFSYPHPPHYDRN
RHGTYTGPPPPPQPYTSQRDGLVRMSPAPLDVPPQSAGQGNSLYHADANPRDRYPPDGYY
PQGAQPPPMRAYVRGPYSGSQPSLDYLHRRRQELLSQLEERKVISPPPFAASPTLSHPFP
SDYPPEYGEESSKTIGKGREPDYAGQYSPWSCETIGSYIGTKDAKPKDVMVPGTMEMMNV
EAKGLREPSLEAPRRGAEVKDDDPIIPFGPQPTVSRFGAISRTSKTGYQTTGPVQAMAST
PQNPNSKHMAMPEYTYGSHGGWGGASYPSHQTASSSQGHFSERLPMAATDREQLKIELQQ
VNQQINQQTQMHSMEAASNTLLLQREASALAGQPVQPSQGQAAAAQQQQQAKWPAGGASA
TAVSSEQLSLELHQVEREIGKRTREMAMENQVAHDVQQYKMKPAENGQPEHKTQLEEISL
ALGEVSNGSSSLQESAVGGSMLSLTNKTSALSLCSDPGATGSEMQKNGVVHSCS
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgcaagcaccacaatggacagagttcctgctgtgcccgatctgcacacagaca
tttgaggagactgttcgccggcccatcagcttgggctgtggacatactgtctgcaagatg
tgcctgaacaagttgcaccgtaaggcctgtccctttgaccagacagccatcagcacagac
atcgagcagctacctgtcaacacagccctgttgcagctggtgggaggccaggttcctaag
gctcagccagttgccttgatttccagtccagaggactcgcagcattatgaggaggccagg
cagtgtgtggaggagctggccctgtacctcaaacccctcagcaacacccgaggtgtgggt
ttgagcagcacggcccagagcatgctgagtcgacccatgcagaggaaactggtaactctg
gtccactgccagctggtggaagaggagggccgtgtgagagccatgagagctgcccgctct
ctgggcgagcgaactgtcaccgaactcatcttgcagcatcagaatccgcagcagctctcc
tccaatctgtgggctgctgtccgtgcacgaggatgtcagtttcttggcccagccatgcag
gaggaggctctgaagttagtccttcttgcactagaggatggttctgctctgtccaggaag
gtgttggttctctttgtagtccagaggcttgagcctcgcttcccgcaggcctctaagaca
agcataggccatgttgtgcagctcctctacagggcctcttgcttcaaggtgaccaaacgt
gatgaagattcatccctaatgcaactgaaagaagagttccgtacttacgaagctctgcgg
cgcgagcatgactctcagattgttcagattgccatggagggtgggctgcgcatcgcacct
gatcagtggtcttctctgttatatggagatcagtctcacaagtcacacatgcagtctatc
atagataagctgcagaccccagcgtcctttgctcagagtgttcaagagctaacgattgcg
ctacaaaggactggagacccagccaacctcaacaggctgcggcctcacctggaactactg
gccaacattgaccccagtcctgatgctccccctcccacatgggagcagctagagaagggg
ttggtagcagtgaagacagtggtgcatggcctggtagactttatccagaaccacagcaag
aaaggagctgaccctcaacagcctcctcagcacagcaagtacaaaacatacatgtgtcgt
gacatgaagcagaaggggggctgtcctcgtggagccagctgcacctttgctcactctcag
gaagaactggagaagtatcgtaagatgaataagcgcctggcagctcgcctccctggctca
gggctcatgccagatgaaggccttccccttgatgtagcagtgacccggaagccttcaccc
ctcaccaatgggagcagtgcaccctctttgccccagctcattgctcgtggcacagacaca
gtctcatatgacgtgttgcgtaaacccatcaagatggatgtagggagtcccagtgcccca
ggatcaccacctgatcccctggactctgtgcccaaacccggtatgcctctgccacctcat
gccatggcccaccccagaatgcctgcagaccacctctctggggtgaagcagatgcctgtg
gtacccagaggttcaccagtgtacccccagccacagctctctgacatgttctaccctgat
actcgcccaccaccttctggtcctcagtatgagcccacacaataccccccaggttacccc
taccaacagccaccacagtatgttcctcgggattacatccgtaaccctccaccccccagt
gagtcaggacccccttaccatgacccctaccctggctatggcccaccagagcgcccttac
caggctcctcactctggcccacccttctcctaccctcaccctccgcactatgaccgaaat
cgccacgggacctataccggcccaccacctcccccacagccttacacatctcagagggat
ggcctggtcagaatgagtcctgcacctctggatgttcccccacaatcagcagggcagggt
aactcactctaccacgcagatgccaatccccgggatagatacccaccagatggctactat
ccacaaggtgcccaacctccacccatgagggcttatgtcagggggccatatagtggttcc
cagcccagcctggactacctgcaccgacgtcggcaggagctgttatcccagctggaggaa
aggaaggtcatctcccctccaccatttgctgcctccccaactctttctcatcccttcccc
agcgactaccctcctgagtatggtgaagagagctccaaaaccatagggaaaggcagagag
cctgactacgctgggcaatactctccctggtcttgtgaaaccattggctcctacattggc
acaaaggacgccaaacccaaagatgttatggttcctggaaccatggagatgatgaatgtt
gaggccaagggtctgagggaaccatcgcttgaggcccctcgtaggggtgccgaagtcaag
gacgatgaccctattatcccgtttggaccccagcccactgtatcacgctttggtgccatc
tcccgcacctcaaagacgggctatcagactaccggccctgtacaggccatggcctccact
ccccagaacccaaactctaaacacatggcaatgccagaatacacatatggaagccatgga
ggatggggtggagcttcatacccctcccaccagactgcctcctcctctcagggacacttt
agtgagcgcctgcctatggcagccacagacagagaacaattaaagattgagctgcagcag
gtcaaccagcagattaaccaacagacccagatgcacagcatggaggctgccagtaacacc
ttactgctgcagagggaggccagtgcattggcaggtcagcctgtgcagcccagccagggt
caggcagcagcagcccagcagcagcaacaggccaagtggccagcagggggagcaagtgca
acagctgtctctagtgaacagctaagcctggagctccaccaggtggagagagagattgga
aaaaggacccgcgagatggccatggaaaaccaagtagctcatgatgttcagcagtacaag
atgaaacctgcagagaatggacaaccagagcacaagactcagctggaagaaatctccctg
gctcttggcgaggtgtcaaacggctccagcagtctgcaagaaagtgcagtgggcgggtcc
atgctgtcactgaccaataagacgtctgcgttgagcctgtgttctgatccaggcgccact
ggttcagagatgcagaagaatggcgtcgtccattcctgctcttag
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